RNA–Protein interactions for RNA: ENST00000469087.1

RUNX1-213, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,790 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-213ENST00000469087 CES3Q6UWW8 571 aa12.94□□□□□ -0.34
RUNX1-213ENST00000469087 UNC5AQ6ZN44 842 aa12.94□□□□□ -0.34
RUNX1-213ENST00000469087 TMEM135Q86UB9 458 aa12.94□□□□□ -0.34
RUNX1-213ENST00000469087 KDM1BQ8NB78 822 aa12.94□□□□□ -0.34
RUNX1-213ENST00000469087 EZH1Q92800 747 aaPredicted RBP12.94□□□□□ -0.34
RUNX1-213ENST00000469087 RMDN1Q96DB5 314 aa12.94□□□□□ -0.34
RUNX1-213ENST00000469087 CFAP36Q96G28 342 aa12.94□□□□□ -0.34
RUNX1-213ENST00000469087 FCRL3Q96P31 734 aaPredicted RBP12.94□□□□□ -0.34
RUNX1-213ENST00000469087 SMIM14Q96QK8 99 aa12.94□□□□□ -0.34
RUNX1-213ENST00000469087 ACOX2Q99424 681 aa12.94□□□□□ -0.34
RUNX1-213ENST00000469087 CPEB1Q9BZB8 566 aaKnown RBP12.94□□□□□ -0.34
RUNX1-213ENST00000469087 TMEM245Q9H330 911 aa12.94□□□□□ -0.34
RUNX1-213ENST00000469087 THAP10Q9P2Z0 257 aaPredicted RBP12.94□□□□□ -0.34
RUNX1-213ENST00000469087 SLC8A2Q9UPR5 921 aa12.94□□□□□ -0.34
RUNX1-213ENST00000469087 STARD13Q9Y3M8 1113 aa12.94□□□□□ -0.34
RUNX1-213ENST00000469087 PCDHB9Q9Y5E1 797 aa12.94□□□□□ -0.34
RUNX1-213ENST00000469087 COL4A2P08572 1712 aa12.93□□□□□ -0.34
RUNX1-213ENST00000469087 MYLKQ15746 1914 aa12.93□□□□□ -0.34
RUNX1-213ENST00000469087 MAGEB16A2A368 324 aa12.93□□□□□ -0.34
RUNX1-213ENST00000469087 ANKRD66B4E2M5 251 aa12.93□□□□□ -0.34
RUNX1-213ENST00000469087 PIAS1O75925 651 aa12.93□□□□□ -0.34
RUNX1-213ENST00000469087 PRKCGP05129 697 aa12.93□□□□□ -0.34
RUNX1-213ENST00000469087 FGF1P05230 155 aa12.93□□□□□ -0.34
RUNX1-213ENST00000469087 PIRTP0C851 137 aa12.93□□□□□ -0.34
RUNX1-213ENST00000469087 HLA-EP13747 358 aa12.93□□□□□ -0.34
RUNX1-213ENST00000469087 MAPK8P45983 427 aa12.93□□□□□ -0.34
RUNX1-213ENST00000469087 FAM193AP78312 1265 aa12.93□□□□□ -0.34
RUNX1-213ENST00000469087 FNDC3BQ53EP0 1204 aaKnown RBP12.93□□□□□ -0.34
RUNX1-213ENST00000469087 NUDT18Q6ZVK8 323 aa12.93□□□□□ -0.34
RUNX1-213ENST00000469087 CCNJLQ8IV13 435 aa12.93□□□□□ -0.34
RUNX1-213ENST00000469087 MAFAQ8NHW3 353 aaPredicted RBP12.93□□□□□ -0.34
RUNX1-213ENST00000469087 FBF1Q8TES7 1133 aa12.93□□□□□ -0.34
RUNX1-213ENST00000469087 UCMAQ8WVF2 138 aa12.93□□□□□ -0.34
RUNX1-213ENST00000469087 PIH1D2Q8WWB5 315 aa12.93□□□□□ -0.34
RUNX1-213ENST00000469087 MFSD3Q96ES6 412 aa12.93□□□□□ -0.34
RUNX1-213ENST00000469087 KIFC1Q9BW19 673 aa12.93□□□□□ -0.34
RUNX1-213ENST00000469087 ZDHHC6Q9H6R6 413 aa12.93□□□□□ -0.34
RUNX1-213ENST00000469087 ATP13A3Q9H7F0 1226 aa12.93□□□□□ -0.34
RUNX1-213ENST00000469087 SAMD15Q9P1V8 674 aa12.93□□□□□ -0.34
RUNX1-213ENST00000469087 RABGEF1Q9UJ41 708 aa12.93□□□□□ -0.34
RUNX1-213ENST00000469087 SOX13Q9UN79 622 aa12.93□□□□□ -0.34
RUNX1-213ENST00000469087 PIAS3Q9Y6X2 628 aa12.93□□□□□ -0.34
RUNX1-213ENST00000469087 A0A087WUV0 522 aaPredicted RBP12.92□□□□□ -0.34
RUNX1-213ENST00000469087 TCRBV9S1A1TA0A576 114 aa12.92□□□□□ -0.34
RUNX1-213ENST00000469087 SHISA7A6NL88 538 aa12.92□□□□□ -0.34
RUNX1-213ENST00000469087 PGLSO95336 258 aa12.92□□□□□ -0.34
RUNX1-213ENST00000469087 POLBP06746 335 aa12.92□□□□□ -0.34
RUNX1-213ENST00000469087 ABHD2P08910 425 aa12.92□□□□□ -0.34
RUNX1-213ENST00000469087 ALADP13716 330 aa12.92□□□□□ -0.34
RUNX1-213ENST00000469087 TSHRP16473 764 aa12.92□□□□□ -0.34
RUNX1-213ENST00000469087 PGAM1P18669 254 aa12.92□□□□□ -0.34
RUNX1-213ENST00000469087 ADRA1DP25100 572 aa12.92□□□□□ -0.34
RUNX1-213ENST00000469087 NMBRP28336 390 aa12.92□□□□□ -0.34
RUNX1-213ENST00000469087 IL12RB1P42701 662 aa12.92□□□□□ -0.34
RUNX1-213ENST00000469087 RECQLP46063 649 aaPredicted RBP12.92□□□□□ -0.34
RUNX1-213ENST00000469087 RAD51Q06609 339 aa12.92□□□□□ -0.34
RUNX1-213ENST00000469087 TDGQ13569 410 aa12.92□□□□□ -0.34
RUNX1-213ENST00000469087 HNRNPA1L2Q32P51 320 aaKnown RBP12.92□□□□□ -0.34
RUNX1-213ENST00000469087 ANKRD20A4Q4UJ75 823 aa12.92□□□□□ -0.34
RUNX1-213ENST00000469087 ARMC12Q5T9G4 340 aa12.92□□□□□ -0.34
RUNX1-213ENST00000469087 EGFLAMQ63HQ2 1017 aa12.92□□□□□ -0.34
RUNX1-213ENST00000469087 STEAP4Q687X5 459 aa12.92□□□□□ -0.34
RUNX1-213ENST00000469087 PKN3Q6P5Z2 889 aa12.92□□□□□ -0.34
RUNX1-213ENST00000469087 LRIG3Q6UXM1 1119 aa12.92□□□□□ -0.34
RUNX1-213ENST00000469087 RALGPS2Q86X27 583 aaPredicted RBP12.92□□□□□ -0.34
RUNX1-213ENST00000469087 ZSWIM9Q86XI8 627 aa12.92□□□□□ -0.34
RUNX1-213ENST00000469087 UNC5BQ8IZJ1 945 aa12.92□□□□□ -0.34
RUNX1-213ENST00000469087 LPCAT1Q8NF37 534 aa12.92□□□□□ -0.34
RUNX1-213ENST00000469087 DNASE1L2Q92874 299 aa12.92□□□□□ -0.34
RUNX1-213ENST00000469087 TUBGCP5Q96RT8 1024 aa12.92□□□□□ -0.34
RUNX1-213ENST00000469087 HEPHQ9BQS7 1158 aa12.92□□□□□ -0.34
RUNX1-213ENST00000469087 NAT9Q9BTE0 207 aa12.92□□□□□ -0.34
RUNX1-213ENST00000469087 ADGRE3Q9BY15 652 aa12.92□□□□□ -0.34
RUNX1-213ENST00000469087 SUV39H2Q9H5I1 410 aa12.92□□□□□ -0.34
RUNX1-213ENST00000469087 FAM50BQ9Y247 325 aa12.92□□□□□ -0.34
RUNX1-213ENST00000469087 RPS6KL1Q9Y6S9 549 aa12.92□□□□□ -0.34
RUNX1-213ENST00000469087 MUC22E2RYF6 1773 aaPredicted RBP12.92□□□□□ -0.34
RUNX1-213ENST00000469087 ZCWPW2A0A1B0GU75 182 aa12.92□□□□□ -0.34
RUNX1-213ENST00000469087 FAM237BA0A1B0GVD1 139 aa12.92□□□□□ -0.34
RUNX1-213ENST00000469087 CCDC78A2IDD5 438 aa12.92□□□□□ -0.34
RUNX1-213ENST00000469087 SOCS5O75159 536 aa12.92□□□□□ -0.34
RUNX1-213ENST00000469087 C1QAP02745 245 aa12.92□□□□□ -0.34
RUNX1-213ENST00000469087 CTSLP07711 333 aa12.92□□□□□ -0.34
RUNX1-213ENST00000469087 HNRNPLP14866 589 aaKnown RBP eCLIP12.92□□□□□ -0.34
RUNX1-213ENST00000469087 CA4P22748 312 aa12.92□□□□□ -0.34
RUNX1-213ENST00000469087 SERPINA4P29622 427 aa12.92□□□□□ -0.34
RUNX1-213ENST00000469087 TNFRSF4P43489 277 aa12.92□□□□□ -0.34
RUNX1-213ENST00000469087 KIR2DL1P43626 348 aaPredicted RBP12.92□□□□□ -0.34
RUNX1-213ENST00000469087 ZNF844Q08AG5 666 aa12.92□□□□□ -0.34
RUNX1-213ENST00000469087 PON2Q15165 354 aa12.92□□□□□ -0.34
RUNX1-213ENST00000469087 QPCTQ16769 361 aa12.92□□□□□ -0.34
RUNX1-213ENST00000469087 ARSIQ5FYB1 569 aa12.92□□□□□ -0.34
RUNX1-213ENST00000469087 C9orf64Q5T6V5 341 aa12.92□□□□□ -0.34
RUNX1-213ENST00000469087 TRMT10BQ6PF06 316 aaKnown RBP12.92□□□□□ -0.34
RUNX1-213ENST00000469087 SERPINA13PQ6UXR4 307 aa12.92□□□□□ -0.34
RUNX1-213ENST00000469087 SUGP1Q8IWZ8 645 aaKnown RBP12.92□□□□□ -0.34
RUNX1-213ENST00000469087 MDGA1Q8NFP4 955 aa12.92□□□□□ -0.34
RUNX1-213ENST00000469087 GSDMBQ8TAX9 411 aa12.92□□□□□ -0.34
RUNX1-213ENST00000469087 BLOC1S5Q8TDH9 187 aa12.92□□□□□ -0.34
RUNX1-213ENST00000469087 ECHDC3Q96DC8 303 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms