RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 RHOQP17081 205 aa12.74□□□□□ -0.37
SKA3-206ENST00000475251 SLC9A1P19634 815 aa12.74□□□□□ -0.37
SKA3-206ENST00000475251 GKP32189 559 aa12.74□□□□□ -0.37
SKA3-206ENST00000475251 GABRB2P47870 512 aa12.74□□□□□ -0.37
SKA3-206ENST00000475251 STX17P56962 302 aa12.74□□□□□ -0.37
SKA3-206ENST00000475251 NRG1Q02297 640 aaPredicted RBP12.74□□□□□ -0.37
SKA3-206ENST00000475251 MORC3Q14149 939 aa12.74□□□□□ -0.37
SKA3-206ENST00000475251 NFATC4Q14934 902 aa12.74□□□□□ -0.37
SKA3-206ENST00000475251 TBR1Q16650 682 aa12.74□□□□□ -0.37
SKA3-206ENST00000475251 KLHL40Q2TBA0 621 aa12.74□□□□□ -0.37
SKA3-206ENST00000475251 ENPP7Q6UWV6 458 aa12.74□□□□□ -0.37
SKA3-206ENST00000475251 CREBRFQ8IUR6 639 aa12.74□□□□□ -0.37
SKA3-206ENST00000475251 ADNPQ9H2P0 1102 aa12.74□□□□□ -0.37
SKA3-206ENST00000475251 MBNL1Q9NR56 388 aaKnown RBP12.74□□□□□ -0.37
SKA3-206ENST00000475251 TMPRSS4Q9NRS4 437 aa12.74□□□□□ -0.37
SKA3-206ENST00000475251 GEMIN8Q9NWZ8 242 aaKnown RBP12.74□□□□□ -0.37
SKA3-206ENST00000475251 DKK3Q9UBP4 350 aa12.74□□□□□ -0.37
SKA3-206ENST00000475251 KLQ9UEF7 1012 aa12.74□□□□□ -0.37
SKA3-206ENST00000475251 RABGEF1Q9UJ41 708 aa12.74□□□□□ -0.37
SKA3-206ENST00000475251 PRAMEF33A0A0G2JMD5 474 aa12.73□□□□□ -0.37
SKA3-206ENST00000475251 CASC3O15234 703 aaKnown RBP12.73□□□□□ -0.37
SKA3-206ENST00000475251 PRAMEF10O60809 474 aa12.73□□□□□ -0.37
SKA3-206ENST00000475251 RAMP2O60895 175 aa12.73□□□□□ -0.37
SKA3-206ENST00000475251 IGSF6O95976 241 aa12.73□□□□□ -0.37
SKA3-206ENST00000475251 TNFP01375 233 aa12.73□□□□□ -0.37
SKA3-206ENST00000475251 CELA2BP08218 269 aaPredicted RBP12.73□□□□□ -0.37
SKA3-206ENST00000475251 PON1P27169 355 aa12.73□□□□□ -0.37
SKA3-206ENST00000475251 CDH5P33151 784 aaPredicted RBP12.73□□□□□ -0.37
SKA3-206ENST00000475251 ACVRL1P37023 503 aa12.73□□□□□ -0.37
SKA3-206ENST00000475251 SRP54P61011 504 aaKnown RBP12.73□□□□□ -0.37
SKA3-206ENST00000475251 NFKB2Q00653 900 aa12.73□□□□□ -0.37
SKA3-206ENST00000475251 ZFP36L1Q07352 338 aaKnown RBP12.73□□□□□ -0.37
SKA3-206ENST00000475251 IRF4Q15306 451 aa12.73□□□□□ -0.37
SKA3-206ENST00000475251 ALG11Q2TAA5 492 aa12.73□□□□□ -0.37
SKA3-206ENST00000475251 RWDD4Q6NW29 188 aaKnown RBP12.73□□□□□ -0.37
SKA3-206ENST00000475251 ARCQ7LC44 396 aa12.73□□□□□ -0.37
SKA3-206ENST00000475251 RD3Q7Z3Z2 195 aa12.73□□□□□ -0.37
SKA3-206ENST00000475251 SLC47A2Q86VL8 602 aa12.73□□□□□ -0.37
SKA3-206ENST00000475251 FAM131BQ86XD5 332 aa12.73□□□□□ -0.37
SKA3-206ENST00000475251 TSACCQ96A04 125 aaPredicted RBP12.73□□□□□ -0.37
SKA3-206ENST00000475251 WDR92Q96MX6 357 aa12.73□□□□□ -0.37
SKA3-206ENST00000475251 RBM15Q96T37 977 aaKnown RBP eCLIP12.73□□□□□ -0.37
SKA3-206ENST00000475251 WRAP53Q9BUR4 548 aaKnown RBP12.73□□□□□ -0.37
SKA3-206ENST00000475251 TTYH3Q9C0H2 523 aa12.73□□□□□ -0.37
SKA3-206ENST00000475251 PLCB1Q9NQ66 1216 aa12.73□□□□□ -0.37
SKA3-206ENST00000475251 TMEM248Q9NWD8 314 aa12.73□□□□□ -0.37
SKA3-206ENST00000475251 OR12D3Q9UGF7 316 aa12.73□□□□□ -0.37
SKA3-206ENST00000475251 DNAJC12Q9UKB3 198 aa12.73□□□□□ -0.37
SKA3-206ENST00000475251 MFHAS1Q9Y4C4 1052 aa12.73□□□□□ -0.37
SKA3-206ENST00000475251 ACTL7AQ9Y615 435 aa12.73□□□□□ -0.37
SKA3-206ENST00000475251 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.72□□□□□ -0.37
SKA3-206ENST00000475251 KDELR3O43731 214 aa12.72□□□□□ -0.37
SKA3-206ENST00000475251 ITIH1P19827 911 aa12.72□□□□□ -0.37
SKA3-206ENST00000475251 BMP6P22004 513 aa12.72□□□□□ -0.37
SKA3-206ENST00000475251 KELP23276 732 aa12.72□□□□□ -0.37
SKA3-206ENST00000475251 CLCN1P35523 988 aa12.72□□□□□ -0.37
SKA3-206ENST00000475251 FLT3P36888 993 aa12.72□□□□□ -0.37
SKA3-206ENST00000475251 ATP1A2P50993 1020 aa12.72□□□□□ -0.37
SKA3-206ENST00000475251 MAPK10P53779 464 aa12.72□□□□□ -0.37
SKA3-206ENST00000475251 TLE1Q04724 770 aa12.72□□□□□ -0.37
SKA3-206ENST00000475251 SRSF6Q13247 344 aaKnown RBP12.72□□□□□ -0.37
SKA3-206ENST00000475251 ARHGEF7Q14155 803 aa12.72□□□□□ -0.37
SKA3-206ENST00000475251 GRM3Q14832 879 aa12.72□□□□□ -0.37
SKA3-206ENST00000475251 TMEM52BQ4KMG9 183 aa12.72□□□□□ -0.37
SKA3-206ENST00000475251 INO80DQ53TQ3 878 aaPredicted RBP12.72□□□□□ -0.37
SKA3-206ENST00000475251 CERCAMQ5T4B2 595 aa12.72□□□□□ -0.37
SKA3-206ENST00000475251 BNIPLQ7Z465 357 aa12.72□□□□□ -0.37
SKA3-206ENST00000475251 VASH2Q86V25 355 aa12.72□□□□□ -0.37
SKA3-206ENST00000475251 DTX1Q86Y01 620 aa12.72□□□□□ -0.37
SKA3-206ENST00000475251 ZNF354CQ86Y25 554 aa12.72□□□□□ -0.37
SKA3-206ENST00000475251 XYLT1Q86Y38 959 aa12.72□□□□□ -0.37
SKA3-206ENST00000475251 GPR156Q8NFN8 814 aa12.72□□□□□ -0.37
SKA3-206ENST00000475251 HCAR2Q8TDS4 363 aa12.72□□□□□ -0.37
SKA3-206ENST00000475251 USP7Q93009 1102 aa12.72□□□□□ -0.37
SKA3-206ENST00000475251 CFAP57Q96MR6 1250 aa12.72□□□□□ -0.37
SKA3-206ENST00000475251 NCAPGQ9BPX3 1015 aa12.72□□□□□ -0.37
SKA3-206ENST00000475251 APOOQ9BUR5 198 aa12.72□□□□□ -0.37
SKA3-206ENST00000475251 DNAI1Q9UI46 699 aa12.72□□□□□ -0.37
SKA3-206ENST00000475251 DGKBQ9Y6T7 804 aa12.72□□□□□ -0.37
SKA3-206ENST00000475251 RNF215Q9Y6U7 377 aa12.72□□□□□ -0.37
SKA3-206ENST00000475251 SCN8AQ9UQD0 1980 aa12.72□□□□□ -0.37
SKA3-206ENST00000475251 GOLGA8SH3BPF8 625 aa12.71□□□□□ -0.37
SKA3-206ENST00000475251 STMND1H3BQB6 276 aa12.71□□□□□ -0.37
SKA3-206ENST00000475251 FOXN3O00409 490 aaPredicted RBP12.71□□□□□ -0.37
SKA3-206ENST00000475251 BUB1O43683 1085 aa12.71□□□□□ -0.37
SKA3-206ENST00000475251 NUDT21O43809 227 aaKnown RBP12.71□□□□□ -0.37
SKA3-206ENST00000475251 TMCC1O94876 653 aa12.71□□□□□ -0.37
SKA3-206ENST00000475251 LSM8O95777 96 aaKnown RBP12.71□□□□□ -0.37
SKA3-206ENST00000475251 PRKCSHP14314 528 aaPredicted RBP12.71□□□□□ -0.37
SKA3-206ENST00000475251 RHOAP61586 193 aa12.71□□□□□ -0.37
SKA3-206ENST00000475251 MTM1Q13496 603 aa12.71□□□□□ -0.37
SKA3-206ENST00000475251 INPP5AQ14642 412 aa12.71□□□□□ -0.37
SKA3-206ENST00000475251 AGERQ15109 404 aa12.71□□□□□ -0.37
SKA3-206ENST00000475251 CLPPQ16740 277 aaPredicted RBP12.71□□□□□ -0.37
SKA3-206ENST00000475251 WSCD2Q2TBF2 565 aa12.71□□□□□ -0.37
SKA3-206ENST00000475251 MAP9Q49MG5 647 aa12.71□□□□□ -0.37
SKA3-206ENST00000475251 C14orf28Q4W4Y0 310 aa12.71□□□□□ -0.37
SKA3-206ENST00000475251 LRRC73Q5JTD7 316 aa12.71□□□□□ -0.37
SKA3-206ENST00000475251 ARTNQ5T4W7 220 aa12.71□□□□□ -0.37
SKA3-206ENST00000475251 CFAP58Q5T655 872 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms