RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 TEX9Q8N6V9 391 aa3.97□□□□□ -1.77
VPS50-209ENST00000467326 NEUROG1Q92886 237 aa3.97□□□□□ -1.77
VPS50-209ENST00000467326 MASTLQ96GX5 879 aa3.97□□□□□ -1.77
VPS50-209ENST00000467326 PPP1R10Q96QC0 940 aaKnown RBP3.97□□□□□ -1.77
VPS50-209ENST00000467326 IWS1Q96ST2 819 aa3.97□□□□□ -1.77
VPS50-209ENST00000467326 MPHOSPH8Q99549 860 aa3.97□□□□□ -1.77
VPS50-209ENST00000467326 CHCHD6Q9BRQ6 235 aa3.97□□□□□ -1.77
VPS50-209ENST00000467326 XPO4Q9C0E2 1151 aaKnown RBP3.97□□□□□ -1.77
VPS50-209ENST00000467326 LHPPQ9H008 270 aa3.97□□□□□ -1.77
VPS50-209ENST00000467326 ITM2CQ9NQX7 267 aa3.97□□□□□ -1.77
VPS50-209ENST00000467326 TLR8Q9NR97 1041 aaKnown RBP3.97□□□□□ -1.77
VPS50-209ENST00000467326 NFKBIL1Q9UBC1 381 aaPredicted RBP3.97□□□□□ -1.77
VPS50-209ENST00000467326 HDAC6Q9UBN7 1215 aa3.97□□□□□ -1.77
VPS50-209ENST00000467326 WNT16Q9UBV4 365 aa3.97□□□□□ -1.77
VPS50-209ENST00000467326 GPR34Q9UPC5 381 aa3.97□□□□□ -1.77
VPS50-209ENST00000467326 SRPRBQ9Y5M8 271 aaKnown RBP3.97□□□□□ -1.77
VPS50-209ENST00000467326 RAI2Q9Y5P3 530 aa3.97□□□□□ -1.77
VPS50-209ENST00000467326 TARSL2A2RTX5 802 aaKnown RBP3.96□□□□□ -1.78
VPS50-209ENST00000467326 GTPBP1O00178 669 aaKnown RBP3.96□□□□□ -1.78
VPS50-209ENST00000467326 HSPB6O14558 160 aa3.96□□□□□ -1.78
VPS50-209ENST00000467326 APOA4P06727 396 aa3.96□□□□□ -1.78
VPS50-209ENST00000467326 HOXC6P09630 235 aa3.96□□□□□ -1.78
VPS50-209ENST00000467326 ENO3P13929 434 aaPredicted RBP3.96□□□□□ -1.78
VPS50-209ENST00000467326 PLA2G2AP14555 144 aa3.96□□□□□ -1.78
VPS50-209ENST00000467326 GNLYP22749 145 aa3.96□□□□□ -1.78
VPS50-209ENST00000467326 DPP6P42658 865 aa3.96□□□□□ -1.78
VPS50-209ENST00000467326 PCYT1AP49585 367 aa3.96□□□□□ -1.78
VPS50-209ENST00000467326 CRYZQ08257 329 aaKnown RBP3.96□□□□□ -1.78
VPS50-209ENST00000467326 Q0VFX4 171 aa3.96□□□□□ -1.78
VPS50-209ENST00000467326 RPE65Q16518 533 aa3.96□□□□□ -1.78
VPS50-209ENST00000467326 FSCBQ5H9T9 825 aa3.96□□□□□ -1.78
VPS50-209ENST00000467326 CBWD5Q5RIA9 395 aa3.96□□□□□ -1.78
VPS50-209ENST00000467326 DENND1BQ6P3S1 775 aa3.96□□□□□ -1.78
VPS50-209ENST00000467326 GJB7Q6PEY0 223 aa3.96□□□□□ -1.78
VPS50-209ENST00000467326 ZNF367Q7RTV3 350 aa3.96□□□□□ -1.78
VPS50-209ENST00000467326 TMC8Q8IU68 726 aa3.96□□□□□ -1.78
VPS50-209ENST00000467326 CEP57L1Q8IYX8 460 aa3.96□□□□□ -1.78
VPS50-209ENST00000467326 GHDCQ8N2G8 530 aa3.96□□□□□ -1.78
VPS50-209ENST00000467326 LSM14AQ8ND56 463 aaKnown RBP3.96□□□□□ -1.78
VPS50-209ENST00000467326 TMEM163Q8TC26 289 aa3.96□□□□□ -1.78
VPS50-209ENST00000467326 ELP5Q8TE02 316 aa3.96□□□□□ -1.78
VPS50-209ENST00000467326 WASF1Q92558 559 aa3.96□□□□□ -1.78
VPS50-209ENST00000467326 PHF21BQ96EK2 531 aa3.96□□□□□ -1.78
VPS50-209ENST00000467326 RNFT2Q96EX2 444 aa3.96□□□□□ -1.78
VPS50-209ENST00000467326 MED30Q96HR3 178 aa3.96□□□□□ -1.78
VPS50-209ENST00000467326 SPAG5Q96R06 1193 aa3.96□□□□□ -1.78
VPS50-209ENST00000467326 GFM1Q96RP9 751 aaKnown RBP3.96□□□□□ -1.78
VPS50-209ENST00000467326 ANP32EQ9BTT0 268 aa3.96□□□□□ -1.78
VPS50-209ENST00000467326 NPLQ9BXD5 320 aaPredicted RBP3.96□□□□□ -1.78
VPS50-209ENST00000467326 DIAPH3Q9NSV4 1193 aa3.96□□□□□ -1.78
VPS50-209ENST00000467326 CD207Q9UJ71 328 aa3.96□□□□□ -1.78
VPS50-209ENST00000467326 GDAQ9Y2T3 454 aa3.96□□□□□ -1.78
VPS50-209ENST00000467326 KAT6BQ8WYB5 2073 aa3.95□□□□□ -1.78
VPS50-209ENST00000467326 A0A096LPK6 155 aa3.95□□□□□ -1.78
VPS50-209ENST00000467326 CCDC196A0A1B0GTZ2 297 aa3.95□□□□□ -1.78
VPS50-209ENST00000467326 P4HA2O15460 535 aa3.95□□□□□ -1.78
VPS50-209ENST00000467326 SLC28A2O43868 658 aa3.95□□□□□ -1.78
VPS50-209ENST00000467326 ACAA1P09110 424 aaPredicted RBP3.95□□□□□ -1.78
VPS50-209ENST00000467326 ATP6V1B1P15313 513 aa3.95□□□□□ -1.78
VPS50-209ENST00000467326 HOXD3P31249 432 aaPredicted RBP3.95□□□□□ -1.78
VPS50-209ENST00000467326 THPOP40225 353 aa3.95□□□□□ -1.78
VPS50-209ENST00000467326 PTPN9P43378 593 aa3.95□□□□□ -1.78
VPS50-209ENST00000467326 GPR12P47775 334 aa3.95□□□□□ -1.78
VPS50-209ENST00000467326 PMS2P54278 862 aa3.95□□□□□ -1.78
VPS50-209ENST00000467326 DRG2P55039 364 aaKnown RBP3.95□□□□□ -1.78
VPS50-209ENST00000467326 ABATP80404 500 aa3.95□□□□□ -1.78
VPS50-209ENST00000467326 LTBQ06643 244 aa3.95□□□□□ -1.78
VPS50-209ENST00000467326 HNF4GQ14541 408 aa3.95□□□□□ -1.78
VPS50-209ENST00000467326 ME3Q16798 604 aa3.95□□□□□ -1.78
VPS50-209ENST00000467326 KLHL22Q53GT1 634 aa3.95□□□□□ -1.78
VPS50-209ENST00000467326 DNAJC21Q5F1R6 531 aaKnown RBP3.95□□□□□ -1.78
VPS50-209ENST00000467326 SH2D4BQ5SQS7 431 aa3.95□□□□□ -1.78
VPS50-209ENST00000467326 GPATCH4Q5T3I0 446 aaKnown RBP3.95□□□□□ -1.78
VPS50-209ENST00000467326 LCE1EQ5T753 118 aa3.95□□□□□ -1.78
VPS50-209ENST00000467326 NCAPH2Q6IBW4 605 aa3.95□□□□□ -1.78
VPS50-209ENST00000467326 ENOSF1Q7L5Y1 443 aa3.95□□□□□ -1.78
VPS50-209ENST00000467326 IQCA1Q86XH1 822 aa3.95□□□□□ -1.78
VPS50-209ENST00000467326 VSIG1Q86XK7 387 aa3.95□□□□□ -1.78
VPS50-209ENST00000467326 MIGA1Q8NAN2 632 aa3.95□□□□□ -1.78
VPS50-209ENST00000467326 SETD9Q8NE22 299 aa3.95□□□□□ -1.78
VPS50-209ENST00000467326 APPL2Q8NEU8 664 aa3.95□□□□□ -1.78
VPS50-209ENST00000467326 ADAMTS14Q8WXS8 1223 aa3.95□□□□□ -1.78
VPS50-209ENST00000467326 ATOH1Q92858 354 aaPredicted RBP3.95□□□□□ -1.78
VPS50-209ENST00000467326 TMEM18Q96B42 140 aa3.95□□□□□ -1.78
VPS50-209ENST00000467326 RADILQ96JH8 1075 aa3.95□□□□□ -1.78
VPS50-209ENST00000467326 MEIS3Q99687 375 aa3.95□□□□□ -1.78
VPS50-209ENST00000467326 ADPGKQ9BRR6 497 aa3.95□□□□□ -1.78
VPS50-209ENST00000467326 TTC12Q9H892 705 aaPredicted RBP3.95□□□□□ -1.78
VPS50-209ENST00000467326 NOD2Q9HC29 1040 aa3.95□□□□□ -1.78
VPS50-209ENST00000467326 WWOXQ9NZC7 414 aa3.95□□□□□ -1.78
VPS50-209ENST00000467326 EPS15L1Q9UBC2 864 aa3.95□□□□□ -1.78
VPS50-209ENST00000467326 ORC3Q9UBD5 711 aaPredicted RBP3.95□□□□□ -1.78
VPS50-209ENST00000467326 AASSQ9UDR5 926 aa3.95□□□□□ -1.78
VPS50-209ENST00000467326 SUFUQ9UMX1 484 aa3.95□□□□□ -1.78
VPS50-209ENST00000467326 LRP12Q9Y561 859 aa3.95□□□□□ -1.78
VPS50-209ENST00000467326 C4orf47A7E2U8 309 aa3.94□□□□□ -1.78
VPS50-209ENST00000467326 C19orf81C9J6K1 198 aa3.94□□□□□ -1.78
VPS50-209ENST00000467326 CHL1O00533 1208 aa3.94□□□□□ -1.78
VPS50-209ENST00000467326 PEX12O00623 359 aa3.94□□□□□ -1.78
VPS50-209ENST00000467326 ASAP2O43150 1006 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms