RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 WDR63Q8IWG1 891 aa4.38□□□□□ -1.71
UBR3-209ENST00000477461 HERPUD2Q9BSE4 406 aa4.38□□□□□ -1.71
UBR3-209ENST00000477461 MYH16Q9H6N6 1097 aa4.38□□□□□ -1.71
UBR3-209ENST00000477461 PTPRHQ9HD43 1115 aa4.38□□□□□ -1.71
UBR3-209ENST00000477461 LRFN1Q9P244 771 aa4.38□□□□□ -1.71
UBR3-209ENST00000477461 DAPP1Q9UN19 280 aa4.38□□□□□ -1.71
UBR3-209ENST00000477461 LAS1LQ9Y4W2 734 aaKnown RBP4.38□□□□□ -1.71
UBR3-209ENST00000477461 PCDHA10Q9Y5I2 948 aa4.38□□□□□ -1.71
UBR3-209ENST00000477461 THSD7AQ9UPZ6 1657 aa4.38□□□□□ -1.71
UBR3-209ENST00000477461 SHANK3Q9BYB0 1731 aa4.38□□□□□ -1.71
UBR3-209ENST00000477461 KRT86O43790 486 aa4.37□□□□□ -1.71
UBR3-209ENST00000477461 GLUD1P00367 558 aa4.37□□□□□ -1.71
UBR3-209ENST00000477461 ITGB8P26012 769 aa4.37□□□□□ -1.71
UBR3-209ENST00000477461 CHKAP35790 457 aa4.37□□□□□ -1.71
UBR3-209ENST00000477461 GLUD2P49448 558 aa4.37□□□□□ -1.71
UBR3-209ENST00000477461 ZP1P60852 638 aa4.37□□□□□ -1.71
UBR3-209ENST00000477461 SF3A3Q12874 501 aaKnown RBP eCLIP4.37□□□□□ -1.71
UBR3-209ENST00000477461 DCTN1Q14203 1278 aa4.37□□□□□ -1.71
UBR3-209ENST00000477461 KRT81Q14533 505 aa4.37□□□□□ -1.71
UBR3-209ENST00000477461 SHBQ15464 509 aa4.37□□□□□ -1.71
UBR3-209ENST00000477461 TAF7Q15545 349 aaPredicted RBP4.37□□□□□ -1.71
UBR3-209ENST00000477461 DUSP6Q16828 381 aa4.37□□□□□ -1.71
UBR3-209ENST00000477461 BTBD16Q32M84 506 aa4.37□□□□□ -1.71
UBR3-209ENST00000477461 TMEM71Q6P5X7 295 aa4.37□□□□□ -1.71
UBR3-209ENST00000477461 FJX1Q86VR8 437 aa4.37□□□□□ -1.71
UBR3-209ENST00000477461 TMPRSS12Q86WS5 348 aa4.37□□□□□ -1.71
UBR3-209ENST00000477461 CCDC117Q8IWD4 279 aaPredicted RBP4.37□□□□□ -1.71
UBR3-209ENST00000477461 GALNT15Q8N3T1 639 aa4.37□□□□□ -1.71
UBR3-209ENST00000477461 DPP10Q8N608 796 aa4.37□□□□□ -1.71
UBR3-209ENST00000477461 HORMAD2Q8N7B1 307 aa4.37□□□□□ -1.71
UBR3-209ENST00000477461 SPATA5Q8NB90 893 aa4.37□□□□□ -1.71
UBR3-209ENST00000477461 SCAMP5Q8TAC9 235 aa4.37□□□□□ -1.71
UBR3-209ENST00000477461 TMED6Q8WW62 240 aa4.37□□□□□ -1.71
UBR3-209ENST00000477461 NR4A3Q92570 626 aa4.37□□□□□ -1.71
UBR3-209ENST00000477461 THUMPD2Q9BTF0 503 aaKnown RBP4.37□□□□□ -1.71
UBR3-209ENST00000477461 ISCA1Q9BUE6 129 aa4.37□□□□□ -1.71
UBR3-209ENST00000477461 SEPSECSQ9HD40 501 aaKnown RBP4.37□□□□□ -1.71
UBR3-209ENST00000477461 LIN7CQ9NUP9 197 aaKnown RBP4.37□□□□□ -1.71
UBR3-209ENST00000477461 TMLHEQ9NVH6 421 aa4.37□□□□□ -1.71
UBR3-209ENST00000477461 GRHPRQ9UBQ7 328 aa4.37□□□□□ -1.71
UBR3-209ENST00000477461 IL16Q14005 1332 aa4.37□□□□□ -1.71
UBR3-209ENST00000477461 BRWD3Q6RI45 1802 aa4.37□□□□□ -1.71
UBR3-209ENST00000477461 DOT1LQ8TEK3 1739 aa4.36□□□□□ -1.71
UBR3-209ENST00000477461 CLEC18AA5D8T8 446 aa4.36□□□□□ -1.71
UBR3-209ENST00000477461 SLC38A8A6NNN8 435 aa4.36□□□□□ -1.71
UBR3-209ENST00000477461 BTBD18B2RXH4 712 aa4.36□□□□□ -1.71
UBR3-209ENST00000477461 ERVV-2B6SEH9 535 aa4.36□□□□□ -1.71
UBR3-209ENST00000477461 MS4A18H0YCH9 400 aa4.36□□□□□ -1.71
UBR3-209ENST00000477461 DDNO94850 711 aaPredicted RBP4.36□□□□□ -1.71
UBR3-209ENST00000477461 PPP1R3DO95685 299 aa4.36□□□□□ -1.71
UBR3-209ENST00000477461 STAT1P42224 750 aa4.36□□□□□ -1.71
UBR3-209ENST00000477461 PPP3CCP48454 512 aa4.36□□□□□ -1.71
UBR3-209ENST00000477461 MCM2P49736 904 aa4.36□□□□□ -1.71
UBR3-209ENST00000477461 ERVFC1-1P60608 527 aa4.36□□□□□ -1.71
UBR3-209ENST00000477461 RHAGQ02094 409 aa4.36□□□□□ -1.71
UBR3-209ENST00000477461 EEF1A2Q05639 463 aaKnown RBP4.36□□□□□ -1.71
UBR3-209ENST00000477461 DSC1Q08554 894 aa4.36□□□□□ -1.71
UBR3-209ENST00000477461 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.36□□□□□ -1.71
UBR3-209ENST00000477461 C16orf82Q7Z2V1 217 aa4.36□□□□□ -1.71
UBR3-209ENST00000477461 FAM185AQ8N0U4 392 aa4.36□□□□□ -1.71
UBR3-209ENST00000477461 TTC5Q8N0Z6 440 aa4.36□□□□□ -1.71
UBR3-209ENST00000477461 CLEC18CQ8NCF0 446 aa4.36□□□□□ -1.71
UBR3-209ENST00000477461 IL17REQ8NFR9 667 aa4.36□□□□□ -1.71
UBR3-209ENST00000477461 SLC2A12Q8TD20 617 aa4.36□□□□□ -1.71
UBR3-209ENST00000477461 HMGB4Q8WW32 186 aa4.36□□□□□ -1.71
UBR3-209ENST00000477461 CPT1BQ92523 772 aa4.36□□□□□ -1.71
UBR3-209ENST00000477461 HDHD5Q9BXW7 423 aa4.36□□□□□ -1.71
UBR3-209ENST00000477461 TWSG1Q9GZX9 223 aa4.36□□□□□ -1.71
UBR3-209ENST00000477461 HIPK3Q9H422 1215 aa4.36□□□□□ -1.71
UBR3-209ENST00000477461 SAYSD1Q9NPB0 183 aa4.36□□□□□ -1.71
UBR3-209ENST00000477461 RNF146Q9NTX7 359 aa4.36□□□□□ -1.71
UBR3-209ENST00000477461 TMOD3Q9NYL9 352 aa4.36□□□□□ -1.71
UBR3-209ENST00000477461 NDUFAF4Q9P032 175 aa4.36□□□□□ -1.71
UBR3-209ENST00000477461 SRP68Q9UHB9 627 aaKnown RBP4.36□□□□□ -1.71
UBR3-209ENST00000477461 TSPYL4Q9UJ04 414 aa4.36□□□□□ -1.71
UBR3-209ENST00000477461 ITGB4P16144 1822 aa4.36□□□□□ -1.71
UBR3-209ENST00000477461 IPO5O00410 1097 aaKnown RBP4.35□□□□□ -1.71
UBR3-209ENST00000477461 AVPR1AP37288 418 aa4.35□□□□□ -1.71
UBR3-209ENST00000477461 CYP2J2P51589 502 aa4.35□□□□□ -1.71
UBR3-209ENST00000477461 COASYQ13057 564 aa4.35□□□□□ -1.71
UBR3-209ENST00000477461 EFR3AQ14156 821 aa4.35□□□□□ -1.71
UBR3-209ENST00000477461 HNF4GQ14541 408 aa4.35□□□□□ -1.71
UBR3-209ENST00000477461 PLCB4Q15147 1175 aa4.35□□□□□ -1.71
UBR3-209ENST00000477461 TDRD12Q587J7 1177 aaKnown RBP4.35□□□□□ -1.71
UBR3-209ENST00000477461 FAM76BQ5HYJ3 339 aa4.35□□□□□ -1.71
UBR3-209ENST00000477461 JMJD6Q6NYC1 403 aaPredicted RBP4.35□□□□□ -1.71
UBR3-209ENST00000477461 SPSB3Q6PJ21 355 aa4.35□□□□□ -1.71
UBR3-209ENST00000477461 RNF144BQ7Z419 303 aa4.35□□□□□ -1.71
UBR3-209ENST00000477461 SMC5Q8IY18 1101 aa4.35□□□□□ -1.71
UBR3-209ENST00000477461 VPS52Q8N1B4 723 aa4.35□□□□□ -1.71
UBR3-209ENST00000477461 MYCT1Q8N699 235 aa4.35□□□□□ -1.71
UBR3-209ENST00000477461 OR6Y1Q8NGX8 325 aa4.35□□□□□ -1.71
UBR3-209ENST00000477461 CEP76Q8TAP6 659 aa4.35□□□□□ -1.71
UBR3-209ENST00000477461 SPPL3Q8TCT6 385 aa4.35□□□□□ -1.71
UBR3-209ENST00000477461 PAGR1Q9BTK6 254 aa4.35□□□□□ -1.71
UBR3-209ENST00000477461 ABHD16BQ9H3Z7 469 aa4.35□□□□□ -1.71
UBR3-209ENST00000477461 ACTR5Q9H9F9 607 aaPredicted RBP4.35□□□□□ -1.71
UBR3-209ENST00000477461 BABAM1Q9NWV8 329 aa4.35□□□□□ -1.71
UBR3-209ENST00000477461 OCIAD1Q9NX40 245 aa4.35□□□□□ -1.71
UBR3-209ENST00000477461 CDH22Q9UJ99 828 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms