RNA–Protein interactions for RNA: ENST00000466392.1

EDEM3-204, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 5

Gene EDEM3, Length 491 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-204ENST00000466392 ITKQ08881 620 aa11.91□□□□□ -0.5
EDEM3-204ENST00000466392 TRAF2Q12933 501 aa11.91□□□□□ -0.5
EDEM3-204ENST00000466392 BNIP3Q12983 259 aa11.91□□□□□ -0.5
EDEM3-204ENST00000466392 IHHQ14623 411 aa11.91□□□□□ -0.5
EDEM3-204ENST00000466392 UGP2Q16851 508 aa11.91□□□□□ -0.5
EDEM3-204ENST00000466392 CFAP58Q5T655 872 aa11.91□□□□□ -0.5
EDEM3-204ENST00000466392 MARC1Q5VT66 337 aa11.91□□□□□ -0.5
EDEM3-204ENST00000466392 KIAA1161Q6NSJ0 714 aa11.91□□□□□ -0.5
EDEM3-204ENST00000466392 IL27RAQ6UWB1 636 aa11.91□□□□□ -0.5
EDEM3-204ENST00000466392 DAAM2Q86T65 1068 aa11.91□□□□□ -0.5
EDEM3-204ENST00000466392 SLC22A18ASQ8N1D0 253 aa11.91□□□□□ -0.5
EDEM3-204ENST00000466392 PAF1Q8N7H5 531 aa11.91□□□□□ -0.5
EDEM3-204ENST00000466392 MFSD2AQ8NA29 543 aa11.91□□□□□ -0.5
EDEM3-204ENST00000466392 CCNYQ8ND76 341 aa11.91□□□□□ -0.5
EDEM3-204ENST00000466392 TPCN2Q8NHX9 752 aa11.91□□□□□ -0.5
EDEM3-204ENST00000466392 SETD7Q8WTS6 366 aaKnown RBP11.91□□□□□ -0.5
EDEM3-204ENST00000466392 PDCD6IPQ8WUM4 868 aaKnown RBP11.91□□□□□ -0.5
EDEM3-204ENST00000466392 KRT35Q92764 455 aa11.91□□□□□ -0.5
EDEM3-204ENST00000466392 RAB7BQ96AH8 199 aa11.91□□□□□ -0.5
EDEM3-204ENST00000466392 BMFQ96LC9 184 aa11.91□□□□□ -0.5
EDEM3-204ENST00000466392 SMIM14Q96QK8 99 aa11.91□□□□□ -0.5
EDEM3-204ENST00000466392 TUBGCP5Q96RT8 1024 aa11.91□□□□□ -0.5
EDEM3-204ENST00000466392 LGMNQ99538 433 aa11.91□□□□□ -0.5
EDEM3-204ENST00000466392 ELF4Q99607 663 aaPredicted RBP11.91□□□□□ -0.5
EDEM3-204ENST00000466392 KLF6Q99612 283 aaPredicted RBP11.91□□□□□ -0.5
EDEM3-204ENST00000466392 MGME1Q9BQP7 344 aa11.91□□□□□ -0.5
EDEM3-204ENST00000466392 ATP13A3Q9H7F0 1226 aa11.91□□□□□ -0.5
EDEM3-204ENST00000466392 NOD2Q9HC29 1040 aa11.91□□□□□ -0.5
EDEM3-204ENST00000466392 SCUBE2Q9NQ36 999 aa11.91□□□□□ -0.5
EDEM3-204ENST00000466392 SAE1Q9UBE0 346 aaPredicted RBP11.91□□□□□ -0.5
EDEM3-204ENST00000466392 DKK3Q9UBP4 350 aa11.91□□□□□ -0.5
EDEM3-204ENST00000466392 A0A0U1RQS6 177 aa11.9□□□□□ -0.5
EDEM3-204ENST00000466392 A0A1B0GTQ1 180 aa11.9□□□□□ -0.5
EDEM3-204ENST00000466392 KCNK1O00180 336 aa11.9□□□□□ -0.5
EDEM3-204ENST00000466392 TRAFD1O14545 582 aaPredicted RBP11.9□□□□□ -0.5
EDEM3-204ENST00000466392 RIOK3O14730 519 aaKnown RBP11.9□□□□□ -0.5
EDEM3-204ENST00000466392 APOL1O14791 398 aa11.9□□□□□ -0.5
EDEM3-204ENST00000466392 TOP3BO95985 862 aaKnown RBP11.9□□□□□ -0.5
EDEM3-204ENST00000466392 HLA-DQB2P05538 268 aa11.9□□□□□ -0.5
EDEM3-204ENST00000466392 CSRP1P21291 193 aaKnown RBP11.9□□□□□ -0.5
EDEM3-204ENST00000466392 CCT8P50990 548 aa11.9□□□□□ -0.5
EDEM3-204ENST00000466392 RENBPP51606 427 aa11.9□□□□□ -0.5
EDEM3-204ENST00000466392 NAP1L1P55209 391 aaKnown RBP11.9□□□□□ -0.5
EDEM3-204ENST00000466392 AP1S1P61966 158 aa11.9□□□□□ -0.5
EDEM3-204ENST00000466392 DSC2Q02487 901 aa11.9□□□□□ -0.5
EDEM3-204ENST00000466392 ADCY2Q08462 1091 aa11.9□□□□□ -0.5
EDEM3-204ENST00000466392 NSUN2Q08J23 767 aaKnown RBP eCLIP11.9□□□□□ -0.5
EDEM3-204ENST00000466392 SLC45A4Q5BKX6 768 aa11.9□□□□□ -0.5
EDEM3-204ENST00000466392 ZNF542PQ5EBM4 170 aa11.9□□□□□ -0.5
EDEM3-204ENST00000466392 TPRG1LQ5T0D9 272 aa11.9□□□□□ -0.5
EDEM3-204ENST00000466392 LRRC38Q5VT99 294 aa11.9□□□□□ -0.5
EDEM3-204ENST00000466392 KAZNQ674X7 775 aa11.9□□□□□ -0.5
EDEM3-204ENST00000466392 SLC9A4Q6AI14 798 aa11.9□□□□□ -0.5
EDEM3-204ENST00000466392 PTAR1Q7Z6K3 402 aaPredicted RBP11.9□□□□□ -0.5
EDEM3-204ENST00000466392 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.9□□□□□ -0.5
EDEM3-204ENST00000466392 CXorf40AQ8TE69 158 aa11.9□□□□□ -0.5
EDEM3-204ENST00000466392 NSMCE1Q8WV22 266 aa11.9□□□□□ -0.5
EDEM3-204ENST00000466392 ECHDC3Q96DC8 303 aa11.9□□□□□ -0.5
EDEM3-204ENST00000466392 KLHDC7BQ96G42 594 aa11.9□□□□□ -0.5
EDEM3-204ENST00000466392 ZNF641Q96N77 438 aaPredicted RBP11.9□□□□□ -0.5
EDEM3-204ENST00000466392 NUDCD1Q96RS6 583 aa11.9□□□□□ -0.5
EDEM3-204ENST00000466392 SEMA3CQ99985 751 aa11.9□□□□□ -0.5
EDEM3-204ENST00000466392 C1QTNF2Q9BXJ5 285 aa11.9□□□□□ -0.5
EDEM3-204ENST00000466392 GDF3Q9NR23 364 aa11.9□□□□□ -0.5
EDEM3-204ENST00000466392 MBNL1Q9NR56 388 aaKnown RBP11.9□□□□□ -0.5
EDEM3-204ENST00000466392 IMPACTQ9P2X3 320 aa11.9□□□□□ -0.5
EDEM3-204ENST00000466392 PCOLCE2Q9UKZ9 415 aa11.9□□□□□ -0.5
EDEM3-204ENST00000466392 TPX2Q9ULW0 747 aaKnown RBP11.9□□□□□ -0.5
EDEM3-204ENST00000466392 NCOR2Q9Y618 2525 aa11.9□□□□□ -0.5
EDEM3-204ENST00000466392 CABIN1Q9Y6J0 2220 aa11.9□□□□□ -0.51
EDEM3-204ENST00000466392 PCNX2A6NKB5 2137 aa11.89□□□□□ -0.51
EDEM3-204ENST00000466392 A0A0A6YYK5 440 aaPredicted RBP11.89□□□□□ -0.51
EDEM3-204ENST00000466392 MATN3O15232 486 aa11.89□□□□□ -0.51
EDEM3-204ENST00000466392 PSTPIP1O43586 416 aa11.89□□□□□ -0.51
EDEM3-204ENST00000466392 TM7SF2O76062 418 aa11.89□□□□□ -0.51
EDEM3-204ENST00000466392 IPO7O95373 1038 aaKnown RBP11.89□□□□□ -0.51
EDEM3-204ENST00000466392 ADRB1P08588 477 aa11.89□□□□□ -0.51
EDEM3-204ENST00000466392 ZNF883P0CG24 379 aa11.89□□□□□ -0.51
EDEM3-204ENST00000466392 C6P13671 934 aa11.89□□□□□ -0.51
EDEM3-204ENST00000466392 CEACAM1P13688 526 aa11.89□□□□□ -0.51
EDEM3-204ENST00000466392 PECAM1P16284 738 aaPredicted RBP11.89□□□□□ -0.51
EDEM3-204ENST00000466392 SPINK2P20155 84 aa11.89□□□□□ -0.51
EDEM3-204ENST00000466392 IGFALSP35858 605 aa11.89□□□□□ -0.51
EDEM3-204ENST00000466392 NUDT1P36639 197 aa11.89□□□□□ -0.51
EDEM3-204ENST00000466392 MMP12P39900 470 aa11.89□□□□□ -0.51
EDEM3-204ENST00000466392 CDKN2BP42772 138 aa11.89□□□□□ -0.51
EDEM3-204ENST00000466392 LIG3P49916 1009 aa11.89□□□□□ -0.51
EDEM3-204ENST00000466392 VAV2P52735 878 aa11.89□□□□□ -0.51
EDEM3-204ENST00000466392 SIM1P81133 766 aaPredicted RBP11.89□□□□□ -0.51
EDEM3-204ENST00000466392 RALGDSQ12967 914 aa11.89□□□□□ -0.51
EDEM3-204ENST00000466392 ZBTB17Q13105 803 aa11.89□□□□□ -0.51
EDEM3-204ENST00000466392 SGCGQ13326 291 aa11.89□□□□□ -0.51
EDEM3-204ENST00000466392 SLC14A1Q13336 389 aa11.89□□□□□ -0.51
EDEM3-204ENST00000466392 GRM3Q14832 879 aa11.89□□□□□ -0.51
EDEM3-204ENST00000466392 IFI16Q16666 785 aaKnown RBP11.89□□□□□ -0.51
EDEM3-204ENST00000466392 TMEM52BQ4KMG9 183 aa11.89□□□□□ -0.51
EDEM3-204ENST00000466392 ODF2Q5BJF6 829 aa11.89□□□□□ -0.51
EDEM3-204ENST00000466392 C11orf63Q6NUN7 778 aa11.89□□□□□ -0.51
EDEM3-204ENST00000466392 BRAT1Q6PJG6 821 aa11.89□□□□□ -0.51
EDEM3-204ENST00000466392 SPOCD1Q6ZMY3 1216 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms