RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 GEMIN4P57678 1058 aaKnown RBP7.07□□□□□ -1.28
LIMD1-204ENST00000474665 TAS2R38P59533 333 aa7.07□□□□□ -1.28
LIMD1-204ENST00000474665 EIF3EP60228 445 aaKnown RBP7.07□□□□□ -1.28
LIMD1-204ENST00000474665 RHOAP61586 193 aa7.07□□□□□ -1.28
LIMD1-204ENST00000474665 SIM1P81133 766 aaPredicted RBP7.07□□□□□ -1.28
LIMD1-204ENST00000474665 DSC2Q02487 901 aa7.07□□□□□ -1.28
LIMD1-204ENST00000474665 KCNC4Q03721 635 aa7.07□□□□□ -1.28
LIMD1-204ENST00000474665 ZNF33AQ06730 810 aa7.07□□□□□ -1.28
LIMD1-204ENST00000474665 NSUN2Q08J23 767 aaKnown RBP eCLIP7.07□□□□□ -1.28
LIMD1-204ENST00000474665 AP1B1Q10567 949 aa7.07□□□□□ -1.28
LIMD1-204ENST00000474665 CNTN1Q12860 1018 aa7.07□□□□□ -1.28
LIMD1-204ENST00000474665 XRCC4Q13426 336 aa7.07□□□□□ -1.28
LIMD1-204ENST00000474665 RFTN1Q14699 578 aaPredicted RBP7.07□□□□□ -1.28
LIMD1-204ENST00000474665 STARD3Q14849 445 aa7.07□□□□□ -1.28
LIMD1-204ENST00000474665 CST6Q15828 149 aa7.07□□□□□ -1.28
LIMD1-204ENST00000474665 TEX44Q53QW1 395 aa7.07□□□□□ -1.28
LIMD1-204ENST00000474665 ODF2Q5BJF6 829 aa7.07□□□□□ -1.28
LIMD1-204ENST00000474665 SLC45A4Q5BKX6 768 aa7.07□□□□□ -1.28
LIMD1-204ENST00000474665 ARSIQ5FYB1 569 aa7.07□□□□□ -1.28
LIMD1-204ENST00000474665 PIP5KL1Q5T9C9 394 aa7.07□□□□□ -1.28
LIMD1-204ENST00000474665 MARC1Q5VT66 337 aa7.07□□□□□ -1.28
LIMD1-204ENST00000474665 ZNF776Q68DI1 518 aaPredicted RBP7.07□□□□□ -1.28
LIMD1-204ENST00000474665 NCEH1Q6PIU2 408 aa7.07□□□□□ -1.28
LIMD1-204ENST00000474665 SRLQ86TD4 932 aa7.07□□□□□ -1.28
LIMD1-204ENST00000474665 METTL3Q86U44 580 aaKnown RBP7.07□□□□□ -1.28
LIMD1-204ENST00000474665 PRPF39Q86UA1 669 aaKnown RBP7.07□□□□□ -1.28
LIMD1-204ENST00000474665 WDR5BQ86VZ2 330 aa7.07□□□□□ -1.28
LIMD1-204ENST00000474665 CAMK1DQ8IU85 385 aa7.07□□□□□ -1.28
LIMD1-204ENST00000474665 CREG2Q8IUH2 290 aa7.07□□□□□ -1.28
LIMD1-204ENST00000474665 GLIS1Q8NBF1 620 aa7.07□□□□□ -1.28
LIMD1-204ENST00000474665 CCNYQ8ND76 341 aa7.07□□□□□ -1.28
LIMD1-204ENST00000474665 TMIEQ8NEW7 156 aa7.07□□□□□ -1.28
LIMD1-204ENST00000474665 PIP4K2CQ8TBX8 421 aa7.07□□□□□ -1.28
LIMD1-204ENST00000474665 GRIN3AQ8TCU5 1115 aa7.07□□□□□ -1.28
LIMD1-204ENST00000474665 TFB1MQ8WVM0 346 aaKnown RBP7.07□□□□□ -1.28
LIMD1-204ENST00000474665 OR8D1Q8WZ84 308 aa7.07□□□□□ -1.28
LIMD1-204ENST00000474665 TADA1Q96BN2 335 aa7.07□□□□□ -1.28
LIMD1-204ENST00000474665 SIPA1Q96FS4 1042 aa7.07□□□□□ -1.28
LIMD1-204ENST00000474665 TEKT5Q96M29 485 aa7.07□□□□□ -1.28
LIMD1-204ENST00000474665 GDAP1L1Q96MZ0 367 aa7.07□□□□□ -1.28
LIMD1-204ENST00000474665 SMIM14Q96QK8 99 aa7.07□□□□□ -1.28
LIMD1-204ENST00000474665 HEPHQ9BQS7 1158 aa7.07□□□□□ -1.28
LIMD1-204ENST00000474665 CPEB1Q9BZB8 566 aaKnown RBP7.07□□□□□ -1.28
LIMD1-204ENST00000474665 BRD8Q9H0E9 1235 aa7.07□□□□□ -1.28
LIMD1-204ENST00000474665 PABPC3Q9H361 631 aaKnown RBP7.07□□□□□ -1.28
LIMD1-204ENST00000474665 POLMQ9NP87 494 aaPredicted RBP7.07□□□□□ -1.28
LIMD1-204ENST00000474665 NT5MQ9NPB1 228 aa7.07□□□□□ -1.28
LIMD1-204ENST00000474665 ITM2CQ9NQX7 267 aa7.07□□□□□ -1.28
LIMD1-204ENST00000474665 RBM22Q9NW64 420 aaKnown RBP eCLIP7.07□□□□□ -1.28
LIMD1-204ENST00000474665 SEPT3Q9UH03 358 aa7.07□□□□□ -1.28
LIMD1-204ENST00000474665 ATP8A1Q9Y2Q0 1164 aa7.07□□□□□ -1.28
LIMD1-204ENST00000474665 PCDHGA5Q9Y5G8 931 aa7.07□□□□□ -1.28
LIMD1-204ENST00000474665 IGHV1OR15-9A0A0B4J2B8 117 aa7.06□□□□□ -1.28
LIMD1-204ENST00000474665 TSPAN11A1L157 253 aa7.06□□□□□ -1.28
LIMD1-204ENST00000474665 HACD1B0YJ81 288 aa7.06□□□□□ -1.28
LIMD1-204ENST00000474665 KRIT1O00522 736 aa7.06□□□□□ -1.28
LIMD1-204ENST00000474665 PPP1R12AO14974 1030 aaPredicted RBP7.06□□□□□ -1.28
LIMD1-204ENST00000474665 ZBTB24O43167 697 aaPredicted RBP7.06□□□□□ -1.28
LIMD1-204ENST00000474665 HTRA2O43464 458 aaPredicted RBP7.06□□□□□ -1.28
LIMD1-204ENST00000474665 LIASO43766 372 aa7.06□□□□□ -1.28
LIMD1-204ENST00000474665 RPP40O75818 363 aaKnown RBP7.06□□□□□ -1.28
LIMD1-204ENST00000474665 PIGNO95427 931 aa7.06□□□□□ -1.28
LIMD1-204ENST00000474665 IL1BP01584 269 aa7.06□□□□□ -1.28
LIMD1-204ENST00000474665 UGT2B4P06133 528 aa7.06□□□□□ -1.28
LIMD1-204ENST00000474665 TIMP2P16035 220 aa7.06□□□□□ -1.28
LIMD1-204ENST00000474665 PRLRP16471 622 aa7.06□□□□□ -1.28
LIMD1-204ENST00000474665 ITIH2P19823 946 aa7.06□□□□□ -1.28
LIMD1-204ENST00000474665 ACSL1P33121 698 aa7.06□□□□□ -1.28
LIMD1-204ENST00000474665 P2RY2P41231 377 aa7.06□□□□□ -1.28
LIMD1-204ENST00000474665 KCNJ1P48048 391 aa7.06□□□□□ -1.28
LIMD1-204ENST00000474665 SCNN1BP51168 640 aa7.06□□□□□ -1.28
LIMD1-204ENST00000474665 RENBPP51606 427 aa7.06□□□□□ -1.28
LIMD1-204ENST00000474665 SNRPD1P62314 119 aaKnown RBP7.06□□□□□ -1.28
LIMD1-204ENST00000474665 SKOR1P84550 965 aa7.06□□□□□ -1.28
LIMD1-204ENST00000474665 TRAF2Q12933 501 aa7.06□□□□□ -1.28
LIMD1-204ENST00000474665 PTPRRQ15256 657 aa7.06□□□□□ -1.28
LIMD1-204ENST00000474665 E2F5Q15329 346 aa7.06□□□□□ -1.28
LIMD1-204ENST00000474665 SEL1L2Q5TEA6 688 aa7.06□□□□□ -1.28
LIMD1-204ENST00000474665 AGBL4Q5VU57 503 aa7.06□□□□□ -1.28
LIMD1-204ENST00000474665 TTC27Q6P3X3 843 aa7.06□□□□□ -1.28
LIMD1-204ENST00000474665 KIAA1324Q6UXG2 1013 aaKnown RBP7.06□□□□□ -1.28
LIMD1-204ENST00000474665 SYT10Q6XYQ8 523 aa7.06□□□□□ -1.28
LIMD1-204ENST00000474665 PRUNE1Q86TP1 453 aa7.06□□□□□ -1.28
LIMD1-204ENST00000474665 ZNF567Q8N184 647 aa7.06□□□□□ -1.28
LIMD1-204ENST00000474665 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.06□□□□□ -1.28
LIMD1-204ENST00000474665 FAM71DQ8N9W8 422 aa7.06□□□□□ -1.28
LIMD1-204ENST00000474665 ACTRT1Q8TDG2 376 aa7.06□□□□□ -1.28
LIMD1-204ENST00000474665 GAB3Q8WWW8 586 aa7.06□□□□□ -1.28
LIMD1-204ENST00000474665 HTR3CQ8WXA8 447 aa7.06□□□□□ -1.28
LIMD1-204ENST00000474665 SPOCK2Q92563 424 aa7.06□□□□□ -1.28
LIMD1-204ENST00000474665 ECHDC3Q96DC8 303 aa7.06□□□□□ -1.28
LIMD1-204ENST00000474665 OXNAD1Q96HP4 312 aaPredicted RBP7.06□□□□□ -1.28
LIMD1-204ENST00000474665 PBKQ96KB5 322 aa7.06□□□□□ -1.28
LIMD1-204ENST00000474665 C16orf45Q96MC5 204 aaPredicted RBP7.06□□□□□ -1.28
LIMD1-204ENST00000474665 KLHL32Q96NJ5 620 aa7.06□□□□□ -1.28
LIMD1-204ENST00000474665 AGAP3Q96P47 875 aa7.06□□□□□ -1.28
LIMD1-204ENST00000474665 NUDCD1Q96RS6 583 aa7.06□□□□□ -1.28
LIMD1-204ENST00000474665 NAPGQ99747 312 aaPredicted RBP7.06□□□□□ -1.28
LIMD1-204ENST00000474665 SEMA3CQ99985 751 aa7.06□□□□□ -1.28
LIMD1-204ENST00000474665 TMEM121Q9BTD3 319 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms