RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 DNAJC25-GNG10A0A024R161 153 aa11.1□□□□□ -0.63
COL27A1-204ENST00000477421 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.1□□□□□ -0.63
COL27A1-204ENST00000477421 ZNF839A8K0R7 811 aa11.1□□□□□ -0.63
COL27A1-204ENST00000477421 H7C4K7 107 aa11.1□□□□□ -0.63
COL27A1-204ENST00000477421 PIRO00625 290 aa11.1□□□□□ -0.63
COL27A1-204ENST00000477421 HGFP14210 728 aa11.1□□□□□ -0.63
COL27A1-204ENST00000477421 SLC2A4P14672 509 aa11.1□□□□□ -0.63
COL27A1-204ENST00000477421 ETS2P15036 469 aa11.1□□□□□ -0.63
COL27A1-204ENST00000477421 PSMA4P25789 261 aaKnown RBP11.1□□□□□ -0.63
COL27A1-204ENST00000477421 SLC10A7Q0GE19 358 aa11.1□□□□□ -0.63
COL27A1-204ENST00000477421 GRB14Q14449 540 aa11.1□□□□□ -0.63
COL27A1-204ENST00000477421 LSM12Q3MHD2 195 aaKnown RBP11.1□□□□□ -0.63
COL27A1-204ENST00000477421 ATP6AP1LQ52LC2 224 aa11.1□□□□□ -0.63
COL27A1-204ENST00000477421 TTC33Q6PID6 262 aaPredicted RBP11.1□□□□□ -0.63
COL27A1-204ENST00000477421 MARK2Q7KZI7 788 aaKnown RBP11.1□□□□□ -0.63
COL27A1-204ENST00000477421 NET1Q7Z628 596 aaPredicted RBP11.1□□□□□ -0.63
COL27A1-204ENST00000477421 TREML1Q86YW5 311 aa11.1□□□□□ -0.63
COL27A1-204ENST00000477421 RELL1Q8IUW5 271 aa11.1□□□□□ -0.63
COL27A1-204ENST00000477421 OR4K2Q8NGD2 314 aa11.1□□□□□ -0.63
COL27A1-204ENST00000477421 MTFMTQ96DP5 389 aaKnown RBP11.1□□□□□ -0.63
COL27A1-204ENST00000477421 OR52B2Q96RD2 323 aa11.1□□□□□ -0.63
COL27A1-204ENST00000477421 MRPL57Q9BQC6 102 aaKnown RBP11.1□□□□□ -0.63
COL27A1-204ENST00000477421 HGH1Q9BTY7 390 aa11.1□□□□□ -0.63
COL27A1-204ENST00000477421 CIPCQ9C0C6 399 aa11.1□□□□□ -0.63
COL27A1-204ENST00000477421 HMX1Q9NP08 348 aaPredicted RBP11.1□□□□□ -0.63
COL27A1-204ENST00000477421 PAPOLBQ9NRJ5 636 aaKnown RBP11.1□□□□□ -0.63
COL27A1-204ENST00000477421 PDP2Q9P2J9 529 aa11.1□□□□□ -0.63
COL27A1-204ENST00000477421 SOCS7O14512 581 aa11.1□□□□□ -0.63
COL27A1-204ENST00000477421 DLDP09622 509 aaKnown RBP11.1□□□□□ -0.63
COL27A1-204ENST00000477421 PIK3CGP48736 1102 aa11.1□□□□□ -0.63
COL27A1-204ENST00000477421 SATB1Q01826 763 aa11.1□□□□□ -0.63
COL27A1-204ENST00000477421 SEMG2Q02383 582 aa11.1□□□□□ -0.63
COL27A1-204ENST00000477421 SP3Q02447 781 aa11.1□□□□□ -0.63
COL27A1-204ENST00000477421 GTF2H3Q13889 308 aa11.1□□□□□ -0.63
COL27A1-204ENST00000477421 BOP1Q14137 746 aaKnown RBP11.1□□□□□ -0.63
COL27A1-204ENST00000477421 PPP1R10Q96QC0 940 aaKnown RBP11.1□□□□□ -0.63
COL27A1-204ENST00000477421 TMEM79Q9BSE2 394 aa11.1□□□□□ -0.63
COL27A1-204ENST00000477421 MMADHCQ9H3L0 296 aaPredicted RBP11.1□□□□□ -0.63
COL27A1-204ENST00000477421 ACTR8Q9H981 624 aa11.1□□□□□ -0.63
COL27A1-204ENST00000477421 DDX18Q9NVP1 670 aaKnown RBP11.1□□□□□ -0.63
COL27A1-204ENST00000477421 MIOSQ9NXC5 875 aa11.1□□□□□ -0.63
COL27A1-204ENST00000477421 STX18Q9P2W9 335 aaKnown RBP11.1□□□□□ -0.63
COL27A1-204ENST00000477421 ARHGAP10A1A4S6 786 aa11.1□□□□□ -0.63
COL27A1-204ENST00000477421 KIF1CO43896 1103 aaKnown RBP11.1□□□□□ -0.63
COL27A1-204ENST00000477421 ALDOAP04075 364 aaKnown RBP11.1□□□□□ -0.63
COL27A1-204ENST00000477421 URODP06132 367 aa11.1□□□□□ -0.63
COL27A1-204ENST00000477421 PSME3P61289 254 aa11.1□□□□□ -0.63
COL27A1-204ENST00000477421 PTPRCAPQ14761 206 aa11.1□□□□□ -0.63
COL27A1-204ENST00000477421 PITRM1Q5JRX3 1037 aa11.1□□□□□ -0.63
COL27A1-204ENST00000477421 BRMS1LQ5PSV4 323 aa11.1□□□□□ -0.63
COL27A1-204ENST00000477421 RNF220Q5VTB9 566 aa11.1□□□□□ -0.63
COL27A1-204ENST00000477421 DBF4BQ8NFT6 615 aa11.1□□□□□ -0.63
COL27A1-204ENST00000477421 HEXDCQ8WVB3 486 aa11.1□□□□□ -0.63
COL27A1-204ENST00000477421 KBTBD7Q8WVZ9 684 aa11.1□□□□□ -0.63
COL27A1-204ENST00000477421 DNAJC1Q96KC8 554 aaKnown RBP11.1□□□□□ -0.63
COL27A1-204ENST00000477421 TBCDQ9BTW9 1192 aa11.1□□□□□ -0.63
COL27A1-204ENST00000477421 MAF1Q9H063 256 aa11.1□□□□□ -0.63
COL27A1-204ENST00000477421 LMCD1Q9NZU5 365 aa11.1□□□□□ -0.63
COL27A1-204ENST00000477421 IGSF9Q9P2J2 1179 aa11.1□□□□□ -0.63
COL27A1-204ENST00000477421 ARIH1Q9Y4X5 557 aaPredicted RBP11.1□□□□□ -0.63
COL27A1-204ENST00000477421 KCNU1A8MYU2 1149 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 J3KR12 359 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 LRG1P02750 347 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 ZBTB48P10074 688 aaPredicted RBP11.09□□□□□ -0.63
COL27A1-204ENST00000477421 PBLDP30039 288 aaPredicted RBP11.09□□□□□ -0.63
COL27A1-204ENST00000477421 SMAD3P84022 425 aaKnown RBP11.09□□□□□ -0.63
COL27A1-204ENST00000477421 SLC18A2Q05940 514 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 MOGSQ13724 837 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 PPM1LQ5SGD2 360 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 IRGCQ6NXR0 463 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 SLC24A5Q71RS6 500 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 DHFR2Q86XF0 187 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 RNF217Q8TC41 542 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 UCMAQ8WVF2 138 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 FAXDC2Q96IV6 333 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 YME1L1Q96TA2 773 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 HAUS8Q9BT25 410 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 ADAMTS10Q9H324 1103 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 CLIC5Q9NZA1 410 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 FETUBQ9UGM5 382 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 ZNHIT2Q9UHR6 403 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 CDH22Q9UJ99 828 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 SORCS3Q9UPU3 1222 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 TRIM17Q9Y577 477 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 SYNDIG1LA6NDD5 238 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 PRR23AA6NEV1 266 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 RTN3O95197 1032 aaPredicted RBP11.09□□□□□ -0.63
COL27A1-204ENST00000477421 AHSGP02765 367 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 MT-ND1P03886 318 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 PRKCHP24723 683 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 MAP4P27816 1152 aaKnown RBP11.09□□□□□ -0.63
COL27A1-204ENST00000477421 SLC1A2P43004 574 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 PPP3CCP48454 512 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 ZNF135P52742 658 aaPredicted RBP11.09□□□□□ -0.63
COL27A1-204ENST00000477421 MAPK10P53779 464 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 PURAQ00577 322 aaKnown RBP11.09□□□□□ -0.63
COL27A1-204ENST00000477421 BTG3Q14201 252 aaPredicted RBP11.09□□□□□ -0.63
COL27A1-204ENST00000477421 CYP51A1Q16850 503 aa11.09□□□□□ -0.63
COL27A1-204ENST00000477421 VARS2Q5ST30 1063 aaKnown RBP11.09□□□□□ -0.63
COL27A1-204ENST00000477421 CUZD1Q86UP6 607 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms