RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 SATB2Q9UPW6 733 aa21.29■■□□□ 1
COL9A3-207ENST00000467819 LMO7DNF2Z398 122 aa21.28■■□□□ 1
COL9A3-207ENST00000467819 DXOO77932 396 aaKnown RBP21.28■■□□□ 1
COL9A3-207ENST00000467819 TSHRP16473 764 aa21.28■■□□□ 1
COL9A3-207ENST00000467819 CDK11BP21127 795 aaKnown RBP21.28■■□□□ 1
COL9A3-207ENST00000467819 RPIAP49247 311 aa21.28■■□□□ 1
COL9A3-207ENST00000467819 TPI1P60174 286 aa21.28■■□□□ 1
COL9A3-207ENST00000467819 PPARDQ03181 441 aa21.28■■□□□ 1
COL9A3-207ENST00000467819 TCEA2Q15560 299 aa21.28■■□□□ 1
COL9A3-207ENST00000467819 PPP1R15BQ5SWA1 713 aa21.28■■□□□ 1
COL9A3-207ENST00000467819 C6orf132Q5T0Z8 1188 aa21.28■■□□□ 1
COL9A3-207ENST00000467819 CLEC17AQ6ZS10 378 aa21.28■■□□□ 1
COL9A3-207ENST00000467819 DNAAF5Q86Y56 855 aa21.28■■□□□ 1
COL9A3-207ENST00000467819 UMODL1-AS1Q8N2C9 162 aa21.28■■□□□ 1
COL9A3-207ENST00000467819 ATXN7L3BQ96GX2 97 aa21.28■■□□□ 1
COL9A3-207ENST00000467819 ERGIC2Q96RQ1 377 aa21.28■■□□□ 1
COL9A3-207ENST00000467819 CPEB1Q9BZB8 566 aaKnown RBP21.28■■□□□ 1
COL9A3-207ENST00000467819 CLPBQ9H078 707 aa21.28■■□□□ 1
COL9A3-207ENST00000467819 SYNDIG1Q9H7V2 258 aa21.28■■□□□ 1
COL9A3-207ENST00000467819 ANO10Q9NW15 660 aa21.28■■□□□ 1
COL9A3-207ENST00000467819 CASC3O15234 703 aaKnown RBP21.27■■□□□ 1
COL9A3-207ENST00000467819 FGF10O15520 208 aaPredicted RBP21.27■■□□□ 1
COL9A3-207ENST00000467819 LZTS3O60299 673 aaPredicted RBP21.27■■□□□ 1
COL9A3-207ENST00000467819 CELA2BP08218 269 aaPredicted RBP21.27■■□□□ 1
COL9A3-207ENST00000467819 AIF1P55008 147 aa21.27■■□□□ 1
COL9A3-207ENST00000467819 ERVPABLB-1P60509 514 aa21.27■■□□□ 1
COL9A3-207ENST00000467819 OGDHQ02218 1023 aa21.27■■□□□ 1
COL9A3-207ENST00000467819 ELP6Q0PNE2 266 aa21.27■■□□□ 1
COL9A3-207ENST00000467819 LRRC14Q15048 493 aa21.27■■□□□ 1
COL9A3-207ENST00000467819 TMEM52BQ4KMG9 183 aa21.27■■□□□ 1
COL9A3-207ENST00000467819 BROXQ5VW32 411 aa21.27■■□□□ 1
COL9A3-207ENST00000467819 ACAD10Q6JQN1 1059 aa21.27■■□□□ 1
COL9A3-207ENST00000467819 RBM44Q6ZP01 1051 aaKnown RBP21.27■■□□□ 1
COL9A3-207ENST00000467819 MCOLN2Q8IZK6 566 aa21.27■■□□□ 1
COL9A3-207ENST00000467819 CELF6Q96J87 481 aaKnown RBP21.27■■□□□ 1
COL9A3-207ENST00000467819 TBATAQ96M53 351 aa21.27■■□□□ 1
COL9A3-207ENST00000467819 PCDH12Q9NPG4 1184 aa21.27■■□□□ 1
COL9A3-207ENST00000467819 ASCL3Q9NQ33 180 aa21.27■■□□□ 1
COL9A3-207ENST00000467819 THSD1Q9NS62 852 aa21.27■■□□□ 1
COL9A3-207ENST00000467819 DOLKQ9UPQ8 538 aa21.27■■□□□ 1
COL9A3-207ENST00000467819 ENTPD2Q9Y5L3 495 aa21.27■■□□□ 1
COL9A3-207ENST00000467819 TEX51A0A1B0GUA7 166 aa21.26■□□□□ 0.99
COL9A3-207ENST00000467819 A0A1W2PNU3 283 aaPredicted RBP21.26■□□□□ 0.99
COL9A3-207ENST00000467819 J3KR12 359 aa21.26■□□□□ 0.99
COL9A3-207ENST00000467819 TOR1BO14657 336 aa21.26■□□□□ 0.99
COL9A3-207ENST00000467819 RIOK3O14730 519 aaKnown RBP21.26■□□□□ 0.99
COL9A3-207ENST00000467819 YY2O15391 372 aa21.26■□□□□ 0.99
COL9A3-207ENST00000467819 C6P13671 934 aa21.26■□□□□ 0.99
COL9A3-207ENST00000467819 DESP17661 470 aa21.26■□□□□ 0.99
COL9A3-207ENST00000467819 C19orf57Q0VDD7 668 aa21.26■□□□□ 0.99
COL9A3-207ENST00000467819 STX1AQ16623 288 aa21.26■□□□□ 0.99
COL9A3-207ENST00000467819 WSCD2Q2TBF2 565 aa21.26■□□□□ 0.99
COL9A3-207ENST00000467819 CFAP58Q5T655 872 aa21.26■□□□□ 0.99
COL9A3-207ENST00000467819 HID1Q8IV36 788 aa21.26■□□□□ 0.99
COL9A3-207ENST00000467819 TPCN2Q8NHX9 752 aa21.26■□□□□ 0.99
COL9A3-207ENST00000467819 KCNE4Q8WWG9 221 aa21.26■□□□□ 0.99
COL9A3-207ENST00000467819 NAT6Q93015 286 aa21.26■□□□□ 0.99
COL9A3-207ENST00000467819 TSACCQ96A04 125 aaPredicted RBP21.26■□□□□ 0.99
COL9A3-207ENST00000467819 VCPIP1Q96JH7 1222 aa21.26■□□□□ 0.99
COL9A3-207ENST00000467819 SUV39H2Q9H5I1 410 aa21.26■□□□□ 0.99
COL9A3-207ENST00000467819 LRRC19Q9H756 370 aa21.26■□□□□ 0.99
COL9A3-207ENST00000467819 PDFQ9HBH1 243 aa21.26■□□□□ 0.99
COL9A3-207ENST00000467819 TAS2R14Q9NYV8 317 aa21.26■□□□□ 0.99
COL9A3-207ENST00000467819 AP4E1Q9UPM8 1137 aa21.26■□□□□ 0.99
COL9A3-207ENST00000467819 ATMQ13315 3056 aa21.26■□□□□ 0.99
COL9A3-207ENST00000467819 TMCO5BA8MYB1 307 aa21.25■□□□□ 0.99
COL9A3-207ENST00000467819 TK2O00142 265 aa21.25■□□□□ 0.99
COL9A3-207ENST00000467819 C1QL1O75973 258 aa21.25■□□□□ 0.99
COL9A3-207ENST00000467819 PRKCGP05129 697 aa21.25■□□□□ 0.99
COL9A3-207ENST00000467819 FERP16591 822 aa21.25■□□□□ 0.99
COL9A3-207ENST00000467819 SUOXP51687 545 aa21.25■□□□□ 0.99
COL9A3-207ENST00000467819 UGP2Q16851 508 aa21.25■□□□□ 0.99
COL9A3-207ENST00000467819 ESRP1Q6NXG1 681 aaKnown RBP21.25■□□□□ 0.99
COL9A3-207ENST00000467819 ERAP2Q6P179 960 aa21.25■□□□□ 0.99
COL9A3-207ENST00000467819 FOXR1Q6PIV2 292 aa21.25■□□□□ 0.99
COL9A3-207ENST00000467819 CCDC3Q9BQI4 270 aa21.25■□□□□ 0.99
COL9A3-207ENST00000467819 DHX35Q9H5Z1 703 aaKnown RBP21.25■□□□□ 0.99
COL9A3-207ENST00000467819 CPNE5Q9HCH3 593 aa21.25■□□□□ 0.99
COL9A3-207ENST00000467819 SIRPGQ9P1W8 387 aa21.25■□□□□ 0.99
COL9A3-207ENST00000467819 GULP1Q9UBP9 304 aa21.25■□□□□ 0.99
COL9A3-207ENST00000467819 PADI4Q9UM07 663 aa21.25■□□□□ 0.99
COL9A3-207ENST00000467819 CFAP46Q8IYW2 2715 aa21.25■□□□□ 0.99
COL9A3-207ENST00000467819 TSPAN11A1L157 253 aa21.24■□□□□ 0.99
COL9A3-207ENST00000467819 EEF2KO00418 725 aaKnown RBP21.24■□□□□ 0.99
COL9A3-207ENST00000467819 KLK10O43240 276 aa21.24■□□□□ 0.99
COL9A3-207ENST00000467819 ATMINO43313 823 aaPredicted RBP21.24■□□□□ 0.99
COL9A3-207ENST00000467819 PRAMEF11O60813 436 aa21.24■□□□□ 0.99
COL9A3-207ENST00000467819 TCEA3O75764 348 aa21.24■□□□□ 0.99
COL9A3-207ENST00000467819 PCCBP05166 539 aa21.24■□□□□ 0.99
COL9A3-207ENST00000467819 CTSEP14091 401 aa21.24■□□□□ 0.99
COL9A3-207ENST00000467819 PSMA2P25787 234 aa21.24■□□□□ 0.99
COL9A3-207ENST00000467819 RBMS1P29558 406 aaKnown RBP21.24■□□□□ 0.99
COL9A3-207ENST00000467819 BLKP51451 505 aa21.24■□□□□ 0.99
COL9A3-207ENST00000467819 HK3P52790 923 aa21.24■□□□□ 0.99
COL9A3-207ENST00000467819 NDST2P52849 883 aa21.24■□□□□ 0.99
COL9A3-207ENST00000467819 TMPRSS3P57727 454 aa21.24■□□□□ 0.99
COL9A3-207ENST00000467819 GRM3Q14832 879 aa21.24■□□□□ 0.99
COL9A3-207ENST00000467819 CA9Q16790 459 aa21.24■□□□□ 0.99
COL9A3-207ENST00000467819 ALG11Q2TAA5 492 aa21.24■□□□□ 0.99
COL9A3-207ENST00000467819 ENPP7Q6UWV6 458 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms