RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 EPOP01588 193 aa9.04□□□□□ -0.96
VPS50-207ENST00000458530 FGF1P05230 155 aa9.04□□□□□ -0.96
VPS50-207ENST00000458530 CEBPBP17676 345 aa9.04□□□□□ -0.96
VPS50-207ENST00000458530 KRT15P19012 456 aa9.04□□□□□ -0.96
VPS50-207ENST00000458530 FSHRP23945 695 aa9.04□□□□□ -0.96
VPS50-207ENST00000458530 PRKCHP24723 683 aa9.04□□□□□ -0.96
VPS50-207ENST00000458530 HPDP32754 393 aaPredicted RBP9.04□□□□□ -0.96
VPS50-207ENST00000458530 CD86P42081 329 aa9.04□□□□□ -0.96
VPS50-207ENST00000458530 SGSHP51688 502 aa9.04□□□□□ -0.96
VPS50-207ENST00000458530 WNT3AP56704 352 aa9.04□□□□□ -0.96
VPS50-207ENST00000458530 MAGOHP61326 146 aaKnown RBP9.04□□□□□ -0.96
VPS50-207ENST00000458530 SKOR1P84550 965 aa9.04□□□□□ -0.96
VPS50-207ENST00000458530 SULT2A1Q06520 285 aa9.04□□□□□ -0.96
VPS50-207ENST00000458530 SLC20A2Q08357 652 aa9.04□□□□□ -0.96
VPS50-207ENST00000458530 SLC10A7Q0GE19 358 aa9.04□□□□□ -0.96
VPS50-207ENST00000458530 CRYMQ14894 314 aa9.04□□□□□ -0.96
VPS50-207ENST00000458530 ZNF77Q15935 545 aa9.04□□□□□ -0.96
VPS50-207ENST00000458530 SLC5A9Q2M3M2 681 aa9.04□□□□□ -0.96
VPS50-207ENST00000458530 PCID2Q5JVF3 399 aa9.04□□□□□ -0.96
VPS50-207ENST00000458530 RARS2Q5T160 578 aaKnown RBP9.04□□□□□ -0.96
VPS50-207ENST00000458530 STXBP5Q5T5C0 1151 aa9.04□□□□□ -0.96
VPS50-207ENST00000458530 FYB2Q5VWT5 728 aa9.04□□□□□ -0.96
VPS50-207ENST00000458530 RNF43Q68DV7 783 aa9.04□□□□□ -0.96
VPS50-207ENST00000458530 UNC5AQ6ZN44 842 aa9.04□□□□□ -0.96
VPS50-207ENST00000458530 NLRP9Q7RTR0 991 aa9.04□□□□□ -0.96
VPS50-207ENST00000458530 SLC26A11Q86WA9 606 aa9.04□□□□□ -0.96
VPS50-207ENST00000458530 LRRC6Q86X45 466 aa9.04□□□□□ -0.96
VPS50-207ENST00000458530 CTAGE3PQ8IX95 158 aa9.04□□□□□ -0.96
VPS50-207ENST00000458530 MAML2Q8IZL2 1156 aaPredicted RBP9.04□□□□□ -0.96
VPS50-207ENST00000458530 SIX5Q8N196 739 aa9.04□□□□□ -0.96
VPS50-207ENST00000458530 C12orf76Q8N812 135 aaPredicted RBP9.04□□□□□ -0.96
VPS50-207ENST00000458530 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.04□□□□□ -0.96
VPS50-207ENST00000458530 E2F7Q96AV8 911 aa9.04□□□□□ -0.96
VPS50-207ENST00000458530 MTBPQ96DY7 904 aa9.04□□□□□ -0.96
VPS50-207ENST00000458530 MYEOVQ96EZ4 313 aa9.04□□□□□ -0.96
VPS50-207ENST00000458530 OXNAD1Q96HP4 312 aaPredicted RBP9.04□□□□□ -0.96
VPS50-207ENST00000458530 PAFAH2Q99487 392 aa9.04□□□□□ -0.96
VPS50-207ENST00000458530 GORASP1Q9BQQ3 440 aa9.04□□□□□ -0.96
VPS50-207ENST00000458530 FEM1AQ9BSK4 669 aa9.04□□□□□ -0.96
VPS50-207ENST00000458530 SLC2A11Q9BYW1 496 aa9.04□□□□□ -0.96
VPS50-207ENST00000458530 ARNT2Q9HBZ2 717 aa9.04□□□□□ -0.96
VPS50-207ENST00000458530 SYBUQ9NX95 663 aa9.04□□□□□ -0.96
VPS50-207ENST00000458530 OBP2AQ9NY56 170 aa9.04□□□□□ -0.96
VPS50-207ENST00000458530 GDE1Q9NZC3 331 aa9.04□□□□□ -0.96
VPS50-207ENST00000458530 ZNF180Q9UJW8 692 aa9.04□□□□□ -0.96
VPS50-207ENST00000458530 SOX13Q9UN79 622 aa9.04□□□□□ -0.96
VPS50-207ENST00000458530 KIAA1549LQ6ZVL6 1849 aa9.03□□□□□ -0.96
VPS50-207ENST00000458530 FAM208BQ5VWN6 2430 aa9.03□□□□□ -0.96
VPS50-207ENST00000458530 A0A0D9SEW6 157 aa9.03□□□□□ -0.96
VPS50-207ENST00000458530 ALDH1A2O94788 518 aa9.03□□□□□ -0.96
VPS50-207ENST00000458530 MT-CYBP00156 380 aaPredicted RBP9.03□□□□□ -0.96
VPS50-207ENST00000458530 ADH1CP00326 375 aa9.03□□□□□ -0.96
VPS50-207ENST00000458530 SP9P0CG40 484 aa9.03□□□□□ -0.96
VPS50-207ENST00000458530 ADRA1DP25100 572 aa9.03□□□□□ -0.96
VPS50-207ENST00000458530 ADRA1AP35348 466 aa9.03□□□□□ -0.96
VPS50-207ENST00000458530 CSKP41240 450 aa9.03□□□□□ -0.96
VPS50-207ENST00000458530 SERPINH1P50454 418 aaKnown RBP9.03□□□□□ -0.96
VPS50-207ENST00000458530 PLK1P53350 603 aa9.03□□□□□ -0.96
VPS50-207ENST00000458530 AP1S1P61966 158 aa9.03□□□□□ -0.96
VPS50-207ENST00000458530 DSC2Q02487 901 aa9.03□□□□□ -0.96
VPS50-207ENST00000458530 NSUN2Q08J23 767 aaKnown RBP eCLIP9.03□□□□□ -0.96
VPS50-207ENST00000458530 MGAT5Q09328 741 aa9.03□□□□□ -0.96
VPS50-207ENST00000458530 SPARCL1Q14515 664 aa9.03□□□□□ -0.96
VPS50-207ENST00000458530 PCSK7Q16549 785 aa9.03□□□□□ -0.96
VPS50-207ENST00000458530 SKIDA1Q1XH10 827 aa9.03□□□□□ -0.96
VPS50-207ENST00000458530 KBTBD12Q3ZCT8 623 aa9.03□□□□□ -0.96
VPS50-207ENST00000458530 EMC10Q5UCC4 262 aa9.03□□□□□ -0.96
VPS50-207ENST00000458530 PDPK2PQ6A1A2 396 aa9.03□□□□□ -0.96
VPS50-207ENST00000458530 KDELC1Q6UW63 502 aa9.03□□□□□ -0.96
VPS50-207ENST00000458530 TPGS1Q6ZTW0 290 aa9.03□□□□□ -0.96
VPS50-207ENST00000458530 MARK2Q7KZI7 788 aaKnown RBP9.03□□□□□ -0.96
VPS50-207ENST00000458530 RASSF3Q86WH2 238 aa9.03□□□□□ -0.96
VPS50-207ENST00000458530 ARID3BQ8IVW6 561 aaPredicted RBP9.03□□□□□ -0.96
VPS50-207ENST00000458530 SH2D3CQ8N5H7 860 aa9.03□□□□□ -0.96
VPS50-207ENST00000458530 SPATA22Q8NHS9 363 aa9.03□□□□□ -0.96
VPS50-207ENST00000458530 SLC44A1Q8WWI5 657 aa9.03□□□□□ -0.96
VPS50-207ENST00000458530 ING5Q8WYH8 240 aa9.03□□□□□ -0.96
VPS50-207ENST00000458530 WBP2Q969T9 261 aa9.03□□□□□ -0.96
VPS50-207ENST00000458530 ZNF669Q96BR6 464 aaPredicted RBP9.03□□□□□ -0.96
VPS50-207ENST00000458530 ALKBH8Q96BT7 664 aaKnown RBP9.03□□□□□ -0.96
VPS50-207ENST00000458530 MRGPRX2Q96LB1 330 aa9.03□□□□□ -0.96
VPS50-207ENST00000458530 NUDCD1Q96RS6 583 aa9.03□□□□□ -0.96
VPS50-207ENST00000458530 RANBP9Q96S59 729 aa9.03□□□□□ -0.96
VPS50-207ENST00000458530 SMC6Q96SB8 1091 aa9.03□□□□□ -0.96
VPS50-207ENST00000458530 SEMA3CQ99985 751 aa9.03□□□□□ -0.96
VPS50-207ENST00000458530 WDR83Q9BRX9 315 aaKnown RBP9.03□□□□□ -0.96
VPS50-207ENST00000458530 BBS2Q9BXC9 721 aa9.03□□□□□ -0.96
VPS50-207ENST00000458530 ADGRE3Q9BY15 652 aa9.03□□□□□ -0.96
VPS50-207ENST00000458530 SPHK2Q9NRA0 654 aa9.03□□□□□ -0.96
VPS50-207ENST00000458530 THG1LQ9NWX6 298 aaKnown RBP9.03□□□□□ -0.96
VPS50-207ENST00000458530 PSD3Q9NYI0 1048 aa9.03□□□□□ -0.96
VPS50-207ENST00000458530 UBP1Q9NZI7 540 aa9.03□□□□□ -0.96
VPS50-207ENST00000458530 MARK1Q9P0L2 795 aa9.03□□□□□ -0.96
VPS50-207ENST00000458530 VPS51Q9UID3 782 aa9.03□□□□□ -0.96
VPS50-207ENST00000458530 SLC25A13Q9UJS0 675 aa9.03□□□□□ -0.96
VPS50-207ENST00000458530 ADAM21Q9UKJ8 722 aa9.03□□□□□ -0.96
VPS50-207ENST00000458530 SMG5Q9UPR3 1016 aaKnown RBP9.03□□□□□ -0.96
VPS50-207ENST00000458530 RPS6KL1Q9Y6S9 549 aa9.03□□□□□ -0.96
VPS50-207ENST00000458530 FAM169AQ9Y6X4 670 aa9.03□□□□□ -0.96
VPS50-207ENST00000458530 DOCK8Q8NF50 2099 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms