RNA–Protein interactions for RNA: ENST00000469976.2

LDHA-208, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 656 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-208ENST00000469976 SIRPB2Q5JXA9 342 aa11.3□□□□□ -0.6
LDHA-208ENST00000469976 SLC8B1Q6J4K2 584 aa11.3□□□□□ -0.6
LDHA-208ENST00000469976 TMC7Q7Z402 723 aa11.3□□□□□ -0.6
LDHA-208ENST00000469976 RNF168Q8IYW5 571 aaPredicted RBP11.3□□□□□ -0.6
LDHA-208ENST00000469976 LGI2Q8N0V4 545 aa11.3□□□□□ -0.6
LDHA-208ENST00000469976 GPATCH11Q8N954 259 aa11.3□□□□□ -0.6
LDHA-208ENST00000469976 FBXO22Q8NEZ5 403 aa11.3□□□□□ -0.6
LDHA-208ENST00000469976 OR13J1Q8NGT2 312 aa11.3□□□□□ -0.6
LDHA-208ENST00000469976 GPR150Q8NGU9 434 aa11.3□□□□□ -0.6
LDHA-208ENST00000469976 GIPC2Q8TF65 315 aa11.3□□□□□ -0.6
LDHA-208ENST00000469976 BCL7CQ8WUZ0 217 aaPredicted RBP11.3□□□□□ -0.6
LDHA-208ENST00000469976 SCG3Q8WXD2 468 aaKnown RBP11.3□□□□□ -0.6
LDHA-208ENST00000469976 NXNL1Q96CM4 212 aa11.3□□□□□ -0.6
LDHA-208ENST00000469976 CMTM5Q96DZ9 223 aa11.3□□□□□ -0.6
LDHA-208ENST00000469976 RSRC1Q96IZ7 334 aaKnown RBP11.3□□□□□ -0.6
LDHA-208ENST00000469976 FAM161BQ96MY7 647 aa11.3□□□□□ -0.6
LDHA-208ENST00000469976 OMDQ99983 421 aa11.3□□□□□ -0.6
LDHA-208ENST00000469976 ATXN3LQ9H3M9 355 aa11.3□□□□□ -0.6
LDHA-208ENST00000469976 CCSER2Q9H7U1 834 aa11.3□□□□□ -0.6
LDHA-208ENST00000469976 GPBP1L1Q9HC44 474 aaPredicted RBP11.3□□□□□ -0.6
LDHA-208ENST00000469976 TRPC7Q9HCX4 862 aa11.3□□□□□ -0.6
LDHA-208ENST00000469976 CPSF2Q9P2I0 782 aaKnown RBP11.3□□□□□ -0.6
LDHA-208ENST00000469976 XPR1Q9UBH6 696 aa11.3□□□□□ -0.6
LDHA-208ENST00000469976 STOML1Q9UBI4 398 aa11.3□□□□□ -0.6
LDHA-208ENST00000469976 UXTQ9UBK9 157 aaPredicted RBP11.3□□□□□ -0.6
LDHA-208ENST00000469976 ZNF106Q9H2Y7 1883 aaKnown RBP11.29□□□□□ -0.6
LDHA-208ENST00000469976 ENTPD5O75356 428 aa11.29□□□□□ -0.6
LDHA-208ENST00000469976 WISP3O95389 354 aaPredicted RBP11.29□□□□□ -0.6
LDHA-208ENST00000469976 PIGNO95427 931 aa11.29□□□□□ -0.6
LDHA-208ENST00000469976 RBP1P09455 135 aa11.29□□□□□ -0.6
LDHA-208ENST00000469976 LTA4HP09960 611 aaKnown RBP11.29□□□□□ -0.6
LDHA-208ENST00000469976 ACVRL1P37023 503 aa11.29□□□□□ -0.6
LDHA-208ENST00000469976 SLC11A2P49281 568 aa11.29□□□□□ -0.6
LDHA-208ENST00000469976 PFKPQ01813 784 aa11.29□□□□□ -0.6
LDHA-208ENST00000469976 GNA12Q03113 381 aa11.29□□□□□ -0.6
LDHA-208ENST00000469976 USP4Q13107 963 aa11.29□□□□□ -0.6
LDHA-208ENST00000469976 KLF10Q13118 480 aa11.29□□□□□ -0.6
LDHA-208ENST00000469976 RFTN1Q14699 578 aaPredicted RBP11.29□□□□□ -0.6
LDHA-208ENST00000469976 FAM83EQ2M2I3 478 aa11.29□□□□□ -0.6
LDHA-208ENST00000469976 USP41Q3LFD5 358 aa11.29□□□□□ -0.6
LDHA-208ENST00000469976 KHDC1Q4VXA5 237 aaKnown RBP11.29□□□□□ -0.6
LDHA-208ENST00000469976 SLC9B1Q4ZJI4 515 aa11.29□□□□□ -0.6
LDHA-208ENST00000469976 HECTD2Q5U5R9 776 aa11.29□□□□□ -0.6
LDHA-208ENST00000469976 AGAP9Q5VTM2 703 aa11.29□□□□□ -0.6
LDHA-208ENST00000469976 SEL1L3Q68CR1 1132 aa11.29□□□□□ -0.6
LDHA-208ENST00000469976 FAM45BPQ6NSW5 357 aa11.29□□□□□ -0.6
LDHA-208ENST00000469976 KLC3Q6P597 504 aa11.29□□□□□ -0.6
LDHA-208ENST00000469976 CNSTQ6PJW8 725 aa11.29□□□□□ -0.6
LDHA-208ENST00000469976 ACAD11Q709F0 780 aa11.29□□□□□ -0.6
LDHA-208ENST00000469976 CHST9Q7L1S5 443 aa11.29□□□□□ -0.6
LDHA-208ENST00000469976 TAS1R1Q7RTX1 841 aa11.29□□□□□ -0.6
LDHA-208ENST00000469976 PIWIL4Q7Z3Z4 852 aaKnown RBP11.29□□□□□ -0.6
LDHA-208ENST00000469976 SETD3Q86TU7 594 aaPredicted RBP11.29□□□□□ -0.6
LDHA-208ENST00000469976 CIR1Q86X95 450 aaPredicted RBP11.29□□□□□ -0.6
LDHA-208ENST00000469976 CILP2Q8IUL8 1156 aa11.29□□□□□ -0.6
LDHA-208ENST00000469976 ULK2Q8IYT8 1036 aa11.29□□□□□ -0.6
LDHA-208ENST00000469976 KIRREL3Q8IZU9 778 aa11.29□□□□□ -0.6
LDHA-208ENST00000469976 CPSF7Q8N684 471 aaKnown RBP11.29□□□□□ -0.6
LDHA-208ENST00000469976 GIMAP7Q8NHV1 300 aa11.29□□□□□ -0.6
LDHA-208ENST00000469976 FBXO27Q8NI29 283 aa11.29□□□□□ -0.6
LDHA-208ENST00000469976 FAM45AQ8TCE6 357 aa11.29□□□□□ -0.6
LDHA-208ENST00000469976 STMN2Q93045 179 aa11.29□□□□□ -0.6
LDHA-208ENST00000469976 IFT43Q96FT9 208 aa11.29□□□□□ -0.6
LDHA-208ENST00000469976 FAR2Q96K12 515 aa11.29□□□□□ -0.6
LDHA-208ENST00000469976 CNDP1Q96KN2 507 aa11.29□□□□□ -0.6
LDHA-208ENST00000469976 SEMA3CQ99985 751 aa11.29□□□□□ -0.6
LDHA-208ENST00000469976 GPAMQ9HCL2 828 aa11.29□□□□□ -0.6
LDHA-208ENST00000469976 TCF7L2Q9NQB0 619 aa11.29□□□□□ -0.6
LDHA-208ENST00000469976 IGSF5Q9NSI5 407 aa11.29□□□□□ -0.6
LDHA-208ENST00000469976 SEPT3Q9UH03 358 aa11.29□□□□□ -0.6
LDHA-208ENST00000469976 AFF4Q9UHB7 1163 aaKnown RBP11.29□□□□□ -0.6
LDHA-208ENST00000469976 LRRC42Q9Y546 428 aa11.29□□□□□ -0.6
LDHA-208ENST00000469976 MRPL42Q9Y6G3 142 aaKnown RBP11.29□□□□□ -0.6
LDHA-208ENST00000469976 HELZP42694 1942 aaKnown RBP11.29□□□□□ -0.6
LDHA-208ENST00000469976 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.28□□□□□ -0.6
LDHA-208ENST00000469976 NT5C1B-RDH14C9J2C7 533 aa11.28□□□□□ -0.6
LDHA-208ENST00000469976 GRID2O43424 1007 aa11.28□□□□□ -0.6
LDHA-208ENST00000469976 LDB2O43679 373 aa11.28□□□□□ -0.6
LDHA-208ENST00000469976 KDELR3O43731 214 aa11.28□□□□□ -0.6
LDHA-208ENST00000469976 CLDN11O75508 207 aa11.28□□□□□ -0.6
LDHA-208ENST00000469976 RPP40O75818 363 aaKnown RBP11.28□□□□□ -0.6
LDHA-208ENST00000469976 NDST3O95803 873 aa11.28□□□□□ -0.6
LDHA-208ENST00000469976 CHRNGP07510 517 aa11.28□□□□□ -0.6
LDHA-208ENST00000469976 COX4I1P13073 169 aa11.28□□□□□ -0.6
LDHA-208ENST00000469976 NCF2P19878 526 aaPredicted RBP11.28□□□□□ -0.6
LDHA-208ENST00000469976 OGNP20774 298 aaKnown RBP11.28□□□□□ -0.6
LDHA-208ENST00000469976 CES1P23141 567 aa11.28□□□□□ -0.6
LDHA-208ENST00000469976 PSMA3P25788 255 aa11.28□□□□□ -0.6
LDHA-208ENST00000469976 HOXD9P28356 352 aaPredicted RBP11.28□□□□□ -0.6
LDHA-208ENST00000469976 SLC6A4P31645 630 aa11.28□□□□□ -0.6
LDHA-208ENST00000469976 MAP2K2P36507 400 aa11.28□□□□□ -0.6
LDHA-208ENST00000469976 VHLP40337 213 aa11.28□□□□□ -0.6
LDHA-208ENST00000469976 GLRBP48167 497 aa11.28□□□□□ -0.6
LDHA-208ENST00000469976 KCNQ1P51787 676 aa11.28□□□□□ -0.6
LDHA-208ENST00000469976 NAGLUP54802 743 aa11.28□□□□□ -0.6
LDHA-208ENST00000469976 PRAMEP78395 509 aa11.28□□□□□ -0.6
LDHA-208ENST00000469976 SATB1Q01826 763 aa11.28□□□□□ -0.6
LDHA-208ENST00000469976 BTKQ06187 659 aa11.28□□□□□ -0.6
LDHA-208ENST00000469976 SLC34A1Q06495 639 aa11.28□□□□□ -0.6
LDHA-208ENST00000469976 NSUN2Q08J23 767 aaKnown RBP eCLIP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms