RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 GOLGA8QA0A0J9YX86 632 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 TTC26A0AVF1 554 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 SYCE3A1L190 88 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 PTPDC1A2A3K4 754 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 GOLGA8OA6NCC3 632 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 FAM47DPA6NHR8 397 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 NPIPB8E9PQR5 432 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 GOLGA8NF8WBI6 632 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 ACOT7O00154 380 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 ACKR2O00590 384 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 PPEF2O14830 753 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 ZNF263O14978 683 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 GCNT3O95395 438 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 MLYCDO95822 493 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 GNA14O95837 355 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 STAG3L3P0CL85 134 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 PRPS2P11908 318 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 CHN1P15882 459 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 GJA1P17302 382 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 CTRB1P17538 263 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 PRKACAP17612 351 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 CHRM3P20309 590 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 COMTP21964 271 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 NMT1P30419 496 aaKnown RBP5.51□□□□□ -1.53
VPS41-209ENST00000457055 ALDH3A1P30838 453 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 IGFALSP35858 605 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 ARL3P36405 182 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 ME1P48163 572 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 HSPA7P48741 367 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 POU3F4P49335 361 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 SERPINB8P50452 374 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 ATXN3P54252 364 aaPredicted RBP5.51□□□□□ -1.53
VPS41-209ENST00000457055 MFAP3P55082 362 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 HUNKP57058 714 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 SUMO1P63165 101 aaKnown RBP5.51□□□□□ -1.53
VPS41-209ENST00000457055 DDR1Q08345 913 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 FSTL1Q12841 308 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 MAP3K12Q12852 859 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 UBE3CQ15386 1083 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 SLC15A2Q16348 729 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 NRN1LQ496H8 165 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 CRB2Q5IJ48 1285 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 GLRA4Q5JXX5 417 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 ATXN7L2Q5T6C5 722 aaPredicted RBP5.51□□□□□ -1.53
VPS41-209ENST00000457055 PTRHD1Q6GMV3 140 aaKnown RBP5.51□□□□□ -1.53
VPS41-209ENST00000457055 CTRB2Q6GPI1 263 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 ZNF852Q6ZMS4 543 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 TRIM72Q6ZMU5 477 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 RNF207Q6ZRF8 634 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 SZRD1Q7Z422 152 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 GLRX5Q86SX6 157 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 TPRA1Q86W33 373 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 DENND1CQ8IV53 801 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 APLFQ8IW19 511 aaPredicted RBP5.51□□□□□ -1.53
VPS41-209ENST00000457055 MIER2Q8N344 545 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 IGSF22Q8N9C0 903 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 FANCBQ8NB91 859 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 SLC24A4Q8NFF2 622 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 CFAP61Q8NHU2 1237 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 GPT2Q8TD30 523 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 HASPINQ8TF76 798 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 PRCCQ92733 491 aaPredicted RBP5.51□□□□□ -1.53
VPS41-209ENST00000457055 THRSPQ92748 146 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 EXT2Q93063 718 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 PHKBQ93100 1093 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 GFM2Q969S9 779 aaKnown RBP5.51□□□□□ -1.53
VPS41-209ENST00000457055 FAM162AQ96A26 154 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 FAM120BQ96EK7 910 aaKnown RBP5.51□□□□□ -1.53
VPS41-209ENST00000457055 TEKT5Q96M29 485 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 ZNF560Q96MR9 790 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 PRRX2Q99811 253 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 C19orf43Q9BQ61 176 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 STRA6Q9BX79 667 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 NDST4Q9H3R1 872 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 MVB12BQ9H7P6 319 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 FBRSL1Q9HCM7 1045 aaKnown RBP5.51□□□□□ -1.53
VPS41-209ENST00000457055 NRIP3Q9NQ35 241 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 MRPL40Q9NQ50 206 aaKnown RBP5.51□□□□□ -1.53
VPS41-209ENST00000457055 AGPAT5Q9NUQ2 364 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 C14orf119Q9NWQ9 140 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 TAB2Q9NYJ8 693 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 STX18Q9P2W9 335 aaKnown RBP5.51□□□□□ -1.53
VPS41-209ENST00000457055 IPO11Q9UI26 975 aaKnown RBP5.51□□□□□ -1.53
VPS41-209ENST00000457055 CYTH4Q9UIA0 394 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 ITGA11Q9UKX5 1188 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 STON1Q9Y6Q2 735 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 RPAP1Q9BWH6 1393 aaPredicted RBP5.51□□□□□ -1.53
VPS41-209ENST00000457055 KIF15Q9NS87 1388 aa5.51□□□□□ -1.53
VPS41-209ENST00000457055 SPATA31A1Q5TZJ5 1347 aa5.5□□□□□ -1.53
VPS41-209ENST00000457055 COL14A1Q05707 1796 aaKnown RBP5.5□□□□□ -1.53
VPS41-209ENST00000457055 LMTK2Q8IWU2 1503 aa5.5□□□□□ -1.53
VPS41-209ENST00000457055 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.5□□□□□ -1.53
VPS41-209ENST00000457055 SERTM2A0A1B0GWG4 89 aa5.5□□□□□ -1.53
VPS41-209ENST00000457055 A0A1W2PRV1 198 aa5.5□□□□□ -1.53
VPS41-209ENST00000457055 DENND3A2RUS2 1198 aa5.5□□□□□ -1.53
VPS41-209ENST00000457055 HTR3EA5X5Y0 456 aa5.5□□□□□ -1.53
VPS41-209ENST00000457055 A8MXE2 369 aa5.5□□□□□ -1.53
VPS41-209ENST00000457055 H3BML4 177 aa5.5□□□□□ -1.53
VPS41-209ENST00000457055 CXCL11O14625 94 aa5.5□□□□□ -1.53
VPS41-209ENST00000457055 DVL2O14641 736 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms