RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 GSCP56915 257 aaPredicted RBP11.78□□□□□ -0.52
VARS2-208ENST00000477052 TPI1P60174 286 aa11.78□□□□□ -0.52
VARS2-208ENST00000477052 MYL5Q02045 173 aa11.78□□□□□ -0.52
VARS2-208ENST00000477052 NCAPHQ15003 741 aa11.78□□□□□ -0.52
VARS2-208ENST00000477052 ARHGAP40Q5TG30 622 aa11.78□□□□□ -0.52
VARS2-208ENST00000477052 ACAD10Q6JQN1 1059 aa11.78□□□□□ -0.52
VARS2-208ENST00000477052 DCUN1D2Q6PH85 259 aa11.78□□□□□ -0.52
VARS2-208ENST00000477052 SASS6Q6UVJ0 657 aa11.78□□□□□ -0.52
VARS2-208ENST00000477052 PCSK4Q6UW60 755 aa11.78□□□□□ -0.52
VARS2-208ENST00000477052 ARHGAP36Q6ZRI8 547 aa11.78□□□□□ -0.52
VARS2-208ENST00000477052 RBM43Q6ZSC3 357 aaKnown RBP11.78□□□□□ -0.52
VARS2-208ENST00000477052 SFTPA2Q8IWL1 248 aa11.78□□□□□ -0.52
VARS2-208ENST00000477052 TP53INP2Q8IXH6 220 aa11.78□□□□□ -0.52
VARS2-208ENST00000477052 MCOLN2Q8IZK6 566 aa11.78□□□□□ -0.52
VARS2-208ENST00000477052 AOPEPQ8N6M6 819 aa11.78□□□□□ -0.52
VARS2-208ENST00000477052 ARFGAP1Q8N6T3 406 aa11.78□□□□□ -0.52
VARS2-208ENST00000477052 DENND6BQ8NEG7 585 aa11.78□□□□□ -0.52
VARS2-208ENST00000477052 FAM174AQ8TBP5 190 aa11.78□□□□□ -0.52
VARS2-208ENST00000477052 ASB12Q8WXK4 309 aa11.78□□□□□ -0.52
VARS2-208ENST00000477052 FUBP1Q96AE4 644 aaKnown RBP11.78□□□□□ -0.52
VARS2-208ENST00000477052 HIC2Q96JB3 615 aa11.78□□□□□ -0.52
VARS2-208ENST00000477052 VCPIP1Q96JH7 1222 aa11.78□□□□□ -0.52
VARS2-208ENST00000477052 NSMCE3Q96MG7 304 aa11.78□□□□□ -0.52
VARS2-208ENST00000477052 PEBP4Q96S96 227 aa11.78□□□□□ -0.52
VARS2-208ENST00000477052 CNPY3Q9BT09 278 aa11.78□□□□□ -0.52
VARS2-208ENST00000477052 SLC13A1Q9BZW2 595 aa11.78□□□□□ -0.52
VARS2-208ENST00000477052 SLC39A8Q9C0K1 460 aa11.78□□□□□ -0.52
VARS2-208ENST00000477052 DHX35Q9H5Z1 703 aaKnown RBP11.78□□□□□ -0.52
VARS2-208ENST00000477052 POLR1BQ9H9Y6 1135 aa11.78□□□□□ -0.52
VARS2-208ENST00000477052 PDFQ9HBH1 243 aa11.78□□□□□ -0.52
VARS2-208ENST00000477052 ASCL3Q9NQ33 180 aa11.78□□□□□ -0.52
VARS2-208ENST00000477052 WDR70Q9NW82 654 aa11.78□□□□□ -0.52
VARS2-208ENST00000477052 SPASTQ9UBP0 616 aa11.78□□□□□ -0.52
VARS2-208ENST00000477052 UBA2Q9UBT2 640 aaPredicted RBP11.78□□□□□ -0.52
VARS2-208ENST00000477052 RABGEF1Q9UJ41 708 aa11.78□□□□□ -0.52
VARS2-208ENST00000477052 DAAM1Q9Y4D1 1078 aa11.78□□□□□ -0.52
VARS2-208ENST00000477052 ENTPD2Q9Y5L3 495 aa11.78□□□□□ -0.52
VARS2-208ENST00000477052 CSNK1G3Q9Y6M4 447 aa11.78□□□□□ -0.52
VARS2-208ENST00000477052 EME2A4GXA9 379 aaPredicted RBP11.77□□□□□ -0.53
VARS2-208ENST00000477052 ANKRD62A6NC57 917 aa11.77□□□□□ -0.53
VARS2-208ENST00000477052 ZSCAN5CA6NGD5 496 aaPredicted RBP11.77□□□□□ -0.53
VARS2-208ENST00000477052 KLK10O43240 276 aa11.77□□□□□ -0.53
VARS2-208ENST00000477052 ANXA6P08133 673 aa11.77□□□□□ -0.53
VARS2-208ENST00000477052 C6P13671 934 aa11.77□□□□□ -0.53
VARS2-208ENST00000477052 LSSP48449 732 aa11.77□□□□□ -0.53
VARS2-208ENST00000477052 LIG3P49916 1009 aa11.77□□□□□ -0.53
VARS2-208ENST00000477052 PCBP4P57723 403 aaKnown RBP11.77□□□□□ -0.53
VARS2-208ENST00000477052 YBEYP58557 167 aaPredicted RBP11.77□□□□□ -0.53
VARS2-208ENST00000477052 PPARDQ03181 441 aa11.77□□□□□ -0.53
VARS2-208ENST00000477052 RAD51Q06609 339 aa11.77□□□□□ -0.53
VARS2-208ENST00000477052 INPP5AQ14642 412 aa11.77□□□□□ -0.53
VARS2-208ENST00000477052 LRRC14Q15048 493 aa11.77□□□□□ -0.53
VARS2-208ENST00000477052 ALG11Q2TAA5 492 aa11.77□□□□□ -0.53
VARS2-208ENST00000477052 PARP15Q460N3 678 aa11.77□□□□□ -0.53
VARS2-208ENST00000477052 TMEM52BQ4KMG9 183 aa11.77□□□□□ -0.53
VARS2-208ENST00000477052 INO80DQ53TQ3 878 aaPredicted RBP11.77□□□□□ -0.53
VARS2-208ENST00000477052 ENPP7Q6UWV6 458 aa11.77□□□□□ -0.53
VARS2-208ENST00000477052 MACC1Q6ZN28 852 aa11.77□□□□□ -0.53
VARS2-208ENST00000477052 GPR155Q7Z3F1 870 aa11.77□□□□□ -0.53
VARS2-208ENST00000477052 IRF2BP2Q7Z5L9 587 aa11.77□□□□□ -0.53
VARS2-208ENST00000477052 UMODL1-AS1Q8N2C9 162 aa11.77□□□□□ -0.53
VARS2-208ENST00000477052 KYQ8NBH2 561 aa11.77□□□□□ -0.53
VARS2-208ENST00000477052 PLA2G15Q8NCC3 412 aa11.77□□□□□ -0.53
VARS2-208ENST00000477052 TSEN2Q8NCE0 465 aaKnown RBP11.77□□□□□ -0.53
VARS2-208ENST00000477052 ZNF248Q8NDW4 579 aa11.77□□□□□ -0.53
VARS2-208ENST00000477052 PCDH19Q8TAB3 1148 aa11.77□□□□□ -0.53
VARS2-208ENST00000477052 ARHGEF26Q96DR7 871 aa11.77□□□□□ -0.53
VARS2-208ENST00000477052 ERGIC2Q96RQ1 377 aa11.77□□□□□ -0.53
VARS2-208ENST00000477052 KCTD15Q96SI1 283 aaPredicted RBP11.77□□□□□ -0.53
VARS2-208ENST00000477052 CCDC3Q9BQI4 270 aa11.77□□□□□ -0.53
VARS2-208ENST00000477052 BOCQ9BWV1 1114 aa11.77□□□□□ -0.53
VARS2-208ENST00000477052 SUV39H2Q9H5I1 410 aa11.77□□□□□ -0.53
VARS2-208ENST00000477052 LRRC19Q9H756 370 aa11.77□□□□□ -0.53
VARS2-208ENST00000477052 CATSPERBQ9H7T0 1116 aa11.77□□□□□ -0.53
VARS2-208ENST00000477052 DKK3Q9UBP4 350 aa11.77□□□□□ -0.53
VARS2-208ENST00000477052 SALL4Q9UJQ4 1053 aa11.77□□□□□ -0.53
VARS2-208ENST00000477052 AP4E1Q9UPM8 1137 aa11.77□□□□□ -0.53
VARS2-208ENST00000477052 MFHAS1Q9Y4C4 1052 aa11.77□□□□□ -0.53
VARS2-208ENST00000477052 CXorf51AA0A1B0GTR3 108 aa11.76□□□□□ -0.53
VARS2-208ENST00000477052 WASH4PA8MWX3 477 aa11.76□□□□□ -0.53
VARS2-208ENST00000477052 LMO7DNF2Z398 122 aa11.76□□□□□ -0.53
VARS2-208ENST00000477052 GOLGA6L22H0YM25 854 aa11.76□□□□□ -0.53
VARS2-208ENST00000477052 DFFAO00273 331 aa11.76□□□□□ -0.53
VARS2-208ENST00000477052 EEF2KO00418 725 aaKnown RBP11.76□□□□□ -0.53
VARS2-208ENST00000477052 ATXN7O15265 892 aaPredicted RBP11.76□□□□□ -0.53
VARS2-208ENST00000477052 KALRNO60229 2985 aa11.76□□□□□ -0.53
VARS2-208ENST00000477052 PRAMEF11O60813 436 aa11.76□□□□□ -0.53
VARS2-208ENST00000477052 TNFAIP3P21580 790 aa11.76□□□□□ -0.53
VARS2-208ENST00000477052 PSMA2P25787 234 aa11.76□□□□□ -0.53
VARS2-208ENST00000477052 PDX1P52945 283 aa11.76□□□□□ -0.53
VARS2-208ENST00000477052 MAMLD1Q13495 774 aa11.76□□□□□ -0.53
VARS2-208ENST00000477052 PTK2BQ14289 1009 aa11.76□□□□□ -0.53
VARS2-208ENST00000477052 STX1AQ16623 288 aa11.76□□□□□ -0.53
VARS2-208ENST00000477052 UGP2Q16851 508 aa11.76□□□□□ -0.53
VARS2-208ENST00000477052 C6orf132Q5T0Z8 1188 aa11.76□□□□□ -0.53
VARS2-208ENST00000477052 E4F1Q66K89 784 aaPredicted RBP11.76□□□□□ -0.53
VARS2-208ENST00000477052 RBM44Q6ZP01 1051 aaKnown RBP11.76□□□□□ -0.53
VARS2-208ENST00000477052 B3GNT8Q7Z7M8 397 aa11.76□□□□□ -0.53
VARS2-208ENST00000477052 ARHGAP12Q8IWW6 846 aa11.76□□□□□ -0.53
VARS2-208ENST00000477052 PELI3Q8N2H9 469 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms