RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 SCN8AQ9UQD0 1980 aa16.27■□□□□ 0.2
DDX56-210ENST00000479440 CD160O95971 181 aa16.27■□□□□ 0.2
DDX56-210ENST00000479440 CR2P20023 1033 aa16.27■□□□□ 0.2
DDX56-210ENST00000479440 SCNN1AP37088 669 aa16.27■□□□□ 0.2
DDX56-210ENST00000479440 POLE2P56282 527 aa16.27■□□□□ 0.2
DDX56-210ENST00000479440 SRP54P61011 504 aaKnown RBP16.27■□□□□ 0.2
DDX56-210ENST00000479440 ELP6Q0PNE2 266 aa16.27■□□□□ 0.2
DDX56-210ENST00000479440 FAM102AQ5T9C2 384 aaPredicted RBP16.27■□□□□ 0.2
DDX56-210ENST00000479440 SMYD5Q6GMV2 418 aa16.27■□□□□ 0.2
DDX56-210ENST00000479440 TRIM65Q6PJ69 517 aa16.27■□□□□ 0.2
DDX56-210ENST00000479440 RD3Q7Z3Z2 195 aa16.27■□□□□ 0.2
DDX56-210ENST00000479440 SPRED1Q7Z699 444 aa16.27■□□□□ 0.2
DDX56-210ENST00000479440 PTRH1Q86Y79 214 aaKnown RBP16.27■□□□□ 0.2
DDX56-210ENST00000479440 SLITRK4Q8IW52 837 aa16.27■□□□□ 0.2
DDX56-210ENST00000479440 NELFBQ8WX92 580 aa16.27■□□□□ 0.2
DDX56-210ENST00000479440 GDAP1L1Q96MZ0 367 aa16.27■□□□□ 0.2
DDX56-210ENST00000479440 WRAP53Q9BUR4 548 aaKnown RBP16.27■□□□□ 0.2
DDX56-210ENST00000479440 TMPRSS4Q9NRS4 437 aa16.27■□□□□ 0.2
DDX56-210ENST00000479440 APEX2Q9UBZ4 518 aa16.27■□□□□ 0.2
DDX56-210ENST00000479440 ANAPC2Q9UJX6 822 aa16.27■□□□□ 0.2
DDX56-210ENST00000479440 BOD1L1Q8NFC6 3051 aa16.27■□□□□ 0.19
DDX56-210ENST00000479440 AGRPO00253 132 aa16.26■□□□□ 0.19
DDX56-210ENST00000479440 IGSF6O95976 241 aa16.26■□□□□ 0.19
DDX56-210ENST00000479440 TNFP01375 233 aa16.26■□□□□ 0.19
DDX56-210ENST00000479440 CD44P16070 742 aaKnown RBP16.26■□□□□ 0.19
DDX56-210ENST00000479440 XPAP23025 273 aaPredicted RBP16.26■□□□□ 0.19
DDX56-210ENST00000479440 ACVRL1P37023 503 aa16.26■□□□□ 0.19
DDX56-210ENST00000479440 CASRP41180 1078 aa16.26■□□□□ 0.19
DDX56-210ENST00000479440 MAPKAPK2P49137 400 aa16.26■□□□□ 0.19
DDX56-210ENST00000479440 SUOXP51687 545 aa16.26■□□□□ 0.19
DDX56-210ENST00000479440 FOXK1P85037 733 aa16.26■□□□□ 0.19
DDX56-210ENST00000479440 MYLK3Q32MK0 819 aa16.26■□□□□ 0.19
DDX56-210ENST00000479440 GJB7Q6PEY0 223 aa16.26■□□□□ 0.19
DDX56-210ENST00000479440 SHC3Q92529 594 aa16.26■□□□□ 0.19
DDX56-210ENST00000479440 PDXPQ96GD0 296 aa16.26■□□□□ 0.19
DDX56-210ENST00000479440 WDR92Q96MX6 357 aa16.26■□□□□ 0.19
DDX56-210ENST00000479440 RBM15Q96T37 977 aaKnown RBP eCLIP16.26■□□□□ 0.194e-12■■■■□ 21.5
DDX56-210ENST00000479440 RETREG1Q9H6L5 497 aa16.26■□□□□ 0.19
DDX56-210ENST00000479440 CTNND2Q9UQB3 1225 aa16.26■□□□□ 0.19
DDX56-210ENST00000479440 ZSCAN5CA6NGD5 496 aaPredicted RBP16.25■□□□□ 0.19
DDX56-210ENST00000479440 SERINC3Q13530 473 aa16.25■□□□□ 0.19
DDX56-210ENST00000479440 ARHGEF7Q14155 803 aa16.25■□□□□ 0.19
DDX56-210ENST00000479440 SKIDA1Q1XH10 827 aa16.25■□□□□ 0.19
DDX56-210ENST00000479440 WSCD2Q2TBF2 565 aa16.25■□□□□ 0.19
DDX56-210ENST00000479440 C14orf28Q4W4Y0 310 aa16.25■□□□□ 0.19
DDX56-210ENST00000479440 FAM131BQ86XD5 332 aa16.25■□□□□ 0.19
DDX56-210ENST00000479440 GPBAR1Q8TDU6 330 aa16.25■□□□□ 0.19
DDX56-210ENST00000479440 CATSPER2Q96P56 530 aa16.25■□□□□ 0.19
DDX56-210ENST00000479440 APOOQ9BUR5 198 aa16.25■□□□□ 0.19
DDX56-210ENST00000479440 SLC12A9Q9BXP2 914 aa16.25■□□□□ 0.19
DDX56-210ENST00000479440 GDPD2Q9HCC8 539 aa16.25■□□□□ 0.19
DDX56-210ENST00000479440 LRIT1Q9P2V4 623 aa16.25■□□□□ 0.19
DDX56-210ENST00000479440 DKK3Q9UBP4 350 aa16.25■□□□□ 0.19
DDX56-210ENST00000479440 DGKBQ9Y6T7 804 aa16.25■□□□□ 0.19
DDX56-210ENST00000479440 LRP4O75096 1905 aa16.24■□□□□ 0.19
DDX56-210ENST00000479440 GOLGA6L4A6NEF3 574 aa16.24■□□□□ 0.19
DDX56-210ENST00000479440 B4DGG1 531 aa16.24■□□□□ 0.19
DDX56-210ENST00000479440 HGSO14964 777 aaPredicted RBP16.24■□□□□ 0.19
DDX56-210ENST00000479440 NUDT21O43809 227 aaKnown RBP16.24■□□□□ 0.19
DDX56-210ENST00000479440 RAMP2O60895 175 aa16.24■□□□□ 0.19
DDX56-210ENST00000479440 FGFR1OPO95684 399 aaKnown RBP16.24■□□□□ 0.19
DDX56-210ENST00000479440 PCCBP05166 539 aa16.24■□□□□ 0.19
DDX56-210ENST00000479440 CCR10P46092 362 aa16.24■□□□□ 0.19
DDX56-210ENST00000479440 MTM1Q13496 603 aa16.24■□□□□ 0.19
DDX56-210ENST00000479440 HLTFQ14527 1009 aaKnown RBP eCLIP16.24■□□□□ 0.19
DDX56-210ENST00000479440 TMEM52BQ4KMG9 183 aa16.24■□□□□ 0.19
DDX56-210ENST00000479440 ARTNQ5T4W7 220 aa16.24■□□□□ 0.19
DDX56-210ENST00000479440 ATXN7L2Q5T6C5 722 aaPredicted RBP16.24■□□□□ 0.19
DDX56-210ENST00000479440 ISM2Q6H9L7 571 aa16.24■□□□□ 0.19
DDX56-210ENST00000479440 TAF8Q7Z7C8 310 aa16.24■□□□□ 0.19
DDX56-210ENST00000479440 FAM26EQ8N5C1 309 aa16.24■□□□□ 0.19
DDX56-210ENST00000479440 IL22RA1Q8N6P7 574 aa16.24■□□□□ 0.19
DDX56-210ENST00000479440 TMEM35BQ8NCS4 154 aa16.24■□□□□ 0.19
DDX56-210ENST00000479440 KIAA1524Q8TCG1 905 aa16.24■□□□□ 0.19
DDX56-210ENST00000479440 NCAPGQ9BPX3 1015 aa16.24■□□□□ 0.19
DDX56-210ENST00000479440 CRACR2AQ9BSW2 395 aa16.24■□□□□ 0.19
DDX56-210ENST00000479440 MAGEH1Q9H213 219 aa16.24■□□□□ 0.19
DDX56-210ENST00000479440 PDCL3Q9H2J4 239 aa16.24■□□□□ 0.19
DDX56-210ENST00000479440 MAN1B1Q9UKM7 699 aa16.24■□□□□ 0.19
DDX56-210ENST00000479440 COQ6Q9Y2Z9 468 aa16.24■□□□□ 0.19
DDX56-210ENST00000479440 ZDHHC9Q9Y397 364 aa16.24■□□□□ 0.19
DDX56-210ENST00000479440 OR1A2Q9Y585 309 aa16.24■□□□□ 0.19
DDX56-210ENST00000479440 CLEC18AA5D8T8 446 aa16.23■□□□□ 0.19
DDX56-210ENST00000479440 ZW10O43264 779 aa16.23■□□□□ 0.19
DDX56-210ENST00000479440 TMCC1O94876 653 aa16.23■□□□□ 0.19
DDX56-210ENST00000479440 CPNE6O95741 557 aa16.23■□□□□ 0.19
DDX56-210ENST00000479440 RHOQP17081 205 aa16.23■□□□□ 0.19
DDX56-210ENST00000479440 RHOAP61586 193 aa16.23■□□□□ 0.19
DDX56-210ENST00000479440 NRG1Q02297 640 aaPredicted RBP16.23■□□□□ 0.19
DDX56-210ENST00000479440 INPP5AQ14642 412 aa16.23■□□□□ 0.19
DDX56-210ENST00000479440 C16orf72Q14CZ0 275 aa16.23■□□□□ 0.19
DDX56-210ENST00000479440 CLPPQ16740 277 aaPredicted RBP16.23■□□□□ 0.19
DDX56-210ENST00000479440 RWDD4Q6NW29 188 aaKnown RBP16.23■□□□□ 0.19
DDX56-210ENST00000479440 ERAP2Q6P179 960 aa16.23■□□□□ 0.19
DDX56-210ENST00000479440 OGFOD3Q6PK18 319 aa16.23■□□□□ 0.19
DDX56-210ENST00000479440 CLEC18BQ6UXF7 455 aa16.23■□□□□ 0.19
DDX56-210ENST00000479440 GBP6Q6ZN66 633 aa16.23■□□□□ 0.19
DDX56-210ENST00000479440 PIM3Q86V86 326 aa16.23■□□□□ 0.19
DDX56-210ENST00000479440 CLEC18CQ8NCF0 446 aa16.23■□□□□ 0.19
DDX56-210ENST00000479440 MSANTD4Q8NCY6 345 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms