RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 TTC1Q99614 292 aa6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 C17orf80Q9BSJ5 609 aa6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 SPON2Q9BUD6 331 aa6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 CDH19Q9H159 772 aa6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 ALG13Q9NP73 1137 aaKnown RBP6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 PPANQ9NQ55 473 aaKnown RBP6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 SMYD2Q9NRG4 433 aa6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 MRGBPQ9NV56 204 aa6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 LHX3Q9UBR4 397 aa6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 SLC25A13Q9UJS0 675 aa6.89□□□□□ -1.31
ECHDC1-210ENST00000454859 TMEM265A0A087WTH1 108 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 A0A0D9SEW6 157 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 LCHNA4D1U4 455 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 RGSL1A5PLK6 1076 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 F8W8V4 182 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 CBX4O00257 560 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 NPC1O15118 1278 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 CCL16O15467 120 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 LDB2O43679 373 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 ATP9BO43861 1147 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 FZD6O60353 706 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 MT-CYBP00156 380 aaPredicted RBP6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 IRF1P10914 325 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 PYGBP11216 843 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 LPOP22079 712 aaPredicted RBP6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 TYK2P29597 1187 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 RPA3P35244 121 aaPredicted RBP6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 CD151P48509 253 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 WDR4P57081 412 aaKnown RBP6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 RHOAP61586 193 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 POLR2LP62875 67 aaKnown RBP6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 DSC2Q02487 901 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 CCDC15Q0P6D6 951 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 EIF4HQ15056 248 aaKnown RBP6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 TYSND1Q2T9J0 566 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 AFTPHQ6ULP2 937 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 ZC3HC1Q86WB0 502 aaKnown RBP6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 HS6ST3Q8IZP7 471 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 CFAP52Q8N1V2 620 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 CARNMT1Q8N4J0 409 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 CCDC33Q8N5R6 958 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 CCDC197Q8NCU1 140 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 OR7D4Q8NG98 312 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 TCP10LQ8TDR4 215 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 PTPRN2Q92932 1015 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 ZNF707Q96C28 371 aaPredicted RBP6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 MRPL38Q96DV4 380 aaKnown RBP6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 ZNF419Q96HQ0 510 aaPredicted RBP6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 C7orf26Q96N11 449 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 OSBPL1AQ9BXW6 950 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 CEP41Q9BYV8 373 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 ATP13A3Q9H7F0 1226 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 TLE6Q9H808 572 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 SPHK2Q9NRA0 654 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 CHRAC1Q9NRG0 131 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 THG1LQ9NWX6 298 aaKnown RBP6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 SIRPGQ9P1W8 387 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 KLHL42Q9P2K6 505 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 VPS51Q9UID3 782 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 TLK1Q9UKI8 766 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 KIAA1549LQ6ZVL6 1849 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 A0A1W2PPM1 405 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 ANKRD66B4E2M5 251 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 NFATC1O95644 943 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 POP4O95707 220 aaKnown RBP6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 TAC1P20366 129 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 NMBRP28336 390 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 SERPINA4P29622 427 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 NNMTP40261 264 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 EIF2DP41214 584 aaKnown RBP6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 PRAMEP78395 509 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 CYP4F8P98187 520 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 EFTUD2Q15029 972 aaKnown RBP eCLIP6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 TEAD2Q15562 447 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 ZKSCAN8Q15776 578 aaPredicted RBP6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 ARMC12Q5T9G4 340 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 FAM45BPQ6NSW5 357 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 LVRNQ6Q4G3 990 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 CAPN12Q6ZSI9 719 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 CLEC14AQ86T13 490 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 BBS7Q8IWZ6 715 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 SUGP1Q8IWZ8 645 aaKnown RBP6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 MDM1Q8TC05 714 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 FAM45AQ8TCE6 357 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 OSCP1Q8WVF1 389 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 MFSD3Q96ES6 412 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 SERAC1Q96JX3 654 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 SLC22A12Q96S37 553 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 CYP2S1Q96SQ9 504 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 TUBB6Q9BUF5 446 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 NFKBIL1Q9UBC1 381 aaPredicted RBP6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 FBXO5Q9UKT4 447 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 PHTF1Q9UMS5 762 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 ARL2BPQ9Y2Y0 163 aa6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 MRPS23Q9Y3D9 190 aaKnown RBP6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 USP15Q9Y4E8 981 aaPredicted RBP6.88□□□□□ -1.31
ECHDC1-210ENST00000454859 CCDC195A0A1B0GUA6 201 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 HMX2A2RU54 273 aa6.87□□□□□ -1.31
ECHDC1-210ENST00000454859 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms