RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 PIK3CAP42336 1068 aa6.59□□□□□ -1.35
PTCD3-208ENST00000469585 LHX1P48742 406 aa6.59□□□□□ -1.35
PTCD3-208ENST00000469585 SUMO3P55854 103 aaPredicted RBP6.59□□□□□ -1.35
PTCD3-208ENST00000469585 YWHAEP62258 255 aaKnown RBP6.59□□□□□ -1.35
PTCD3-208ENST00000469585 TPM4P67936 248 aa6.59□□□□□ -1.35
PTCD3-208ENST00000469585 HSD11B2P80365 405 aa6.59□□□□□ -1.35
PTCD3-208ENST00000469585 FKBP3Q00688 224 aaKnown RBP6.59□□□□□ -1.35
PTCD3-208ENST00000469585 FMO1Q01740 532 aa6.59□□□□□ -1.35
PTCD3-208ENST00000469585 PTPN14Q15678 1187 aa6.59□□□□□ -1.35
PTCD3-208ENST00000469585 EDRF1Q3B7T1 1238 aa6.59□□□□□ -1.35
PTCD3-208ENST00000469585 LEXMQ3ZCV2 418 aa6.59□□□□□ -1.35
PTCD3-208ENST00000469585 PPM1LQ5SGD2 360 aa6.59□□□□□ -1.35
PTCD3-208ENST00000469585 SPATA1Q5VX52 437 aa6.59□□□□□ -1.35
PTCD3-208ENST00000469585 B3GNTL1Q67FW5 361 aaPredicted RBP6.59□□□□□ -1.35
PTCD3-208ENST00000469585 KLHL10Q6JEL2 608 aa6.59□□□□□ -1.35
PTCD3-208ENST00000469585 SPATA31D4Q6ZUB0 917 aa6.59□□□□□ -1.35
PTCD3-208ENST00000469585 C11orf96Q7Z7L8 435 aa6.59□□□□□ -1.35
PTCD3-208ENST00000469585 C12orf56Q8IXR9 622 aa6.59□□□□□ -1.35
PTCD3-208ENST00000469585 FAM186BQ8IYM0 893 aa6.59□□□□□ -1.35
PTCD3-208ENST00000469585 TMEM86AQ8N2M4 240 aa6.59□□□□□ -1.35
PTCD3-208ENST00000469585 LRRC52Q8N7C0 313 aa6.59□□□□□ -1.35
PTCD3-208ENST00000469585 OR6B3Q8NGW1 331 aa6.59□□□□□ -1.35
PTCD3-208ENST00000469585 HDAC7Q8WUI4 952 aa6.59□□□□□ -1.35
PTCD3-208ENST00000469585 SCFD1Q8WVM8 642 aa6.59□□□□□ -1.35
PTCD3-208ENST00000469585 DHTKD1Q96HY7 919 aaPredicted RBP6.59□□□□□ -1.35
PTCD3-208ENST00000469585 LRIG1Q96JA1 1093 aa6.59□□□□□ -1.35
PTCD3-208ENST00000469585 ASB2Q96Q27 587 aa6.59□□□□□ -1.35
PTCD3-208ENST00000469585 CBWD1Q9BRT8 395 aa6.59□□□□□ -1.35
PTCD3-208ENST00000469585 CNPPD1Q9BV87 410 aa6.59□□□□□ -1.35
PTCD3-208ENST00000469585 ZNF700Q9H0M5 742 aa6.59□□□□□ -1.35
PTCD3-208ENST00000469585 SNX25Q9H3E2 840 aa6.59□□□□□ -1.35
PTCD3-208ENST00000469585 GOLPH3LQ9H4A5 285 aa6.59□□□□□ -1.35
PTCD3-208ENST00000469585 ETAA1Q9NY74 926 aa6.59□□□□□ -1.35
PTCD3-208ENST00000469585 EHD2Q9NZN4 543 aa6.59□□□□□ -1.35
PTCD3-208ENST00000469585 CTTNBP2NLQ9P2B4 639 aa6.59□□□□□ -1.35
PTCD3-208ENST00000469585 CDYLQ9Y232 598 aa6.59□□□□□ -1.35
PTCD3-208ENST00000469585 TCHHQ07283 1943 aa6.58□□□□□ -1.36
PTCD3-208ENST00000469585 GAGE12BA1L429 117 aa6.58□□□□□ -1.36
PTCD3-208ENST00000469585 GAGE12HA6NDE8 117 aa6.58□□□□□ -1.36
PTCD3-208ENST00000469585 KPNA7A9QM74 516 aa6.58□□□□□ -1.36
PTCD3-208ENST00000469585 C1QTNF3-AMACRE9PGA6 284 aa6.58□□□□□ -1.36
PTCD3-208ENST00000469585 BTN3A1O00481 513 aa6.58□□□□□ -1.36
PTCD3-208ENST00000469585 PES1O00541 588 aaKnown RBP6.58□□□□□ -1.36
PTCD3-208ENST00000469585 CYB561D2O14569 222 aa6.58□□□□□ -1.36
PTCD3-208ENST00000469585 IKBKBO14920 756 aa6.58□□□□□ -1.36
PTCD3-208ENST00000469585 MAPK13O15264 365 aa6.58□□□□□ -1.36
PTCD3-208ENST00000469585 SLC16A3O15427 465 aaKnown RBP6.58□□□□□ -1.36
PTCD3-208ENST00000469585 UNC5CO95185 931 aa6.58□□□□□ -1.36
PTCD3-208ENST00000469585 LETM1O95202 739 aaPredicted RBP6.58□□□□□ -1.36
PTCD3-208ENST00000469585 FGF19O95750 216 aa6.58□□□□□ -1.36
PTCD3-208ENST00000469585 HNRNPA1P09651 372 aaKnown RBP eCLIP6.58□□□□□ -1.36
PTCD3-208ENST00000469585 PIM1P11309 404 aaPredicted RBP6.58□□□□□ -1.36
PTCD3-208ENST00000469585 BRAFP15056 766 aa6.58□□□□□ -1.36
PTCD3-208ENST00000469585 RPL17P18621 184 aaKnown RBP6.58□□□□□ -1.36
PTCD3-208ENST00000469585 TYMPP19971 482 aa6.58□□□□□ -1.36
PTCD3-208ENST00000469585 CASP1P29466 404 aa6.58□□□□□ -1.36
PTCD3-208ENST00000469585 ATICP31939 592 aa6.58□□□□□ -1.36
PTCD3-208ENST00000469585 PIK3CBP42338 1070 aa6.58□□□□□ -1.36
PTCD3-208ENST00000469585 VAMP7P51809 220 aa6.58□□□□□ -1.36
PTCD3-208ENST00000469585 CASP5P51878 434 aa6.58□□□□□ -1.36
PTCD3-208ENST00000469585 NEK3P51956 506 aa6.58□□□□□ -1.36
PTCD3-208ENST00000469585 SLC8A3P57103 927 aa6.58□□□□□ -1.36
PTCD3-208ENST00000469585 SPAG1Q07617 926 aa6.58□□□□□ -1.36
PTCD3-208ENST00000469585 CYP24A1Q07973 514 aa6.58□□□□□ -1.36
PTCD3-208ENST00000469585 HYAL1Q12794 435 aa6.58□□□□□ -1.36
PTCD3-208ENST00000469585 STK4Q13043 487 aa6.58□□□□□ -1.36
PTCD3-208ENST00000469585 PSMD6Q15008 389 aa6.58□□□□□ -1.36
PTCD3-208ENST00000469585 CAMK4Q16566 473 aa6.58□□□□□ -1.36
PTCD3-208ENST00000469585 XKR4Q5GH76 650 aa6.58□□□□□ -1.36
PTCD3-208ENST00000469585 SYCP2LQ5T4T6 812 aa6.58□□□□□ -1.36
PTCD3-208ENST00000469585 C9orf57Q5W0N0 161 aa6.58□□□□□ -1.36
PTCD3-208ENST00000469585 TPGS2Q68CL5 300 aa6.58□□□□□ -1.36
PTCD3-208ENST00000469585 ALKAL1Q6UXT8 129 aa6.58□□□□□ -1.36
PTCD3-208ENST00000469585 ZNF783Q6ZMS7 281 aa6.58□□□□□ -1.36
PTCD3-208ENST00000469585 C4orf50Q6ZRC1 276 aa6.58□□□□□ -1.36
PTCD3-208ENST00000469585 ITIH5Q86UX2 942 aa6.58□□□□□ -1.36
PTCD3-208ENST00000469585 PALB2Q86YC2 1186 aa6.58□□□□□ -1.36
PTCD3-208ENST00000469585 TMEM132CQ8N3T6 1108 aa6.58□□□□□ -1.36
PTCD3-208ENST00000469585 TTC39CQ8N584 583 aa6.58□□□□□ -1.36
PTCD3-208ENST00000469585 MLKLQ8NB16 471 aa6.58□□□□□ -1.36
PTCD3-208ENST00000469585 SPATA18Q8TC71 538 aa6.58□□□□□ -1.36
PTCD3-208ENST00000469585 C2orf15Q8WU43 125 aaKnown RBP6.58□□□□□ -1.36
PTCD3-208ENST00000469585 C18orf25Q96B23 403 aaPredicted RBP6.58□□□□□ -1.36
PTCD3-208ENST00000469585 HPDLQ96IR7 371 aa6.58□□□□□ -1.36
PTCD3-208ENST00000469585 KLHL5Q96PQ7 755 aa6.58□□□□□ -1.36
PTCD3-208ENST00000469585 MED15Q96RN5 788 aa6.58□□□□□ -1.36
PTCD3-208ENST00000469585 FIZ1Q96SL8 496 aa6.58□□□□□ -1.36
PTCD3-208ENST00000469585 MTMR12Q9C0I1 747 aa6.58□□□□□ -1.36
PTCD3-208ENST00000469585 SIK2Q9H0K1 926 aa6.58□□□□□ -1.36
PTCD3-208ENST00000469585 PDE11AQ9HCR9 933 aa6.58□□□□□ -1.36
PTCD3-208ENST00000469585 PARPBPQ9NWS1 579 aa6.58□□□□□ -1.36
PTCD3-208ENST00000469585 MIOSQ9NXC5 875 aa6.58□□□□□ -1.36
PTCD3-208ENST00000469585 ZDHHC7Q9NXF8 308 aa6.58□□□□□ -1.36
PTCD3-208ENST00000469585 TUBGCP4Q9UGJ1 667 aa6.58□□□□□ -1.36
PTCD3-208ENST00000469585 ARMCX3Q9UH62 379 aaPredicted RBP6.58□□□□□ -1.36
PTCD3-208ENST00000469585 TRAF3IP3Q9Y228 551 aa6.58□□□□□ -1.36
PTCD3-208ENST00000469585 PLEKHM1Q9Y4G2 1056 aa6.58□□□□□ -1.36
PTCD3-208ENST00000469585 CDY1Q9Y6F8 540 aa6.58□□□□□ -1.36
PTCD3-208ENST00000469585 HIDE1A8MVS5 230 aa6.57□□□□□ -1.36
PTCD3-208ENST00000469585 H3BQ06 376 aaPredicted RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms