RNA–Protein interactions for RNA: ENST00000463688.6

COMMD3-205, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,407 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-205ENST00000463688 GRAMD1AQ96CP6 724 aa13.57□□□□□ -0.24
COMMD3-205ENST00000463688 CELF6Q96J87 481 aaKnown RBP13.57□□□□□ -0.24
COMMD3-205ENST00000463688 SLC13A1Q9BZW2 595 aa13.57□□□□□ -0.24
COMMD3-205ENST00000463688 BRD8Q9H0E9 1235 aa13.57□□□□□ -0.24
COMMD3-205ENST00000463688 ABHD10Q9NUJ1 306 aa13.57□□□□□ -0.24
COMMD3-205ENST00000463688 NLGN3Q9NZ94 848 aa13.57□□□□□ -0.24
COMMD3-205ENST00000463688 SPASTQ9UBP0 616 aa13.57□□□□□ -0.24
COMMD3-205ENST00000463688 LHX3Q9UBR4 397 aa13.57□□□□□ -0.24
COMMD3-205ENST00000463688 ZFR2Q9UPR6 939 aaKnown RBP13.57□□□□□ -0.24
COMMD3-205ENST00000463688 WASF3Q9UPY6 502 aa13.57□□□□□ -0.24
COMMD3-205ENST00000463688 ATP8A1Q9Y2Q0 1164 aa13.57□□□□□ -0.24
COMMD3-205ENST00000463688 EPG5Q9HCE0 2579 aa13.57□□□□□ -0.24
COMMD3-205ENST00000463688 SPTY2D1-AS1A0A0U1RR47 76 aa13.56□□□□□ -0.24
COMMD3-205ENST00000463688 KCNK3O14649 394 aa13.56□□□□□ -0.24
COMMD3-205ENST00000463688 DKK1O94907 266 aa13.56□□□□□ -0.24
COMMD3-205ENST00000463688 NME1P15531 152 aaKnown RBP13.56□□□□□ -0.24
COMMD3-205ENST00000463688 TIMP2P16035 220 aa13.56□□□□□ -0.24
COMMD3-205ENST00000463688 DAB2P98082 770 aa13.56□□□□□ -0.24
COMMD3-205ENST00000463688 KCNT1Q5JUK3 1230 aa13.56□□□□□ -0.24
COMMD3-205ENST00000463688 LRRC38Q5VT99 294 aa13.56□□□□□ -0.24
COMMD3-205ENST00000463688 SARM1Q6SZW1 724 aa13.56□□□□□ -0.24
COMMD3-205ENST00000463688 LAYNQ6UX15 382 aa13.56□□□□□ -0.24
COMMD3-205ENST00000463688 CCNI2Q6ZMN8 369 aaPredicted RBP13.56□□□□□ -0.24
COMMD3-205ENST00000463688 RAVER1Q8IY67 606 aaKnown RBP13.56□□□□□ -0.24
COMMD3-205ENST00000463688 FSTL5Q8N475 847 aaPredicted RBP13.56□□□□□ -0.24
COMMD3-205ENST00000463688 EID2Q8N6I1 236 aa13.56□□□□□ -0.24
COMMD3-205ENST00000463688 ARFGAP1Q8N6T3 406 aa13.56□□□□□ -0.24
COMMD3-205ENST00000463688 PDCD7Q8N8D1 485 aaKnown RBP13.56□□□□□ -0.24
COMMD3-205ENST00000463688 OR4C6Q8NH72 309 aa13.56□□□□□ -0.24
COMMD3-205ENST00000463688 WDR48Q8TAF3 677 aa13.56□□□□□ -0.24
COMMD3-205ENST00000463688 PEBP4Q96S96 227 aa13.56□□□□□ -0.24
COMMD3-205ENST00000463688 TRIM5Q9C035 493 aa13.56□□□□□ -0.24
COMMD3-205ENST00000463688 SCUBE2Q9NQ36 999 aa13.56□□□□□ -0.24
COMMD3-205ENST00000463688 GPATCH2LQ9NWQ4 482 aa13.56□□□□□ -0.24
COMMD3-205ENST00000463688 DNAJC28Q9NX36 388 aa13.56□□□□□ -0.24
COMMD3-205ENST00000463688 CHD8Q9HCK8 2581 aa13.56□□□□□ -0.24
COMMD3-205ENST00000463688 J3KR12 359 aa13.56□□□□□ -0.24
COMMD3-205ENST00000463688 SCAMP1O15126 338 aa13.56□□□□□ -0.24
COMMD3-205ENST00000463688 PIAS2O75928 621 aa13.56□□□□□ -0.24
COMMD3-205ENST00000463688 PYGLP06737 847 aa13.56□□□□□ -0.24
COMMD3-205ENST00000463688 GP1BAP07359 652 aa13.56□□□□□ -0.24
COMMD3-205ENST00000463688 ALPIP09923 528 aa13.56□□□□□ -0.24
COMMD3-205ENST00000463688 CYP2A6P11509 494 aaPredicted RBP13.56□□□□□ -0.24
COMMD3-205ENST00000463688 JUPP14923 745 aa13.56□□□□□ -0.24
COMMD3-205ENST00000463688 DGKAP23743 735 aa13.56□□□□□ -0.24
COMMD3-205ENST00000463688 SCNN1BP51168 640 aa13.56□□□□□ -0.24
COMMD3-205ENST00000463688 PFN3P60673 137 aa13.56□□□□□ -0.24
COMMD3-205ENST00000463688 SPA17Q15506 151 aa13.56□□□□□ -0.24
COMMD3-205ENST00000463688 SMAD1Q15797 465 aaKnown RBP13.56□□□□□ -0.24
COMMD3-205ENST00000463688 IFI16Q16666 785 aaKnown RBP13.56□□□□□ -0.24
COMMD3-205ENST00000463688 CA9Q16790 459 aa13.56□□□□□ -0.24
COMMD3-205ENST00000463688 SMTNL2Q2TAL5 461 aa13.56□□□□□ -0.24
COMMD3-205ENST00000463688 LVRNQ6Q4G3 990 aa13.56□□□□□ -0.24
COMMD3-205ENST00000463688 LEKR1Q6ZMV7 388 aa13.56□□□□□ -0.24
COMMD3-205ENST00000463688 GCNT7Q6ZNI0 430 aa13.56□□□□□ -0.24
COMMD3-205ENST00000463688 USP45Q70EL2 814 aa13.56□□□□□ -0.24
COMMD3-205ENST00000463688 SPATS2Q86XZ4 545 aaKnown RBP13.56□□□□□ -0.24
COMMD3-205ENST00000463688 CCDC170Q8IYT3 715 aa13.56□□□□□ -0.24
COMMD3-205ENST00000463688 FAM181AQ8N9Y4 354 aa13.56□□□□□ -0.24
COMMD3-205ENST00000463688 TSEN2Q8NCE0 465 aaKnown RBP13.56□□□□□ -0.24
COMMD3-205ENST00000463688 OR13H1Q8NG92 308 aa13.56□□□□□ -0.24
COMMD3-205ENST00000463688 FAM71BQ8TC56 605 aa13.56□□□□□ -0.24
COMMD3-205ENST00000463688 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.56□□□□□ -0.24
COMMD3-205ENST00000463688 KLK6Q92876 244 aa13.56□□□□□ -0.24
COMMD3-205ENST00000463688 NUDCD1Q96RS6 583 aa13.56□□□□□ -0.24
COMMD3-205ENST00000463688 PCDH18Q9HCL0 1135 aa13.56□□□□□ -0.24
COMMD3-205ENST00000463688 DDX56Q9NY93 547 aaKnown RBP13.56□□□□□ -0.24
COMMD3-205ENST00000463688 PHTF1Q9UMS5 762 aa13.56□□□□□ -0.24
COMMD3-205ENST00000463688 SLCO1B1Q9Y6L6 691 aa13.56□□□□□ -0.24
COMMD3-205ENST00000463688 DOCK4Q8N1I0 1966 aa13.55□□□□□ -0.24
COMMD3-205ENST00000463688 PSMD11O00231 422 aa13.55□□□□□ -0.24
COMMD3-205ENST00000463688 CACNB4O00305 520 aaPredicted RBP13.55□□□□□ -0.24
COMMD3-205ENST00000463688 ZW10O43264 779 aa13.55□□□□□ -0.24
COMMD3-205ENST00000463688 MFAP3LO75121 409 aa13.55□□□□□ -0.24
COMMD3-205ENST00000463688 ZNF189O75820 626 aaPredicted RBP13.55□□□□□ -0.24
COMMD3-205ENST00000463688 HOXC4P09017 264 aaPredicted RBP13.55□□□□□ -0.24
COMMD3-205ENST00000463688 ATXN1LP0C7T5 689 aaKnown RBP13.55□□□□□ -0.24
COMMD3-205ENST00000463688 ELFN1P0C7U0 828 aa13.55□□□□□ -0.24
COMMD3-205ENST00000463688 ACP1P24666 158 aa13.55□□□□□ -0.24
COMMD3-205ENST00000463688 MMP13P45452 471 aa13.55□□□□□ -0.24
COMMD3-205ENST00000463688 IL9RQ01113 521 aa13.55□□□□□ -0.24
COMMD3-205ENST00000463688 SLC25A11Q02978 314 aaKnown RBP13.55□□□□□ -0.24
COMMD3-205ENST00000463688 PDE1CQ14123 709 aaPredicted RBP13.55□□□□□ -0.24
COMMD3-205ENST00000463688 ELOCQ15369 112 aa13.55□□□□□ -0.24
COMMD3-205ENST00000463688 ZCCHC8Q6NZY4 707 aaKnown RBP13.55□□□□□ -0.24
COMMD3-205ENST00000463688 MACC1Q6ZN28 852 aa13.55□□□□□ -0.24
COMMD3-205ENST00000463688 GATAD2AQ86YP4 633 aa13.55□□□□□ -0.24
COMMD3-205ENST00000463688 ARHGAP12Q8IWW6 846 aa13.55□□□□□ -0.24
COMMD3-205ENST00000463688 OR6C4Q8NGE1 309 aa13.55□□□□□ -0.24
COMMD3-205ENST00000463688 CENPTQ96BT3 561 aa13.55□□□□□ -0.24
COMMD3-205ENST00000463688 ECHDC3Q96DC8 303 aa13.55□□□□□ -0.24
COMMD3-205ENST00000463688 IL12RB2Q99665 862 aa13.55□□□□□ -0.24
COMMD3-205ENST00000463688 MAGEB5Q9BZ81 275 aa13.55□□□□□ -0.24
COMMD3-205ENST00000463688 TRIM7Q9C029 511 aa13.55□□□□□ -0.24
COMMD3-205ENST00000463688 POLR1EQ9GZS1 481 aaKnown RBP13.55□□□□□ -0.24
COMMD3-205ENST00000463688 CCDC86Q9H6F5 360 aaKnown RBP13.55□□□□□ -0.24
COMMD3-205ENST00000463688 NHEJ1Q9H9Q4 299 aaPredicted RBP13.55□□□□□ -0.24
COMMD3-205ENST00000463688 PCDH12Q9NPG4 1184 aa13.55□□□□□ -0.24
COMMD3-205ENST00000463688 GPR27Q9NS67 375 aa13.55□□□□□ -0.24
COMMD3-205ENST00000463688 SALL4Q9UJQ4 1053 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms