RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 GLB1P16278 677 aa16.63■□□□□ 0.25
APOBEC3F-203ENST00000476513 SRP54P61011 504 aaKnown RBP16.63■□□□□ 0.25
APOBEC3F-203ENST00000476513 SNRPD1P62314 119 aaKnown RBP16.63■□□□□ 0.25
APOBEC3F-203ENST00000476513 NFATC4Q14934 902 aa16.63■□□□□ 0.25
APOBEC3F-203ENST00000476513 LRRC14Q15048 493 aa16.63■□□□□ 0.25
APOBEC3F-203ENST00000476513 WSCD2Q2TBF2 565 aa16.63■□□□□ 0.25
APOBEC3F-203ENST00000476513 SLC25A52Q3SY17 297 aa16.63■□□□□ 0.25
APOBEC3F-203ENST00000476513 CERCAMQ5T4B2 595 aa16.63■□□□□ 0.25
APOBEC3F-203ENST00000476513 ATXN7L2Q5T6C5 722 aaPredicted RBP16.63■□□□□ 0.25
APOBEC3F-203ENST00000476513 KCTD16Q68DU8 428 aa16.63■□□□□ 0.25
APOBEC3F-203ENST00000476513 KLHL10Q6JEL2 608 aa16.63■□□□□ 0.25
APOBEC3F-203ENST00000476513 GDPD4Q6W3E5 623 aa16.63■□□□□ 0.25
APOBEC3F-203ENST00000476513 SPRED1Q7Z699 444 aa16.63■□□□□ 0.25
APOBEC3F-203ENST00000476513 ZDHHC17Q8IUH5 632 aa16.63■□□□□ 0.25
APOBEC3F-203ENST00000476513 HAPLN3Q96S86 360 aa16.63■□□□□ 0.25
APOBEC3F-203ENST00000476513 CRACR2AQ9BSW2 395 aa16.63■□□□□ 0.25
APOBEC3F-203ENST00000476513 B3GNT4Q9C0J1 378 aa16.63■□□□□ 0.25
APOBEC3F-203ENST00000476513 PPARGC1AQ9UBK2 798 aaKnown RBP16.63■□□□□ 0.25
APOBEC3F-203ENST00000476513 MAN2B2Q9Y2E5 1009 aa16.63■□□□□ 0.25
APOBEC3F-203ENST00000476513 COQ6Q9Y2Z9 468 aa16.63■□□□□ 0.25
APOBEC3F-203ENST00000476513 SPTAN1Q13813 2472 aaKnown RBP16.63■□□□□ 0.25
APOBEC3F-203ENST00000476513 TEX15Q9BXT5 2789 aa16.63■□□□□ 0.25
APOBEC3F-203ENST00000476513 UNC13CQ8NB66 2214 aa16.62■□□□□ 0.25
APOBEC3F-203ENST00000476513 TIMP2P16035 220 aa16.62■□□□□ 0.25
APOBEC3F-203ENST00000476513 PNLIPP16233 465 aa16.62■□□□□ 0.25
APOBEC3F-203ENST00000476513 HTR1BP28222 390 aa16.62■□□□□ 0.25
APOBEC3F-203ENST00000476513 MARSP56192 900 aaKnown RBP16.62■□□□□ 0.25
APOBEC3F-203ENST00000476513 POLE2P56282 527 aa16.62■□□□□ 0.25
APOBEC3F-203ENST00000476513 APBA1Q02410 837 aa16.62■□□□□ 0.25
APOBEC3F-203ENST00000476513 KCNAB2Q13303 367 aa16.62■□□□□ 0.25
APOBEC3F-203ENST00000476513 C16orf72Q14CZ0 275 aa16.62■□□□□ 0.25
APOBEC3F-203ENST00000476513 PHF19Q5T6S3 580 aa16.62■□□□□ 0.25
APOBEC3F-203ENST00000476513 TRIM65Q6PJ69 517 aa16.62■□□□□ 0.25
APOBEC3F-203ENST00000476513 OGFOD3Q6PK18 319 aa16.62■□□□□ 0.25
APOBEC3F-203ENST00000476513 LEKR1Q6ZMV7 388 aa16.62■□□□□ 0.25
APOBEC3F-203ENST00000476513 SFTPA2Q8IWL1 248 aa16.62■□□□□ 0.25
APOBEC3F-203ENST00000476513 NELFBQ8WX92 580 aa16.62■□□□□ 0.25
APOBEC3F-203ENST00000476513 SHC3Q92529 594 aa16.62■□□□□ 0.25
APOBEC3F-203ENST00000476513 PDXPQ96GD0 296 aa16.62■□□□□ 0.25
APOBEC3F-203ENST00000476513 RBM15Q96T37 977 aaKnown RBP eCLIP16.62■□□□□ 0.25
APOBEC3F-203ENST00000476513 APOOQ9BUR5 198 aa16.62■□□□□ 0.25
APOBEC3F-203ENST00000476513 SEMA6CQ9H3T2 930 aa16.62■□□□□ 0.25
APOBEC3F-203ENST00000476513 PLCB1Q9NQ66 1216 aa16.62■□□□□ 0.25
APOBEC3F-203ENST00000476513 NDFIP2Q9NV92 336 aa16.62■□□□□ 0.25
APOBEC3F-203ENST00000476513 KLQ9UEF7 1012 aa16.62■□□□□ 0.25
APOBEC3F-203ENST00000476513 OR1A2Q9Y585 309 aa16.62■□□□□ 0.25
APOBEC3F-203ENST00000476513 GNA14O95837 355 aa16.61■□□□□ 0.25
APOBEC3F-203ENST00000476513 CCL4P13236 92 aa16.61■□□□□ 0.25
APOBEC3F-203ENST00000476513 KRT9P35527 623 aa16.61■□□□□ 0.25
APOBEC3F-203ENST00000476513 ETFBP38117 255 aa16.61■□□□□ 0.25
APOBEC3F-203ENST00000476513 CASRP41180 1078 aa16.61■□□□□ 0.25
APOBEC3F-203ENST00000476513 PPP1R2P41236 205 aa16.61■□□□□ 0.25
APOBEC3F-203ENST00000476513 GEMIN4P57678 1058 aaKnown RBP16.61■□□□□ 0.25
APOBEC3F-203ENST00000476513 PTK2Q05397 1052 aa16.61■□□□□ 0.25
APOBEC3F-203ENST00000476513 INPP5AQ14642 412 aa16.61■□□□□ 0.25
APOBEC3F-203ENST00000476513 TMEM164Q5U3C3 297 aa16.61■□□□□ 0.25
APOBEC3F-203ENST00000476513 FOXR2Q6PJQ5 311 aa16.61■□□□□ 0.25
APOBEC3F-203ENST00000476513 NKD1Q969G9 470 aa16.61■□□□□ 0.25
APOBEC3F-203ENST00000476513 FAM81BQ96LP2 452 aa16.61■□□□□ 0.25
APOBEC3F-203ENST00000476513 TMEM51Q9NW97 253 aa16.61■□□□□ 0.25
APOBEC3F-203ENST00000476513 LRIT1Q9P2V4 623 aa16.61■□□□□ 0.25
APOBEC3F-203ENST00000476513 RELNP78509 3460 aa16.6■□□□□ 0.25
APOBEC3F-203ENST00000476513 PPP1R3GB7ZBB8 358 aa16.6■□□□□ 0.25
APOBEC3F-203ENST00000476513 STMND1H3BQB6 276 aa16.6■□□□□ 0.25
APOBEC3F-203ENST00000476513 TNFP01375 233 aa16.6■□□□□ 0.25
APOBEC3F-203ENST00000476513 SLC9A1P19634 815 aa16.6■□□□□ 0.25
APOBEC3F-203ENST00000476513 FLT3P36888 993 aa16.6■□□□□ 0.25
APOBEC3F-203ENST00000476513 SERINC3Q13530 473 aa16.6■□□□□ 0.25
APOBEC3F-203ENST00000476513 HLTFQ14527 1009 aaKnown RBP eCLIP16.6■□□□□ 0.25
APOBEC3F-203ENST00000476513 TMEM52BQ4KMG9 183 aa16.6■□□□□ 0.25
APOBEC3F-203ENST00000476513 C14orf28Q4W4Y0 310 aa16.6■□□□□ 0.25
APOBEC3F-203ENST00000476513 TRNP1Q6NT89 227 aa16.6■□□□□ 0.25
APOBEC3F-203ENST00000476513 BNIPLQ7Z465 357 aa16.6■□□□□ 0.25
APOBEC3F-203ENST00000476513 FAM131BQ86XD5 332 aa16.6■□□□□ 0.25
APOBEC3F-203ENST00000476513 WDR92Q96MX6 357 aa16.6■□□□□ 0.25
APOBEC3F-203ENST00000476513 GDAP1L1Q96MZ0 367 aa16.6■□□□□ 0.25
APOBEC3F-203ENST00000476513 PSMG3-AS1Q96PY0 264 aa16.6■□□□□ 0.25
APOBEC3F-203ENST00000476513 DKK3Q9UBP4 350 aa16.6■□□□□ 0.25
APOBEC3F-203ENST00000476513 TUBD1Q9UJT1 453 aa16.6■□□□□ 0.25
APOBEC3F-203ENST00000476513 ANAPC2Q9UJX6 822 aa16.6■□□□□ 0.25
APOBEC3F-203ENST00000476513 MAN1B1Q9UKM7 699 aa16.6■□□□□ 0.25
APOBEC3F-203ENST00000476513 CTNND2Q9UQB3 1225 aa16.6■□□□□ 0.25
APOBEC3F-203ENST00000476513 DGKBQ9Y6T7 804 aa16.6■□□□□ 0.25
APOBEC3F-203ENST00000476513 DOCK4Q8N1I0 1966 aa16.59■□□□□ 0.25
APOBEC3F-203ENST00000476513 BICDL2A1A5D9 508 aa16.59■□□□□ 0.25
APOBEC3F-203ENST00000476513 BMP6P22004 513 aa16.59■□□□□ 0.25
APOBEC3F-203ENST00000476513 SCNN1AP37088 669 aa16.59■□□□□ 0.25
APOBEC3F-203ENST00000476513 GABRB2P47870 512 aa16.59■□□□□ 0.25
APOBEC3F-203ENST00000476513 ATP1A2P50993 1020 aa16.59■□□□□ 0.25
APOBEC3F-203ENST00000476513 ARSDP51689 593 aa16.59■□□□□ 0.25
APOBEC3F-203ENST00000476513 STX17P56962 302 aa16.59■□□□□ 0.25
APOBEC3F-203ENST00000476513 B4GALNT1Q00973 533 aa16.59■□□□□ 0.25
APOBEC3F-203ENST00000476513 ARHGEF7Q14155 803 aa16.59■□□□□ 0.25
APOBEC3F-203ENST00000476513 MAP9Q49MG5 647 aa16.59■□□□□ 0.25
APOBEC3F-203ENST00000476513 C4orf17Q53FE4 359 aa16.59■□□□□ 0.25
APOBEC3F-203ENST00000476513 EFHC2Q5JST6 749 aa16.59■□□□□ 0.25
APOBEC3F-203ENST00000476513 FAM102AQ5T9C2 384 aaPredicted RBP16.59■□□□□ 0.25
APOBEC3F-203ENST00000476513 TAF8Q7Z7C8 310 aa16.59■□□□□ 0.25
APOBEC3F-203ENST00000476513 SLC47A2Q86VL8 602 aa16.59■□□□□ 0.25
APOBEC3F-203ENST00000476513 NLRP14Q86W24 1093 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms