RNA–Protein interactions for RNA: ENST00000468469.5

COMMD3-207, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 526 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-207ENST00000468469 B4GALNT4Q76KP1 1039 aa3.66□□□□□ -1.82
COMMD3-207ENST00000468469 ADAT2Q7Z6V5 191 aaKnown RBP3.66□□□□□ -1.82
COMMD3-207ENST00000468469 SRLQ86TD4 932 aa3.66□□□□□ -1.82
COMMD3-207ENST00000468469 ZC3H18Q86VM9 953 aaKnown RBP3.66□□□□□ -1.82
COMMD3-207ENST00000468469 ZSCAN30Q86W11 494 aa3.66□□□□□ -1.82
COMMD3-207ENST00000468469 HORMAD1Q86X24 394 aa3.66□□□□□ -1.82
COMMD3-207ENST00000468469 SYT12Q8IV01 421 aa3.66□□□□□ -1.82
COMMD3-207ENST00000468469 KIAA2013Q8IYS2 634 aa3.66□□□□□ -1.82
COMMD3-207ENST00000468469 TBC1D3Q8IZP1 549 aaPredicted RBP3.66□□□□□ -1.82
COMMD3-207ENST00000468469 ZCCHC9Q8N567 271 aaKnown RBP3.66□□□□□ -1.82
COMMD3-207ENST00000468469 DCLK2Q8N568 766 aa3.66□□□□□ -1.82
COMMD3-207ENST00000468469 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.66□□□□□ -1.82
COMMD3-207ENST00000468469 TEX26Q8N6G2 289 aa3.66□□□□□ -1.82
COMMD3-207ENST00000468469 GPR161Q8N6U8 529 aaKnown RBP3.66□□□□□ -1.82
COMMD3-207ENST00000468469 TTC13Q8NBP0 860 aa3.66□□□□□ -1.82
COMMD3-207ENST00000468469 LPCAT1Q8NF37 534 aa3.66□□□□□ -1.82
COMMD3-207ENST00000468469 ACTL9Q8TC94 416 aa3.66□□□□□ -1.82
COMMD3-207ENST00000468469 CXorf40AQ8TE69 158 aa3.66□□□□□ -1.82
COMMD3-207ENST00000468469 PDCD6IPQ8WUM4 868 aaKnown RBP3.66□□□□□ -1.82
COMMD3-207ENST00000468469 TFB1MQ8WVM0 346 aaKnown RBP3.66□□□□□ -1.82
COMMD3-207ENST00000468469 TCEAL3Q969E4 200 aa3.66□□□□□ -1.82
COMMD3-207ENST00000468469 FATE1Q969F0 183 aa3.66□□□□□ -1.82
COMMD3-207ENST00000468469 BIRC7Q96CA5 298 aa3.66□□□□□ -1.82
COMMD3-207ENST00000468469 ECHDC3Q96DC8 303 aa3.66□□□□□ -1.82
COMMD3-207ENST00000468469 ZNF641Q96N77 438 aaPredicted RBP3.66□□□□□ -1.82
COMMD3-207ENST00000468469 SLC6A18Q96N87 628 aa3.66□□□□□ -1.82
COMMD3-207ENST00000468469 TSGA13Q96PP4 275 aa3.66□□□□□ -1.82
COMMD3-207ENST00000468469 MYOCQ99972 504 aa3.66□□□□□ -1.82
COMMD3-207ENST00000468469 SEMA3CQ99985 751 aa3.66□□□□□ -1.82
COMMD3-207ENST00000468469 FERMT1Q9BQL6 677 aa3.66□□□□□ -1.82
COMMD3-207ENST00000468469 HERPUD2Q9BSE4 406 aa3.66□□□□□ -1.82
COMMD3-207ENST00000468469 EDEM2Q9BV94 578 aa3.66□□□□□ -1.82
COMMD3-207ENST00000468469 NUSAP1Q9BXS6 441 aaKnown RBP3.66□□□□□ -1.82
COMMD3-207ENST00000468469 TDRD1Q9BXT4 1180 aaKnown RBP3.66□□□□□ -1.82
COMMD3-207ENST00000468469 HDAC8Q9BY41 377 aa3.66□□□□□ -1.82
COMMD3-207ENST00000468469 CEP41Q9BYV8 373 aa3.66□□□□□ -1.82
COMMD3-207ENST00000468469 CPEB1Q9BZB8 566 aaKnown RBP3.66□□□□□ -1.82
COMMD3-207ENST00000468469 OSBPL8Q9BZF1 889 aa3.66□□□□□ -1.82
COMMD3-207ENST00000468469 SMOC1Q9H4F8 434 aa3.66□□□□□ -1.82
COMMD3-207ENST00000468469 PARD6AQ9NPB6 346 aa3.66□□□□□ -1.82
COMMD3-207ENST00000468469 AASDHPPTQ9NRN7 309 aa3.66□□□□□ -1.82
COMMD3-207ENST00000468469 SEMA4GQ9NTN9 838 aa3.66□□□□□ -1.82
COMMD3-207ENST00000468469 TMEM74BQ9NUR3 256 aa3.66□□□□□ -1.82
COMMD3-207ENST00000468469 RBM22Q9NW64 420 aaKnown RBP eCLIP3.66□□□□□ -1.82
COMMD3-207ENST00000468469 KLHL8Q9P2G9 620 aaPredicted RBP3.66□□□□□ -1.82
COMMD3-207ENST00000468469 DKK3Q9UBP4 350 aa3.66□□□□□ -1.82
COMMD3-207ENST00000468469 AMACRQ9UHK6 382 aa3.66□□□□□ -1.82
COMMD3-207ENST00000468469 EIF2B4Q9UI10 523 aaKnown RBP3.66□□□□□ -1.82
COMMD3-207ENST00000468469 GGT7Q9UJ14 662 aa3.66□□□□□ -1.82
COMMD3-207ENST00000468469 PILRBQ9UKJ0 227 aa3.66□□□□□ -1.82
COMMD3-207ENST00000468469 EFR3BQ9Y2G0 817 aa3.66□□□□□ -1.82
COMMD3-207ENST00000468469 ATP8A1Q9Y2Q0 1164 aa3.66□□□□□ -1.82
COMMD3-207ENST00000468469 PCDHGA10Q9Y5H3 936 aa3.66□□□□□ -1.82
COMMD3-207ENST00000468469 FADS3Q9Y5Q0 445 aa3.66□□□□□ -1.82
COMMD3-207ENST00000468469 PLXND1Q9Y4D7 1925 aa3.66□□□□□ -1.82
COMMD3-207ENST00000468469 A0A1W2PPC4 97 aa3.65□□□□□ -1.83
COMMD3-207ENST00000468469 A0A1W2PQ67 120 aa3.65□□□□□ -1.83
COMMD3-207ENST00000468469 A0A1W2PQU0 124 aa3.65□□□□□ -1.83
COMMD3-207ENST00000468469 LNP1A1A4G5 178 aa3.65□□□□□ -1.83
COMMD3-207ENST00000468469 TTC24A2A3L6 582 aaPredicted RBP3.65□□□□□ -1.83
COMMD3-207ENST00000468469 CAPN8A6NHC0 703 aa3.65□□□□□ -1.83
COMMD3-207ENST00000468469 NPIPB15A6NHN6 443 aaPredicted RBP3.65□□□□□ -1.83
COMMD3-207ENST00000468469 USP27XA6NNY8 438 aa3.65□□□□□ -1.83
COMMD3-207ENST00000468469 PRR5-ARHGAP8B1AHC4 643 aa3.65□□□□□ -1.83
COMMD3-207ENST00000468469 PATE3B3GLJ2 98 aa3.65□□□□□ -1.83
COMMD3-207ENST00000468469 F5H423 210 aaPredicted RBP3.65□□□□□ -1.83
COMMD3-207ENST00000468469 PRAMEF26H0Y7S4 382 aa3.65□□□□□ -1.83
COMMD3-207ENST00000468469 TRAFD1O14545 582 aaPredicted RBP3.65□□□□□ -1.83
COMMD3-207ENST00000468469 KCNK3O14649 394 aa3.65□□□□□ -1.83
COMMD3-207ENST00000468469 AREL1O15033 823 aa3.65□□□□□ -1.83
COMMD3-207ENST00000468469 BCAT2O15382 392 aaPredicted RBP3.65□□□□□ -1.83
COMMD3-207ENST00000468469 KCNN4O15554 427 aa3.65□□□□□ -1.83
COMMD3-207ENST00000468469 SPINT1O43278 529 aa3.65□□□□□ -1.83
COMMD3-207ENST00000468469 HTRA2O43464 458 aaPredicted RBP3.65□□□□□ -1.83
COMMD3-207ENST00000468469 LATO43561 262 aa3.65□□□□□ -1.83
COMMD3-207ENST00000468469 TSPAN6O43657 245 aa3.65□□□□□ -1.83
COMMD3-207ENST00000468469 AP1G1O43747 822 aa3.65□□□□□ -1.83
COMMD3-207ENST00000468469 FOXD2O60548 495 aaPredicted RBP3.65□□□□□ -1.83
COMMD3-207ENST00000468469 ZNF189O75820 626 aaPredicted RBP3.65□□□□□ -1.83
COMMD3-207ENST00000468469 STK10O94804 968 aaKnown RBP3.65□□□□□ -1.83
COMMD3-207ENST00000468469 PGLSO95336 258 aa3.65□□□□□ -1.83
COMMD3-207ENST00000468469 CER1O95813 267 aa3.65□□□□□ -1.83
COMMD3-207ENST00000468469 JCHAINP01591 159 aa3.65□□□□□ -1.83
COMMD3-207ENST00000468469 SYPP08247 313 aa3.65□□□□□ -1.83
COMMD3-207ENST00000468469 ELFN1P0C7U0 828 aa3.65□□□□□ -1.83
COMMD3-207ENST00000468469 ZNF806P0C7X5 589 aa3.65□□□□□ -1.83
COMMD3-207ENST00000468469 RBP3P10745 1247 aa3.65□□□□□ -1.83
COMMD3-207ENST00000468469 CYP2A6P11509 494 aaPredicted RBP3.65□□□□□ -1.83
COMMD3-207ENST00000468469 C6P13671 934 aa3.65□□□□□ -1.83
COMMD3-207ENST00000468469 PRLRP16471 622 aa3.65□□□□□ -1.83
COMMD3-207ENST00000468469 ENGP17813 658 aa3.65□□□□□ -1.83
COMMD3-207ENST00000468469 NFKB1P19838 968 aa3.65□□□□□ -1.83
COMMD3-207ENST00000468469 HNRNPA2B1P22626 353 aaKnown RBP3.65□□□□□ -1.83
COMMD3-207ENST00000468469 NFKBIAP25963 317 aa3.65□□□□□ -1.83
COMMD3-207ENST00000468469 RBL1P28749 1068 aa3.65□□□□□ -1.83
COMMD3-207ENST00000468469 AKT2P31751 481 aa3.65□□□□□ -1.83
COMMD3-207ENST00000468469 NUDT1P36639 197 aa3.65□□□□□ -1.83
COMMD3-207ENST00000468469 MMP12P39900 470 aa3.65□□□□□ -1.83
COMMD3-207ENST00000468469 CD86P42081 329 aa3.65□□□□□ -1.83
COMMD3-207ENST00000468469 TNNT3P45378 269 aaPredicted RBP3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms