RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 AGPAT3Q9NRZ7 376 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 CLIC5Q9NZA1 410 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 SIX4Q9UIU6 781 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 FBXO2Q9UK22 296 aaPredicted RBP3.66□□□□□ -1.82
XRN1-209ENST00000472625 SCML1Q9UN30 329 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 SCML2Q9UQR0 700 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 FRMD4BQ9Y2L6 1034 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 SLC27A6Q9Y2P4 619 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 IGF2RP11717 2491 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 PKD1L2Q7Z442 2459 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 PTPRJQ12913 1337 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 ATXN2Q99700 1313 aaKnown RBP3.66□□□□□ -1.82
XRN1-209ENST00000472625 CACNA1GO43497 2377 aa3.66□□□□□ -1.82
XRN1-209ENST00000472625 IGHV1OR15-9A0A0B4J2B8 117 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 SPAARA0A1B0GVQ0 90 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 PVALEFA0A1B0GWK0 134 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 A0A1W2PQF6 199 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 GOLGA8IPA6NC78 632 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 GOLGA8JA6NMD2 632 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 TISP43B9A030 160 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 TAF4O00268 1085 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 CAPN9O14815 690 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 MAPK13O15264 365 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 BCAT2O15382 392 aaPredicted RBP3.65□□□□□ -1.83
XRN1-209ENST00000472625 RRP8O43159 456 aaKnown RBP3.65□□□□□ -1.83
XRN1-209ENST00000472625 OPA1O60313 960 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 MAGEC1O60732 1142 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 RNASEH1O60930 286 aaKnown RBP3.65□□□□□ -1.83
XRN1-209ENST00000472625 DTNBO60941 627 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 YEATS4O95619 227 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 LATS1O95835 1130 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 IGLV3-19P01714 112 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 ATP5BP06576 529 aaKnown RBP3.65□□□□□ -1.83
XRN1-209ENST00000472625 C1SP09871 688 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 C6P13671 934 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 HLA-EP13747 358 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 GABRG2P18507 467 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 LMO2P25791 158 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 NUDT1P36639 197 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 ETV4P43268 484 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 ABCG1P45844 678 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 ARRB1P49407 418 aaPredicted RBP3.65□□□□□ -1.83
XRN1-209ENST00000472625 HARS2P49590 506 aaKnown RBP3.65□□□□□ -1.83
XRN1-209ENST00000472625 CYP2J2P51589 502 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 BCAT1P54687 386 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 YWHAEP62258 255 aaKnown RBP3.65□□□□□ -1.83
XRN1-209ENST00000472625 ADAM8P78325 824 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 ALDH6A1Q02252 535 aaKnown RBP3.65□□□□□ -1.83
XRN1-209ENST00000472625 INCA1Q0VD86 236 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 GRIK2Q13002 908 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 MYBPC3Q14896 1274 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 SLC39A14Q15043 492 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 TCEA2Q15560 299 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 KNOP1Q1ED39 458 aaKnown RBP3.65□□□□□ -1.83
XRN1-209ENST00000472625 RNF151Q2KHN1 245 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 HS1BP3Q53T59 392 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 SLC45A4Q5BKX6 768 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 C10orf120Q5SQS8 335 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 ATL3Q6DD88 541 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 KIAA1324Q6UXG2 1013 aaKnown RBP3.65□□□□□ -1.83
XRN1-209ENST00000472625 SERPINA13PQ6UXR4 307 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 CCNI2Q6ZMN8 369 aaPredicted RBP3.65□□□□□ -1.83
XRN1-209ENST00000472625 TOGARAM2Q6ZUX3 1019 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 UNC13DQ70J99 1090 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 INTS8Q75QN2 995 aaKnown RBP3.65□□□□□ -1.83
XRN1-209ENST00000472625 RSRC2Q7L4I2 434 aaKnown RBP3.65□□□□□ -1.83
XRN1-209ENST00000472625 CCDC186Q7Z3E2 898 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 CIR1Q86X95 450 aaPredicted RBP3.65□□□□□ -1.83
XRN1-209ENST00000472625 BBS7Q8IWZ6 715 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 REXO1L1PQ8IX06 675 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 CEP57L1Q8IYX8 460 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 NXPE1Q8N323 547 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 SLC16A11Q8NCK7 471 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 OR5B17Q8NGF7 314 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 SLC2A14Q8TDB8 520 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 WFIKKN2Q8TEU8 576 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 SETD7Q8WTS6 366 aaKnown RBP3.65□□□□□ -1.83
XRN1-209ENST00000472625 RLN3Q8WXF3 142 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 DNASE2BQ8WZ79 361 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 CCDC127Q96BQ5 260 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 SIPA1Q96FS4 1042 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 EPSTI1Q96J88 318 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 MRGPRX1Q96LB2 322 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 GNRHR2Q96P88 292 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 GBP4Q96PP9 640 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 DDX50Q9BQ39 737 aaKnown RBP3.65□□□□□ -1.83
XRN1-209ENST00000472625 TRIM62Q9BVG3 475 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 C1QTNF3Q9BXJ4 246 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 ZNF518BQ9C0D4 1074 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 KLC2Q9H0B6 622 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 LINC00597Q9H2U6 94 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 PCIF1Q9H4Z3 704 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 ZMAT4Q9H898 229 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 CYP3A43Q9HB55 503 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 SGK2Q9HBY8 427 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 CSNK1G1Q9HCP0 422 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 TM7SF3Q9NS93 570 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 OLA1Q9NTK5 396 aaKnown RBP3.65□□□□□ -1.83
XRN1-209ENST00000472625 TMEM74BQ9NUR3 256 aa3.65□□□□□ -1.83
XRN1-209ENST00000472625 EXOC1Q9NV70 894 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms