RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 MMAAQ8IVH4 418 aaKnown RBP8.63□□□□□ -1.03
CD47-204ENST00000471694 HIST1H2AAQ96QV6 131 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 KCNK16Q96T55 309 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 FBXL12Q9NXK8 326 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 CDC14AQ9UNH5 594 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 NWD1Q149M9 1564 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.63□□□□□ -1.03
CD47-204ENST00000471694 SSU72P8A0A1W2PR75 194 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 A8MUA0 341 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 FAM25AB3EWG3 89 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 FAM25CB3EWG5 89 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 FAM25GB3EWG6 89 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 DCLK1O15075 740 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 ASLP04424 464 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 PGAM1P18669 254 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 LPOP22079 712 aaPredicted RBP8.63□□□□□ -1.03
CD47-204ENST00000471694 S100A3P33764 101 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 MAGEA10P43363 369 aaPredicted RBP8.63□□□□□ -1.03
CD47-204ENST00000471694 CAPZA1P52907 286 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 C1QBPQ07021 282 aaKnown RBP8.63□□□□□ -1.03
CD47-204ENST00000471694 MGAT5Q09328 741 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 PRKG2Q13237 762 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 SEL1L3Q68CR1 1132 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 TCEAL6Q6IPX3 200 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 KCTD8Q6ZWB6 473 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 UBE2J2Q8N2K1 259 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 BPIFB1Q8TDL5 484 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 RIT1Q92963 219 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 COPS8Q99627 209 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 SPATA5L1Q9BVQ7 753 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 NECTIN3Q9NQS3 549 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 IL17RBQ9NRM6 502 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 SMIM31A0A1B0GVY4 71 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 MAGEB3O15480 346 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 GGCXP38435 758 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 POLD2P49005 469 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 DLK2Q6UY11 383 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 DTX3LQ8TDB6 740 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 PLD4Q96BZ4 506 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 TBCBQ99426 244 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 SFXN1Q9H9B4 322 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 SUSD2Q9UGT4 822 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 ANGPT4Q9Y264 503 aa8.63□□□□□ -1.03
CD47-204ENST00000471694 TMEM150CB9EJG8 249 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 TEAD2Q15562 447 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 ARHGAP40Q5TG30 622 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 ZNF776Q68DI1 518 aaPredicted RBP8.62□□□□□ -1.03
CD47-204ENST00000471694 C2orf15Q8WU43 125 aaKnown RBP8.62□□□□□ -1.03
CD47-204ENST00000471694 COMMD8Q9NX08 183 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 NCKIPSDQ9NZQ3 722 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 TNPO3Q9Y5L0 923 aaKnown RBP8.62□□□□□ -1.03
CD47-204ENST00000471694 FRMPD4Q14CM0 1322 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 SLC35G6P0C7Q6 338 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 NEK5Q6P3R8 708 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 UBR7Q8N806 425 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 PRR11Q96HE9 360 aaPredicted RBP8.62□□□□□ -1.03
CD47-204ENST00000471694 BTN2A3PQ96KV6 586 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 POMKQ9H5K3 350 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 NAALADL1Q9UQQ1 740 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 LOC100653049A0A140TA62 436 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 TPST1O60507 370 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 KRT34O76011 436 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 POP4O95707 220 aaKnown RBP8.62□□□□□ -1.03
CD47-204ENST00000471694 SLC5A3P53794 718 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 IRX1P78414 480 aaPredicted RBP8.62□□□□□ -1.03
CD47-204ENST00000471694 PTSQ03393 145 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 ANKRD52Q8NB46 1076 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 UXS1Q8NBZ7 420 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 KLHL32Q96NJ5 620 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 VAT1Q99536 393 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 DUSP16Q9BY84 665 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 TMCO1Q9UM00 188 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 IQCMA0A1B0GVH7 501 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 A0A1B0GW55 424 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 PAGE1O75459 146 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 DUX4L2P0CJ85 424 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 DUX4L3P0CJ86 424 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 DUX4L4P0CJ87 422 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 DUX4L5P0CJ88 424 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 DUX4L6P0CJ89 424 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 DUX4L7P0CJ90 424 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 ZNF23P17027 643 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 CNTFP26441 200 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 ACTR1BP42025 376 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 ACTR1AP61163 376 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 PDSS1Q5T2R2 415 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 WLSQ5T9L3 541 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 ZNF852Q6ZMS4 543 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 TMEM26Q6ZUK4 368 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 UBE2R2Q712K3 238 aaPredicted RBP8.62□□□□□ -1.03
CD47-204ENST00000471694 SMYD1Q8NB12 490 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 FAM81AQ8TBF8 368 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 KCNV2Q8TDN2 545 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 CYB5D2Q8WUJ1 264 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 USP6NLQ92738 828 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 MTERF3Q96E29 417 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 RNFT2Q96EX2 444 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 B3GALT6Q96L58 329 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 FAM111AQ96PZ2 611 aa8.62□□□□□ -1.03
CD47-204ENST00000471694 MCMBPQ9BTE3 642 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms