RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 CTAGE3PQ8IX95 158 aa29.09■■■□□ 2.25
VEGFA-211ENST00000476772 CYP4X1Q8N118 509 aa29.09■■■□□ 2.25
VEGFA-211ENST00000476772 PPM1NQ8N819 430 aa29.09■■■□□ 2.25
VEGFA-211ENST00000476772 MRGPRX3Q96LB0 322 aa29.09■■■□□ 2.25
VEGFA-211ENST00000476772 CEP44Q9C0F1 390 aa29.09■■■□□ 2.25
VEGFA-211ENST00000476772 MRM3Q9HC36 420 aaKnown RBP29.09■■■□□ 2.25
VEGFA-211ENST00000476772 PSMC3IPQ9P2W1 217 aaPredicted RBP29.09■■■□□ 2.25
VEGFA-211ENST00000476772 DEC1Q9P2X7 70 aa29.09■■■□□ 2.25
VEGFA-211ENST00000476772 SPTBN5Q9NRC6 3674 aaKnown RBP29.08■■■□□ 2.25
VEGFA-211ENST00000476772 POLR3GO15318 223 aaPredicted RBP29.08■■■□□ 2.25
VEGFA-211ENST00000476772 MSH2P43246 934 aa29.08■■■□□ 2.25
VEGFA-211ENST00000476772 SNRPD1P62314 119 aaKnown RBP29.08■■■□□ 2.25
VEGFA-211ENST00000476772 KDSRQ06136 332 aa29.08■■■□□ 2.25
VEGFA-211ENST00000476772 DLG2Q15700 870 aa29.08■■■□□ 2.25
VEGFA-211ENST00000476772 SMAD1Q15797 465 aaKnown RBP29.08■■■□□ 2.25
VEGFA-211ENST00000476772 TNFAIP8L3Q5GJ75 292 aa29.08■■■□□ 2.25
VEGFA-211ENST00000476772 PDCD6IPQ8WUM4 868 aaKnown RBP29.08■■■□□ 2.25
VEGFA-211ENST00000476772 CERS2Q96G23 380 aa29.08■■■□□ 2.25
VEGFA-211ENST00000476772 RANBP9Q96S59 729 aa29.08■■■□□ 2.25
VEGFA-211ENST00000476772 TRMT61BQ9BVS5 477 aaKnown RBP29.08■■■□□ 2.25
VEGFA-211ENST00000476772 PPANQ9NQ55 473 aaKnown RBP29.08■■■□□ 2.25
VEGFA-211ENST00000476772 PRKAG3Q9UGI9 489 aa29.08■■■□□ 2.25
VEGFA-211ENST00000476772 NUMBLQ9Y6R0 609 aa29.08■■■□□ 2.25
VEGFA-211ENST00000476772 GRXCR2A6NFK2 248 aa29.07■■■□□ 2.24
VEGFA-211ENST00000476772 PRKCGP05129 697 aa29.07■■■□□ 2.24
VEGFA-211ENST00000476772 GKP32189 559 aa29.07■■■□□ 2.24
VEGFA-211ENST00000476772 NAIF1Q69YI7 327 aaPredicted RBP29.07■■■□□ 2.24
VEGFA-211ENST00000476772 RYBPQ8N488 228 aaPredicted RBP29.07■■■□□ 2.24
VEGFA-211ENST00000476772 PCDH20Q8N6Y1 951 aaKnown RBP29.07■■■□□ 2.24
VEGFA-211ENST00000476772 LPCAT1Q8NF37 534 aa29.07■■■□□ 2.24
VEGFA-211ENST00000476772 DCAKDQ8WVC6 231 aa29.07■■■□□ 2.24
VEGFA-211ENST00000476772 SLC44A1Q8WWI5 657 aa29.07■■■□□ 2.24
VEGFA-211ENST00000476772 RMDN1Q96DB5 314 aa29.07■■■□□ 2.24
VEGFA-211ENST00000476772 HEATR9A2RTY3 570 aa29.06■■■□□ 2.24
VEGFA-211ENST00000476772 GSRP00390 522 aa29.06■■■□□ 2.24
VEGFA-211ENST00000476772 ALADP13716 330 aa29.06■■■□□ 2.24
VEGFA-211ENST00000476772 GJA4P35212 333 aa29.06■■■□□ 2.24
VEGFA-211ENST00000476772 MAPK8P45983 427 aa29.06■■■□□ 2.24
VEGFA-211ENST00000476772 MAGOHP61326 146 aaKnown RBP29.06■■■□□ 2.24
VEGFA-211ENST00000476772 RASA2Q15283 850 aa29.06■■■□□ 2.24
VEGFA-211ENST00000476772 ADGRD1Q6QNK2 874 aa29.06■■■□□ 2.24
VEGFA-211ENST00000476772 LRRC6Q86X45 466 aa29.06■■■□□ 2.24
VEGFA-211ENST00000476772 CAMK1DQ8IU85 385 aa29.06■■■□□ 2.24
VEGFA-211ENST00000476772 NXPE3Q969Y0 559 aa29.06■■■□□ 2.24
VEGFA-211ENST00000476772 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP29.05■■■□□ 2.24
VEGFA-211ENST00000476772 BNIP3LO60238 219 aa29.05■■■□□ 2.24
VEGFA-211ENST00000476772 PIGNO95427 931 aa29.05■■■□□ 2.24
VEGFA-211ENST00000476772 PIRTP0C851 137 aa29.05■■■□□ 2.24
VEGFA-211ENST00000476772 ERVK-10P10266 1014 aa29.05■■■□□ 2.24
VEGFA-211ENST00000476772 CA4P22748 312 aa29.05■■■□□ 2.24
VEGFA-211ENST00000476772 HTR4Q13639 388 aa29.05■■■□□ 2.24
VEGFA-211ENST00000476772 FRG1Q14331 258 aaKnown RBP29.05■■■□□ 2.24
VEGFA-211ENST00000476772 CCDC85BQ15834 202 aaPredicted RBP29.05■■■□□ 2.24
VEGFA-211ENST00000476772 BLOC1S5Q8TDH9 187 aa29.05■■■□□ 2.24
VEGFA-211ENST00000476772 STMN4Q9H169 189 aaPredicted RBP29.05■■■□□ 2.24
VEGFA-211ENST00000476772 HECAQ9UBI9 543 aaPredicted RBP29.05■■■□□ 2.24
VEGFA-211ENST00000476772 SLC2A6Q9UGQ3 507 aa29.05■■■□□ 2.24
VEGFA-211ENST00000476772 FOXO6A8MYZ6 492 aa29.05■■■□□ 2.24
VEGFA-211ENST00000476772 PRRT4C9JH25 899 aa29.05■■■□□ 2.24
VEGFA-211ENST00000476772 FZD6O60353 706 aa29.05■■■□□ 2.24
VEGFA-211ENST00000476772 UGT1A9O60656 530 aa29.05■■■□□ 2.24
VEGFA-211ENST00000476772 ASLP04424 464 aa29.05■■■□□ 2.24
VEGFA-211ENST00000476772 ATP5BP06576 529 aaKnown RBP29.05■■■□□ 2.24
VEGFA-211ENST00000476772 KCNA5P22460 613 aa29.05■■■□□ 2.24
VEGFA-211ENST00000476772 OPRD1P41143 372 aa29.05■■■□□ 2.24
VEGFA-211ENST00000476772 BCL2L1Q07817 233 aa29.05■■■□□ 2.24
VEGFA-211ENST00000476772 MGAT5Q09328 741 aa29.05■■■□□ 2.24
VEGFA-211ENST00000476772 PTPRNQ16849 979 aa29.05■■■□□ 2.24
VEGFA-211ENST00000476772 ARMC3Q5W041 872 aa29.05■■■□□ 2.24
VEGFA-211ENST00000476772 ESRP1Q6NXG1 681 aaKnown RBP29.05■■■□□ 2.24
VEGFA-211ENST00000476772 Q6ZVU0 165 aa29.05■■■□□ 2.24
VEGFA-211ENST00000476772 MYO19Q96H55 970 aa29.05■■■□□ 2.24
VEGFA-211ENST00000476772 ADGRE3Q9BY15 652 aa29.05■■■□□ 2.24
VEGFA-211ENST00000476772 UGT1A7Q9HAW7 530 aa29.05■■■□□ 2.24
VEGFA-211ENST00000476772 UGT1A10Q9HAW8 530 aa29.05■■■□□ 2.24
VEGFA-211ENST00000476772 UGT1A8Q9HAW9 530 aa29.05■■■□□ 2.24
VEGFA-211ENST00000476772 ELOVL2Q9NXB9 296 aa29.05■■■□□ 2.24
VEGFA-211ENST00000476772 SLC17A6Q9P2U8 582 aa29.05■■■□□ 2.24
VEGFA-211ENST00000476772 ARNTLO00327 626 aa29.04■■■□□ 2.24
VEGFA-211ENST00000476772 INHBAP08476 426 aa29.04■■■□□ 2.24
VEGFA-211ENST00000476772 DLDP09622 509 aaKnown RBP29.04■■■□□ 2.24
VEGFA-211ENST00000476772 CARD16Q5EG05 197 aa29.04■■■□□ 2.24
VEGFA-211ENST00000476772 RASSF3Q86WH2 238 aa29.04■■■□□ 2.24
VEGFA-211ENST00000476772 PHTF2Q8N3S3 785 aa29.04■■■□□ 2.24
VEGFA-211ENST00000476772 CDKL2Q92772 493 aa29.04■■■□□ 2.24
VEGFA-211ENST00000476772 TREX1Q9NSU2 369 aa29.04■■■□□ 2.24
VEGFA-211ENST00000476772 PCDHB9Q9Y5E1 797 aa29.04■■■□□ 2.24
VEGFA-211ENST00000476772 IKBKGQ9Y6K9 419 aa29.04■■■□□ 2.24
VEGFA-211ENST00000476772 ANHXE9PGG2 379 aa29.03■■■□□ 2.24
VEGFA-211ENST00000476772 FAM155BO75949 473 aa29.03■■■□□ 2.24
VEGFA-211ENST00000476772 SRPRAP08240 638 aaKnown RBP29.03■■■□□ 2.24
VEGFA-211ENST00000476772 CCNHP51946 323 aaPredicted RBP29.03■■■□□ 2.24
VEGFA-211ENST00000476772 MYLK3Q32MK0 819 aa29.03■■■□□ 2.24
VEGFA-211ENST00000476772 TSTD2Q5T7W7 516 aa29.03■■■□□ 2.24
VEGFA-211ENST00000476772 ZNF449Q6P9G9 518 aa29.03■■■□□ 2.24
VEGFA-211ENST00000476772 DPY19L3Q6ZPD9 716 aa29.03■■■□□ 2.24
VEGFA-211ENST00000476772 MARK2Q7KZI7 788 aaKnown RBP29.03■■■□□ 2.24
VEGFA-211ENST00000476772 SLC26A11Q86WA9 606 aa29.03■■■□□ 2.24
VEGFA-211ENST00000476772 FRS2Q8WU20 508 aa29.03■■■□□ 2.24
VEGFA-211ENST00000476772 VOPP1Q96AW1 172 aa29.03■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms