RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 BYSLQ13895 437 aaKnown RBP12.36□□□□□ -0.43
TRA2B-212ENST00000480461 ZNF235Q14590 738 aa12.36□□□□□ -0.43
TRA2B-212ENST00000480461 TCEAL6Q6IPX3 200 aa12.36□□□□□ -0.43
TRA2B-212ENST00000480461 GDPD4Q6W3E5 623 aa12.36□□□□□ -0.43
TRA2B-212ENST00000480461 KBTBD6Q86V97 674 aa12.36□□□□□ -0.43
TRA2B-212ENST00000480461 ZSCAN30Q86W11 494 aa12.36□□□□□ -0.43
TRA2B-212ENST00000480461 SPATA22Q8NHS9 363 aa12.36□□□□□ -0.43
TRA2B-212ENST00000480461 CCDC110Q8TBZ0 833 aa12.36□□□□□ -0.43
TRA2B-212ENST00000480461 NSMCE1Q8WV22 266 aa12.36□□□□□ -0.43
TRA2B-212ENST00000480461 TCEAL3Q969E4 200 aa12.36□□□□□ -0.43
TRA2B-212ENST00000480461 FAM131CQ96AQ9 280 aa12.36□□□□□ -0.43
TRA2B-212ENST00000480461 CAPZA3Q96KX2 299 aa12.36□□□□□ -0.43
TRA2B-212ENST00000480461 KLHL32Q96NJ5 620 aa12.36□□□□□ -0.43
TRA2B-212ENST00000480461 SMIM14Q96QK8 99 aa12.36□□□□□ -0.43
TRA2B-212ENST00000480461 GLOD4Q9HC38 313 aa12.36□□□□□ -0.43
TRA2B-212ENST00000480461 BCCIPQ9P287 314 aaKnown RBP eCLIP12.36□□□□□ -0.43
TRA2B-212ENST00000480461 DRG1Q9Y295 367 aaKnown RBP12.36□□□□□ -0.43
TRA2B-212ENST00000480461 PCDHGA5Q9Y5G8 931 aa12.36□□□□□ -0.43
TRA2B-212ENST00000480461 DSPP15924 2871 aaKnown RBP12.36□□□□□ -0.43
TRA2B-212ENST00000480461 NBEAQ8NFP9 2946 aa12.36□□□□□ -0.43
TRA2B-212ENST00000480461 ITPR1Q14643 2758 aa12.35□□□□□ -0.43
TRA2B-212ENST00000480461 SDK1Q7Z5N4 2213 aa12.35□□□□□ -0.43
TRA2B-212ENST00000480461 IGHV1OR15-9A0A0B4J2B8 117 aa12.35□□□□□ -0.43
TRA2B-212ENST00000480461 A0A1W2PP55 124 aa12.35□□□□□ -0.43
TRA2B-212ENST00000480461 C5orf60A6NFR6 353 aa12.35□□□□□ -0.43
TRA2B-212ENST00000480461 SRRM3A6NNA2 597 aaPredicted RBP12.35□□□□□ -0.43
TRA2B-212ENST00000480461 C10orf142B7Z368 130 aa12.35□□□□□ -0.43
TRA2B-212ENST00000480461 F5H423 210 aaPredicted RBP12.35□□□□□ -0.43
TRA2B-212ENST00000480461 PGRMC1O00264 195 aaKnown RBP12.35□□□□□ -0.43
TRA2B-212ENST00000480461 KPNA3O00505 521 aaPredicted RBP12.35□□□□□ -0.43
TRA2B-212ENST00000480461 SPINT1O43278 529 aa12.35□□□□□ -0.43
TRA2B-212ENST00000480461 RPP40O75818 363 aaKnown RBP12.35□□□□□ -0.43
TRA2B-212ENST00000480461 ALDH1A2O94788 518 aa12.35□□□□□ -0.43
TRA2B-212ENST00000480461 PRLP01236 227 aa12.35□□□□□ -0.43
TRA2B-212ENST00000480461 IGLV3-19P01714 112 aa12.35□□□□□ -0.43
TRA2B-212ENST00000480461 PDHA1P08559 390 aa12.35□□□□□ -0.43
TRA2B-212ENST00000480461 ZSCAN5DPP0CG00 497 aa12.35□□□□□ -0.43
TRA2B-212ENST00000480461 NFKB1P19838 968 aa12.35□□□□□ -0.43
TRA2B-212ENST00000480461 C5AR1P21730 350 aa12.35□□□□□ -0.43
TRA2B-212ENST00000480461 BCKDHBP21953 392 aa12.35□□□□□ -0.43
TRA2B-212ENST00000480461 ACSL1P33121 698 aa12.35□□□□□ -0.43
TRA2B-212ENST00000480461 HSPA9P38646 679 aaKnown RBP12.35□□□□□ -0.43
TRA2B-212ENST00000480461 MPLP40238 635 aa12.35□□□□□ -0.43
TRA2B-212ENST00000480461 ZBTB16Q05516 673 aa12.35□□□□□ -0.43
TRA2B-212ENST00000480461 ITKQ08881 620 aa12.35□□□□□ -0.43
TRA2B-212ENST00000480461 TRAF2Q12933 501 aa12.35□□□□□ -0.43
TRA2B-212ENST00000480461 CYP1B1Q16678 543 aa12.35□□□□□ -0.43
TRA2B-212ENST00000480461 ZNF805Q5CZA5 627 aa12.35□□□□□ -0.43
TRA2B-212ENST00000480461 ANKRD20A2Q5SQ80 823 aa12.35□□□□□ -0.43
TRA2B-212ENST00000480461 PIP5KL1Q5T9C9 394 aa12.35□□□□□ -0.43
TRA2B-212ENST00000480461 ANKRD20A1Q5TYW2 823 aa12.35□□□□□ -0.43
TRA2B-212ENST00000480461 ANKRD20A3Q5VUR7 823 aa12.35□□□□□ -0.43
TRA2B-212ENST00000480461 DRICH1Q6PGQ1 229 aaPredicted RBP12.35□□□□□ -0.43
TRA2B-212ENST00000480461 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.35□□□□□ -0.43
TRA2B-212ENST00000480461 PID1Q7Z2X4 250 aa12.35□□□□□ -0.43
TRA2B-212ENST00000480461 FAM124AQ86V42 546 aa12.35□□□□□ -0.43
TRA2B-212ENST00000480461 CDKL3Q8IVW4 592 aaPredicted RBP12.35□□□□□ -0.43
TRA2B-212ENST00000480461 HDDC3Q8N4P3 179 aa12.35□□□□□ -0.43
TRA2B-212ENST00000480461 GATA6Q92908 595 aa12.35□□□□□ -0.43
TRA2B-212ENST00000480461 IMP4Q96G21 291 aaKnown RBP12.35□□□□□ -0.43
TRA2B-212ENST00000480461 OXNAD1Q96HP4 312 aaPredicted RBP12.35□□□□□ -0.43
TRA2B-212ENST00000480461 POLR1EQ9GZS1 481 aaKnown RBP12.35□□□□□ -0.43
TRA2B-212ENST00000480461 SUV39H2Q9H5I1 410 aa12.35□□□□□ -0.43
TRA2B-212ENST00000480461 FBRSQ9HAH7 460 aa12.35□□□□□ -0.43
TRA2B-212ENST00000480461 SCUBE2Q9NQ36 999 aa12.35□□□□□ -0.43
TRA2B-212ENST00000480461 FBXL12Q9NXK8 326 aa12.35□□□□□ -0.43
TRA2B-212ENST00000480461 AMACRQ9UHK6 382 aa12.35□□□□□ -0.43
TRA2B-212ENST00000480461 CYP8B1Q9UNU6 501 aa12.35□□□□□ -0.43
TRA2B-212ENST00000480461 FARP1Q9Y4F1 1045 aaPredicted RBP12.35□□□□□ -0.43
TRA2B-212ENST00000480461 SETXQ7Z333 2677 aaKnown RBP12.34□□□□□ -0.43
TRA2B-212ENST00000480461 SHROOM3Q8TF72 1996 aa12.34□□□□□ -0.43
TRA2B-212ENST00000480461 DMXL2Q8TDJ6 3036 aa12.34□□□□□ -0.43
TRA2B-212ENST00000480461 LAMA5O15230 3695 aa12.34□□□□□ -0.43
TRA2B-212ENST00000480461 C16orf96A6NNT2 1141 aa12.34□□□□□ -0.43
TRA2B-212ENST00000480461 MTSS1O43312 755 aa12.34□□□□□ -0.43
TRA2B-212ENST00000480461 HTRA2O43464 458 aaPredicted RBP12.34□□□□□ -0.43
TRA2B-212ENST00000480461 FZD6O60353 706 aa12.34□□□□□ -0.43
TRA2B-212ENST00000480461 RNASEH1O60930 286 aaKnown RBP12.34□□□□□ -0.43
TRA2B-212ENST00000480461 GCATO75600 419 aa12.34□□□□□ -0.43
TRA2B-212ENST00000480461 RNASEH2AO75792 299 aaKnown RBP12.34□□□□□ -0.43
TRA2B-212ENST00000480461 METTL18O95568 372 aa12.34□□□□□ -0.43
TRA2B-212ENST00000480461 TOP3BO95985 862 aaKnown RBP12.34□□□□□ -0.43
TRA2B-212ENST00000480461 MT-CYBP00156 380 aaPredicted RBP12.34□□□□□ -0.43
TRA2B-212ENST00000480461 DNTTP04053 509 aa12.34□□□□□ -0.43
TRA2B-212ENST00000480461 PRNPP04156 253 aa12.34□□□□□ -0.43
TRA2B-212ENST00000480461 ITGAVP06756 1048 aa12.34□□□□□ -0.43
TRA2B-212ENST00000480461 CD86P42081 329 aa12.34□□□□□ -0.43
TRA2B-212ENST00000480461 AP1S1P61966 158 aa12.34□□□□□ -0.43
TRA2B-212ENST00000480461 LRRC73Q5JTD7 316 aa12.34□□□□□ -0.43
TRA2B-212ENST00000480461 AGBL4Q5VU57 503 aa12.34□□□□□ -0.43
TRA2B-212ENST00000480461 PARS2Q7L3T8 475 aaKnown RBP12.34□□□□□ -0.43
TRA2B-212ENST00000480461 DSG4Q86SJ6 1040 aa12.34□□□□□ -0.43
TRA2B-212ENST00000480461 DEFB119Q8N690 84 aa12.34□□□□□ -0.43
TRA2B-212ENST00000480461 MAGOHBQ96A72 148 aaKnown RBP12.34□□□□□ -0.43
TRA2B-212ENST00000480461 ECHDC3Q96DC8 303 aa12.34□□□□□ -0.43
TRA2B-212ENST00000480461 RTP4Q96DX8 246 aa12.34□□□□□ -0.43
TRA2B-212ENST00000480461 LRIG1Q96JA1 1093 aa12.34□□□□□ -0.43
TRA2B-212ENST00000480461 CCDC114Q96M63 670 aa12.34□□□□□ -0.43
TRA2B-212ENST00000480461 ZNF641Q96N77 438 aaPredicted RBP12.34□□□□□ -0.43
TRA2B-212ENST00000480461 TUBGCP5Q96RT8 1024 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms