RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 LBRQ14739 615 aaKnown RBP10.27□□□□□ -0.77
SF3A3-204ENST00000462258 HS1BP3Q53T59 392 aa10.27□□□□□ -0.77
SF3A3-204ENST00000462258 ERAP2Q6P179 960 aa10.27□□□□□ -0.77
SF3A3-204ENST00000462258 BRAT1Q6PJG6 821 aa10.27□□□□□ -0.77
SF3A3-204ENST00000462258 DHRS13Q6UX07 377 aa10.27□□□□□ -0.77
SF3A3-204ENST00000462258 KDM7AQ6ZMT4 941 aa10.27□□□□□ -0.77
SF3A3-204ENST00000462258 TMPRSS7Q7RTY8 843 aa10.27□□□□□ -0.77
SF3A3-204ENST00000462258 SRLQ86TD4 932 aa10.27□□□□□ -0.77
SF3A3-204ENST00000462258 DCP2Q8IU60 420 aaKnown RBP10.27□□□□□ -0.77
SF3A3-204ENST00000462258 CAMK1DQ8IU85 385 aa10.27□□□□□ -0.77
SF3A3-204ENST00000462258 GALNT15Q8N3T1 639 aa10.27□□□□□ -0.77
SF3A3-204ENST00000462258 KDF1Q8NAX2 398 aaPredicted RBP10.27□□□□□ -0.77
SF3A3-204ENST00000462258 OR8K1Q8NGG5 319 aa10.27□□□□□ -0.77
SF3A3-204ENST00000462258 HCAR2Q8TDS4 363 aa10.27□□□□□ -0.77
SF3A3-204ENST00000462258 TSC1Q92574 1164 aa10.27□□□□□ -0.77
SF3A3-204ENST00000462258 IFT43Q96FT9 208 aa10.27□□□□□ -0.77
SF3A3-204ENST00000462258 ZNF641Q96N77 438 aaPredicted RBP10.27□□□□□ -0.77
SF3A3-204ENST00000462258 ZNF599Q96NL3 588 aa10.27□□□□□ -0.77
SF3A3-204ENST00000462258 PACSIN1Q9BY11 444 aa10.27□□□□□ -0.77
SF3A3-204ENST00000462258 SUV39H2Q9H5I1 410 aa10.27□□□□□ -0.77
SF3A3-204ENST00000462258 PCDH12Q9NPG4 1184 aa10.27□□□□□ -0.77
SF3A3-204ENST00000462258 ZNHIT6Q9NWK9 470 aaKnown RBP10.27□□□□□ -0.77
SF3A3-204ENST00000462258 UCKL1Q9NWZ5 548 aa10.27□□□□□ -0.77
SF3A3-204ENST00000462258 RCOR3Q9P2K3 495 aaPredicted RBP10.27□□□□□ -0.77
SF3A3-204ENST00000462258 UVRAGQ9P2Y5 699 aa10.27□□□□□ -0.77
SF3A3-204ENST00000462258 SEPT3Q9UH03 358 aa10.27□□□□□ -0.77
SF3A3-204ENST00000462258 ZMIZ1Q9ULJ6 1067 aa10.27□□□□□ -0.77
SF3A3-204ENST00000462258 ATP8A1Q9Y2Q0 1164 aa10.27□□□□□ -0.77
SF3A3-204ENST00000462258 PCDHGA1Q9Y5H4 931 aa10.27□□□□□ -0.77
SF3A3-204ENST00000462258 SPTY2D1-AS1A0A0U1RR47 76 aa10.26□□□□□ -0.77
SF3A3-204ENST00000462258 SSU72P8A0A1W2PR75 194 aa10.26□□□□□ -0.77
SF3A3-204ENST00000462258 H3BM21 787 aa10.26□□□□□ -0.77
SF3A3-204ENST00000462258 MUSKO15146 869 aa10.26□□□□□ -0.77
SF3A3-204ENST00000462258 FFAR2O15552 330 aa10.26□□□□□ -0.77
SF3A3-204ENST00000462258 MFSD11O43934 449 aa10.26□□□□□ -0.77
SF3A3-204ENST00000462258 AKR1B10O60218 316 aa10.26□□□□□ -0.77
SF3A3-204ENST00000462258 PROSCO94903 275 aa10.26□□□□□ -0.77
SF3A3-204ENST00000462258 CD48P09326 243 aa10.26□□□□□ -0.77
SF3A3-204ENST00000462258 H2AFZP0C0S5 128 aa10.26□□□□□ -0.77
SF3A3-204ENST00000462258 ALPPL2P10696 532 aa10.26□□□□□ -0.77
SF3A3-204ENST00000462258 C6P13671 934 aa10.26□□□□□ -0.77
SF3A3-204ENST00000462258 NME1P15531 152 aaKnown RBP10.26□□□□□ -0.77
SF3A3-204ENST00000462258 DGKAP23743 735 aa10.26□□□□□ -0.77
SF3A3-204ENST00000462258 CSNK1DP48730 415 aa10.26□□□□□ -0.77
SF3A3-204ENST00000462258 PFN3P60673 137 aa10.26□□□□□ -0.77
SF3A3-204ENST00000462258 AP1S1P61966 158 aa10.26□□□□□ -0.77
SF3A3-204ENST00000462258 HNRNPKP61978 463 aaKnown RBP eCLIP10.26□□□□□ -0.77
SF3A3-204ENST00000462258 BCL2L1Q07817 233 aa10.26□□□□□ -0.77
SF3A3-204ENST00000462258 SLC10A7Q0GE19 358 aa10.26□□□□□ -0.77
SF3A3-204ENST00000462258 FZD2Q14332 565 aa10.26□□□□□ -0.77
SF3A3-204ENST00000462258 IRF4Q15306 451 aa10.26□□□□□ -0.77
SF3A3-204ENST00000462258 SMAD1Q15797 465 aaKnown RBP10.26□□□□□ -0.77
SF3A3-204ENST00000462258 HADHQ16836 314 aaKnown RBP10.26□□□□□ -0.77
SF3A3-204ENST00000462258 UGP2Q16851 508 aa10.26□□□□□ -0.77
SF3A3-204ENST00000462258 ASTE1Q2TB18 679 aaPredicted RBP10.26□□□□□ -0.77
SF3A3-204ENST00000462258 PROX2Q3B8N5 592 aa10.26□□□□□ -0.77
SF3A3-204ENST00000462258 TMEM52BQ4KMG9 183 aa10.26□□□□□ -0.77
SF3A3-204ENST00000462258 ZNF542PQ5EBM4 170 aa10.26□□□□□ -0.77
SF3A3-204ENST00000462258 TPRG1LQ5T0D9 272 aa10.26□□□□□ -0.77
SF3A3-204ENST00000462258 CCNI2Q6ZMN8 369 aaPredicted RBP10.26□□□□□ -0.77
SF3A3-204ENST00000462258 H2AFVQ71UI9 128 aa10.26□□□□□ -0.77
SF3A3-204ENST00000462258 ZSWIM9Q86XI8 627 aa10.26□□□□□ -0.77
SF3A3-204ENST00000462258 CPNE8Q86YQ8 564 aa10.26□□□□□ -0.77
SF3A3-204ENST00000462258 SLC25A45Q8N413 288 aa10.26□□□□□ -0.77
SF3A3-204ENST00000462258 PAF1Q8N7H5 531 aa10.26□□□□□ -0.77
SF3A3-204ENST00000462258 TP53I13Q8NBR0 393 aaPredicted RBP10.26□□□□□ -0.77
SF3A3-204ENST00000462258 ZNF548Q8NEK5 533 aaPredicted RBP10.26□□□□□ -0.77
SF3A3-204ENST00000462258 OR4C6Q8NH72 309 aa10.26□□□□□ -0.77
SF3A3-204ENST00000462258 FAM71BQ8TC56 605 aa10.26□□□□□ -0.77
SF3A3-204ENST00000462258 PSKH2Q96QS6 385 aa10.26□□□□□ -0.77
SF3A3-204ENST00000462258 ZNF670Q9BS34 389 aa10.26□□□□□ -0.77
SF3A3-204ENST00000462258 CAAP1Q9H8G2 361 aa10.26□□□□□ -0.77
SF3A3-204ENST00000462258 LCMT1Q9UIC8 334 aa10.26□□□□□ -0.77
SF3A3-204ENST00000462258 COQ6Q9Y2Z9 468 aa10.26□□□□□ -0.77
SF3A3-204ENST00000462258 MYLKQ15746 1914 aa10.25□□□□□ -0.77
SF3A3-204ENST00000462258 FAM149AA5PLN7 773 aa10.25□□□□□ -0.77
SF3A3-204ENST00000462258 TRIM38O00635 465 aa10.25□□□□□ -0.77
SF3A3-204ENST00000462258 RIOK3O14730 519 aaKnown RBP10.25□□□□□ -0.77
SF3A3-204ENST00000462258 SIGLEC6O43699 453 aa10.25□□□□□ -0.77
SF3A3-204ENST00000462258 BUB1BO60566 1050 aaPredicted RBP10.25□□□□□ -0.77
SF3A3-204ENST00000462258 MAFKO60675 156 aa10.25□□□□□ -0.77
SF3A3-204ENST00000462258 PEX11BO96011 259 aa10.25□□□□□ -0.77
SF3A3-204ENST00000462258 CSF2P04141 144 aa10.25□□□□□ -0.77
SF3A3-204ENST00000462258 PRKCGP05129 697 aa10.25□□□□□ -0.77
SF3A3-204ENST00000462258 C1SP09871 688 aa10.25□□□□□ -0.77
SF3A3-204ENST00000462258 TMEM253P0C7T8 217 aa10.25□□□□□ -0.77
SF3A3-204ENST00000462258 CKMT2P17540 419 aa10.25□□□□□ -0.77
SF3A3-204ENST00000462258 MAN1A1P33908 653 aa10.25□□□□□ -0.77
SF3A3-204ENST00000462258 HSPA9P38646 679 aaKnown RBP10.25□□□□□ -0.77
SF3A3-204ENST00000462258 SCNN1BP51168 640 aa10.25□□□□□ -0.77
SF3A3-204ENST00000462258 RENBPP51606 427 aa10.25□□□□□ -0.77
SF3A3-204ENST00000462258 THOP1P52888 689 aa10.25□□□□□ -0.77
SF3A3-204ENST00000462258 DAB2P98082 770 aa10.25□□□□□ -0.77
SF3A3-204ENST00000462258 NSUN2Q08J23 767 aaKnown RBP eCLIP10.25□□□□□ -0.77
SF3A3-204ENST00000462258 MMRN1Q13201 1228 aa10.25□□□□□ -0.77
SF3A3-204ENST00000462258 ZNF211Q13398 564 aaPredicted RBP10.25□□□□□ -0.77
SF3A3-204ENST00000462258 DPYSL3Q14195 570 aa10.25□□□□□ -0.77
SF3A3-204ENST00000462258 TSR1Q2NL82 804 aaKnown RBP10.25□□□□□ -0.77
SF3A3-204ENST00000462258 NCBP2-AS2Q69YL0 99 aa10.25□□□□□ -0.77
SF3A3-204ENST00000462258 MACC1Q6ZN28 852 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms