RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 KCNU1A8MYU2 1149 aa13.76□□□□□ -0.21
BRCA1-209ENST00000470026 AURKAO14965 403 aa13.76□□□□□ -0.21
BRCA1-209ENST00000470026 IPO13O94829 963 aaKnown RBP13.76□□□□□ -0.21
BRCA1-209ENST00000470026 PAPSS2O95340 614 aaPredicted RBP13.76□□□□□ -0.21
BRCA1-209ENST00000470026 PENKP01210 267 aaPredicted RBP13.76□□□□□ -0.21
BRCA1-209ENST00000470026 ODC1P11926 461 aa13.76□□□□□ -0.21
BRCA1-209ENST00000470026 KCNA5P22460 613 aa13.76□□□□□ -0.21
BRCA1-209ENST00000470026 MSX2P35548 267 aaPredicted RBP13.76□□□□□ -0.21
BRCA1-209ENST00000470026 CHRNA4P43681 627 aa13.76□□□□□ -0.21
BRCA1-209ENST00000470026 PSME3P61289 254 aa13.76□□□□□ -0.21
BRCA1-209ENST00000470026 BEX3Q00994 111 aa13.76□□□□□ -0.21
BRCA1-209ENST00000470026 TRIM25Q14258 630 aaKnown RBP13.76□□□□□ -0.21
BRCA1-209ENST00000470026 MAPRE2Q15555 327 aa13.76□□□□□ -0.21
BRCA1-209ENST00000470026 FAM83EQ2M2I3 478 aa13.76□□□□□ -0.21
BRCA1-209ENST00000470026 RBM20Q5T481 1227 aaKnown RBP13.76□□□□□ -0.21
BRCA1-209ENST00000470026 C9orf131Q5VYM1 1079 aa13.76□□□□□ -0.21
BRCA1-209ENST00000470026 RTL3Q8N8U3 475 aaKnown RBP13.76□□□□□ -0.21
BRCA1-209ENST00000470026 CALML6Q8TD86 181 aa13.76□□□□□ -0.21
BRCA1-209ENST00000470026 DGCR14Q96DF8 476 aaKnown RBP13.76□□□□□ -0.21
BRCA1-209ENST00000470026 FCRL2Q96LA5 508 aaPredicted RBP13.76□□□□□ -0.21
BRCA1-209ENST00000470026 MRPL1Q9BYD6 325 aaKnown RBP13.76□□□□□ -0.21
BRCA1-209ENST00000470026 SIK2Q9H0K1 926 aa13.76□□□□□ -0.21
BRCA1-209ENST00000470026 TNFRSF12AQ9NP84 129 aa13.76□□□□□ -0.21
BRCA1-209ENST00000470026 ABCC13Q9NSE7 274 aa13.76□□□□□ -0.21
BRCA1-209ENST00000470026 PADI4Q9UM07 663 aa13.76□□□□□ -0.21
BRCA1-209ENST00000470026 TRPV2Q9Y5S1 764 aa13.76□□□□□ -0.21
BRCA1-209ENST00000470026 TRPM7Q96QT4 1865 aa13.76□□□□□ -0.21
BRCA1-209ENST00000470026 HEATR9A2RTY3 570 aa13.75□□□□□ -0.21
BRCA1-209ENST00000470026 M0QZQ0 153 aa13.75□□□□□ -0.21
BRCA1-209ENST00000470026 FBP2O00757 339 aa13.75□□□□□ -0.21
BRCA1-209ENST00000470026 PMPCBO75439 489 aa13.75□□□□□ -0.21
BRCA1-209ENST00000470026 RNASEH2AO75792 299 aaKnown RBP13.75□□□□□ -0.21
BRCA1-209ENST00000470026 IGHA2P01877 340 aa13.75□□□□□ -0.21
BRCA1-209ENST00000470026 LTA4HP09960 611 aaKnown RBP13.75□□□□□ -0.21
BRCA1-209ENST00000470026 ZNF26P17031 533 aaPredicted RBP13.75□□□□□ -0.21
BRCA1-209ENST00000470026 CCR1P32246 355 aa13.75□□□□□ -0.21
BRCA1-209ENST00000470026 SCNN1GP51170 649 aa13.75□□□□□ -0.21
BRCA1-209ENST00000470026 PURAQ00577 322 aaKnown RBP13.75□□□□□ -0.21
BRCA1-209ENST00000470026 MYBPC1Q00872 1141 aa13.75□□□□□ -0.21
BRCA1-209ENST00000470026 TRAP1Q12931 704 aaKnown RBP13.75□□□□□ -0.21
BRCA1-209ENST00000470026 STX5Q13190 355 aa13.75□□□□□ -0.21
BRCA1-209ENST00000470026 APOFQ13790 326 aa13.75□□□□□ -0.21
BRCA1-209ENST00000470026 CSHL1Q14406 222 aa13.75□□□□□ -0.21
BRCA1-209ENST00000470026 AGAP9Q5VTM2 703 aa13.75□□□□□ -0.21
BRCA1-209ENST00000470026 IRAK1BP1Q5VVH5 260 aa13.75□□□□□ -0.21
BRCA1-209ENST00000470026 ZNF280DQ6N043 979 aa13.75□□□□□ -0.21
BRCA1-209ENST00000470026 HACD2Q6Y1H2 254 aa13.75□□□□□ -0.21
BRCA1-209ENST00000470026 GK5Q6ZS86 529 aa13.75□□□□□ -0.21
BRCA1-209ENST00000470026 LPPQ93052 612 aa13.75□□□□□ -0.21
BRCA1-209ENST00000470026 ZFRQ96KR1 1074 aaKnown RBP13.75□□□□□ -0.21
BRCA1-209ENST00000470026 UHRF1Q96T88 793 aaPredicted RBP13.75□□□□□ -0.21
BRCA1-209ENST00000470026 PTPN18Q99952 460 aa13.75□□□□□ -0.21
BRCA1-209ENST00000470026 FSD1LQ9BXM9 530 aa13.75□□□□□ -0.21
BRCA1-209ENST00000470026 MRPS26Q9BYN8 205 aaKnown RBP13.75□□□□□ -0.21
BRCA1-209ENST00000470026 RBM38Q9H0Z9 239 aaKnown RBP13.75□□□□□ -0.21
BRCA1-209ENST00000470026 SLC25A51Q9H1U9 297 aa13.75□□□□□ -0.21
BRCA1-209ENST00000470026 EML4Q9HC35 981 aaKnown RBP13.75□□□□□ -0.21
BRCA1-209ENST00000470026 CACNA2D2Q9NY47 1150 aa13.75□□□□□ -0.21
BRCA1-209ENST00000470026 CD300AQ9UGN4 299 aa13.75□□□□□ -0.21
BRCA1-209ENST00000470026 CASTOR2A6NHX0 329 aa13.75□□□□□ -0.21
BRCA1-209ENST00000470026 TNFRSF10BO14763 440 aa13.75□□□□□ -0.21
BRCA1-209ENST00000470026 TNFAIP8O95379 198 aa13.75□□□□□ -0.21
BRCA1-209ENST00000470026 RBP1P09455 135 aa13.75□□□□□ -0.21
BRCA1-209ENST00000470026 HNRNPLP14866 589 aaKnown RBP eCLIP13.75□□□□□ -0.21
BRCA1-209ENST00000470026 SLC26A3P40879 764 aa13.75□□□□□ -0.21
BRCA1-209ENST00000470026 ATP4BP51164 291 aa13.75□□□□□ -0.21
BRCA1-209ENST00000470026 SLC12A2P55011 1212 aa13.75□□□□□ -0.21
BRCA1-209ENST00000470026 WNT3AP56704 352 aa13.75□□□□□ -0.21
BRCA1-209ENST00000470026 C1QTNF8P60827 252 aa13.75□□□□□ -0.21
BRCA1-209ENST00000470026 CDKL1Q00532 357 aa13.75□□□□□ -0.21
BRCA1-209ENST00000470026 ACAP2Q15057 778 aa13.75□□□□□ -0.21
BRCA1-209ENST00000470026 ZNF789Q5FWF6 425 aa13.75□□□□□ -0.21
BRCA1-209ENST00000470026 CUZD1Q86UP6 607 aa13.75□□□□□ -0.21
BRCA1-209ENST00000470026 LRRTM3Q86VH5 581 aa13.75□□□□□ -0.21
BRCA1-209ENST00000470026 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.75□□□□□ -0.21
BRCA1-209ENST00000470026 RNF148Q8N7C7 305 aa13.75□□□□□ -0.21
BRCA1-209ENST00000470026 SCAMP5Q8TAC9 235 aa13.75□□□□□ -0.21
BRCA1-209ENST00000470026 TMA16Q96EY4 203 aaKnown RBP13.75□□□□□ -0.21
BRCA1-209ENST00000470026 IMP4Q96G21 291 aaKnown RBP13.75□□□□□ -0.21
BRCA1-209ENST00000470026 TRMOQ9BU70 441 aa13.75□□□□□ -0.21
BRCA1-209ENST00000470026 NOL6Q9H6R4 1146 aaKnown RBP13.75□□□□□ -0.21
BRCA1-209ENST00000470026 PCDHGB4Q9UN71 923 aa13.75□□□□□ -0.21
BRCA1-209ENST00000470026 LZTS1Q9Y250 596 aa13.75□□□□□ -0.21
BRCA1-209ENST00000470026 PCDHGB5Q9Y5G0 923 aa13.75□□□□□ -0.21
BRCA1-209ENST00000470026 DOCK3Q8IZD9 2030 aa13.74□□□□□ -0.21
BRCA1-209ENST00000470026 E7ENX8 843 aa13.74□□□□□ -0.21
BRCA1-209ENST00000470026 VILLO15195 856 aa13.74□□□□□ -0.21
BRCA1-209ENST00000470026 OR6B1O95007 311 aa13.74□□□□□ -0.21
BRCA1-209ENST00000470026 PAX3P23760 479 aa13.74□□□□□ -0.21
BRCA1-209ENST00000470026 RGS2P41220 211 aa13.74□□□□□ -0.21
BRCA1-209ENST00000470026 RHDQ02161 417 aa13.74□□□□□ -0.21
BRCA1-209ENST00000470026 TNK2Q07912 1038 aa13.74□□□□□ -0.21
BRCA1-209ENST00000470026 REP15Q6BDI9 236 aa13.74□□□□□ -0.21
BRCA1-209ENST00000470026 CYHR1Q6ZMK1 362 aa13.74□□□□□ -0.21
BRCA1-209ENST00000470026 SCD5Q86SK9 330 aa13.74□□□□□ -0.21
BRCA1-209ENST00000470026 SLC22A9Q8IVM8 553 aa13.74□□□□□ -0.21
BRCA1-209ENST00000470026 AFAP1L2Q8N4X5 818 aa13.74□□□□□ -0.21
BRCA1-209ENST00000470026 OR10T2Q8NGX3 314 aa13.74□□□□□ -0.21
BRCA1-209ENST00000470026 CASP10Q92851 521 aa13.74□□□□□ -0.21
BRCA1-209ENST00000470026 SGF29Q96ES7 293 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms