RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 THEGLP0DJG4 465 aa11.51□□□□□ -0.57
RAPGEF1-207ENST00000481260 CR2P20023 1033 aa11.51□□□□□ -0.57
RAPGEF1-207ENST00000481260 HNRNPA2B1P22626 353 aaKnown RBP11.51□□□□□ -0.57
RAPGEF1-207ENST00000481260 FECHP22830 423 aa11.51□□□□□ -0.57
RAPGEF1-207ENST00000481260 IGFALSP35858 605 aa11.51□□□□□ -0.57
RAPGEF1-207ENST00000481260 CCT8P50990 548 aa11.51□□□□□ -0.57
RAPGEF1-207ENST00000481260 RPS21P63220 83 aaKnown RBP11.51□□□□□ -0.57
RAPGEF1-207ENST00000481260 GALNT2Q10471 571 aa11.51□□□□□ -0.57
RAPGEF1-207ENST00000481260 TRAF2Q12933 501 aa11.51□□□□□ -0.57
RAPGEF1-207ENST00000481260 STAT4Q14765 748 aa11.51□□□□□ -0.57
RAPGEF1-207ENST00000481260 PAFAH1B3Q15102 231 aaKnown RBP11.51□□□□□ -0.57
RAPGEF1-207ENST00000481260 TRIP6Q15654 476 aaKnown RBP11.51□□□□□ -0.57
RAPGEF1-207ENST00000481260 HADHQ16836 314 aaKnown RBP11.51□□□□□ -0.57
RAPGEF1-207ENST00000481260 TMCO4Q5TGY1 634 aa11.51□□□□□ -0.57
RAPGEF1-207ENST00000481260 NEK5Q6P3R8 708 aa11.51□□□□□ -0.57
RAPGEF1-207ENST00000481260 IL27RAQ6UWB1 636 aa11.51□□□□□ -0.57
RAPGEF1-207ENST00000481260 Q6ZSR6 202 aa11.51□□□□□ -0.57
RAPGEF1-207ENST00000481260 MTERF4Q7Z6M4 381 aaKnown RBP11.51□□□□□ -0.57
RAPGEF1-207ENST00000481260 ABI3BPQ7Z7G0 1075 aa11.51□□□□□ -0.57
RAPGEF1-207ENST00000481260 PELI3Q8N2H9 469 aa11.51□□□□□ -0.57
RAPGEF1-207ENST00000481260 ATPAF2Q8N5M1 289 aa11.51□□□□□ -0.57
RAPGEF1-207ENST00000481260 PLD5Q8N7P1 536 aa11.51□□□□□ -0.57
RAPGEF1-207ENST00000481260 SAP25Q8TEE9 199 aa11.51□□□□□ -0.57
RAPGEF1-207ENST00000481260 RNF25Q96BH1 459 aaPredicted RBP11.51□□□□□ -0.57
RAPGEF1-207ENST00000481260 CNTNAP3BQ96NU0 1288 aa11.51□□□□□ -0.57
RAPGEF1-207ENST00000481260 PSKH2Q96QS6 385 aa11.51□□□□□ -0.57
RAPGEF1-207ENST00000481260 OSBPL1AQ9BXW6 950 aa11.51□□□□□ -0.57
RAPGEF1-207ENST00000481260 CEP41Q9BYV8 373 aa11.51□□□□□ -0.57
RAPGEF1-207ENST00000481260 CNTNAP3Q9BZ76 1288 aa11.51□□□□□ -0.57
RAPGEF1-207ENST00000481260 CPEB1Q9BZB8 566 aaKnown RBP11.51□□□□□ -0.57
RAPGEF1-207ENST00000481260 TCEAL2Q9H3H9 227 aaPredicted RBP11.51□□□□□ -0.57
RAPGEF1-207ENST00000481260 NT5MQ9NPB1 228 aa11.51□□□□□ -0.57
RAPGEF1-207ENST00000481260 GDF3Q9NR23 364 aa11.51□□□□□ -0.57
RAPGEF1-207ENST00000481260 DKK3Q9UBP4 350 aa11.51□□□□□ -0.57
RAPGEF1-207ENST00000481260 TRIM10Q9UDY6 481 aa11.51□□□□□ -0.57
RAPGEF1-207ENST00000481260 DMTF1Q9Y222 760 aa11.51□□□□□ -0.57
RAPGEF1-207ENST00000481260 LAMA5O15230 3695 aa11.51□□□□□ -0.57
RAPGEF1-207ENST00000481260 MAP1BP46821 2468 aaKnown RBP11.5□□□□□ -0.57
RAPGEF1-207ENST00000481260 TRPM6Q9BX84 2022 aa11.5□□□□□ -0.57
RAPGEF1-207ENST00000481260 USP24Q9UPU5 2620 aa11.5□□□□□ -0.57
RAPGEF1-207ENST00000481260 SCAMP1O15126 338 aa11.5□□□□□ -0.57
RAPGEF1-207ENST00000481260 KRT1P04264 644 aa11.5□□□□□ -0.57
RAPGEF1-207ENST00000481260 ZNF883P0CG24 379 aa11.5□□□□□ -0.57
RAPGEF1-207ENST00000481260 EPHA8P29322 1005 aaPredicted RBP11.5□□□□□ -0.57
RAPGEF1-207ENST00000481260 AKT2P31751 481 aa11.5□□□□□ -0.57
RAPGEF1-207ENST00000481260 GARSP41250 739 aaKnown RBP11.5□□□□□ -0.57
RAPGEF1-207ENST00000481260 NOP2P46087 812 aaKnown RBP11.5□□□□□ -0.57
RAPGEF1-207ENST00000481260 ZNF135P52742 658 aaPredicted RBP11.5□□□□□ -0.57
RAPGEF1-207ENST00000481260 DYNLT1P63172 113 aa11.5□□□□□ -0.57
RAPGEF1-207ENST00000481260 DSC2Q02487 901 aa11.5□□□□□ -0.57
RAPGEF1-207ENST00000481260 NIPAL4Q0D2K0 466 aa11.5□□□□□ -0.57
RAPGEF1-207ENST00000481260 DNAJC3Q13217 504 aa11.5□□□□□ -0.57
RAPGEF1-207ENST00000481260 SLC14A1Q13336 389 aa11.5□□□□□ -0.57
RAPGEF1-207ENST00000481260 FZD2Q14332 565 aa11.5□□□□□ -0.57
RAPGEF1-207ENST00000481260 TCEAL1Q15170 157 aa11.5□□□□□ -0.57
RAPGEF1-207ENST00000481260 TCEA2Q15560 299 aa11.5□□□□□ -0.57
RAPGEF1-207ENST00000481260 UGP2Q16851 508 aa11.5□□□□□ -0.57
RAPGEF1-207ENST00000481260 CCDC157Q569K6 752 aa11.5□□□□□ -0.57
RAPGEF1-207ENST00000481260 KIAA1161Q6NSJ0 714 aa11.5□□□□□ -0.57
RAPGEF1-207ENST00000481260 MFSD7Q6UXD7 560 aa11.5□□□□□ -0.57
RAPGEF1-207ENST00000481260 RFLNAQ6ZTI6 216 aa11.5□□□□□ -0.57
RAPGEF1-207ENST00000481260 PTAR1Q7Z6K3 402 aaPredicted RBP11.5□□□□□ -0.57
RAPGEF1-207ENST00000481260 SLC25A45Q8N413 288 aa11.5□□□□□ -0.57
RAPGEF1-207ENST00000481260 CHCHD4Q8N4Q1 142 aa11.5□□□□□ -0.57
RAPGEF1-207ENST00000481260 LZTR1Q8N653 840 aa11.5□□□□□ -0.57
RAPGEF1-207ENST00000481260 EID2Q8N6I1 236 aa11.5□□□□□ -0.57
RAPGEF1-207ENST00000481260 TP53I13Q8NBR0 393 aaPredicted RBP11.5□□□□□ -0.57
RAPGEF1-207ENST00000481260 PLA2G15Q8NCC3 412 aa11.5□□□□□ -0.57
RAPGEF1-207ENST00000481260 RHBDD1Q8TEB9 315 aa11.5□□□□□ -0.57
RAPGEF1-207ENST00000481260 KRT35Q92764 455 aa11.5□□□□□ -0.57
RAPGEF1-207ENST00000481260 CENPTQ96BT3 561 aa11.5□□□□□ -0.57
RAPGEF1-207ENST00000481260 ECHDC3Q96DC8 303 aa11.5□□□□□ -0.57
RAPGEF1-207ENST00000481260 KLHDC7BQ96G42 594 aa11.5□□□□□ -0.57
RAPGEF1-207ENST00000481260 LRIG1Q96JA1 1093 aa11.5□□□□□ -0.57
RAPGEF1-207ENST00000481260 FEM1CQ96JP0 617 aa11.5□□□□□ -0.57
RAPGEF1-207ENST00000481260 PDLIM2Q96JY6 352 aa11.5□□□□□ -0.57
RAPGEF1-207ENST00000481260 PKNOX2Q96KN3 472 aa11.5□□□□□ -0.57
RAPGEF1-207ENST00000481260 RNF157Q96PX1 679 aa11.5□□□□□ -0.57
RAPGEF1-207ENST00000481260 LGMNQ99538 433 aa11.5□□□□□ -0.57
RAPGEF1-207ENST00000481260 MGME1Q9BQP7 344 aa11.5□□□□□ -0.57
RAPGEF1-207ENST00000481260 ZNF670Q9BS34 389 aa11.5□□□□□ -0.57
RAPGEF1-207ENST00000481260 HERPUD2Q9BSE4 406 aa11.5□□□□□ -0.57
RAPGEF1-207ENST00000481260 LACRTQ9GZZ8 138 aa11.5□□□□□ -0.57
RAPGEF1-207ENST00000481260 BRD8Q9H0E9 1235 aa11.5□□□□□ -0.57
RAPGEF1-207ENST00000481260 GPR27Q9NS67 375 aa11.5□□□□□ -0.57
RAPGEF1-207ENST00000481260 DTLQ9NZJ0 730 aa11.5□□□□□ -0.57
RAPGEF1-207ENST00000481260 RCOR3Q9P2K3 495 aaPredicted RBP11.5□□□□□ -0.57
RAPGEF1-207ENST00000481260 SAE1Q9UBE0 346 aaPredicted RBP11.5□□□□□ -0.57
RAPGEF1-207ENST00000481260 SEPT3Q9UH03 358 aa11.5□□□□□ -0.57
RAPGEF1-207ENST00000481260 KLK13Q9UKR3 277 aa11.5□□□□□ -0.57
RAPGEF1-207ENST00000481260 ZFHX4Q86UP3 3567 aa11.49□□□□□ -0.57
RAPGEF1-207ENST00000481260 SHROOM3Q8TF72 1996 aa11.49□□□□□ -0.57
RAPGEF1-207ENST00000481260 TRIM38O00635 465 aa11.49□□□□□ -0.57
RAPGEF1-207ENST00000481260 RIOK3O14730 519 aaKnown RBP11.49□□□□□ -0.57
RAPGEF1-207ENST00000481260 CASC3O15234 703 aaKnown RBP11.49□□□□□ -0.57
RAPGEF1-207ENST00000481260 TSPAN6O43657 245 aa11.49□□□□□ -0.57
RAPGEF1-207ENST00000481260 ZNF500O60304 480 aaPredicted RBP11.49□□□□□ -0.57
RAPGEF1-207ENST00000481260 PCDHGA12O60330 932 aa11.49□□□□□ -0.57
RAPGEF1-207ENST00000481260 HLA-DQB2P05538 268 aa11.49□□□□□ -0.57
RAPGEF1-207ENST00000481260 FTH1P19P0C7X4 201 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms