RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 LCA5LO95447 670 aa25.09■■□□□ 1.61
MSH2-203ENST00000454849 SERPINA4P29622 427 aa25.09■■□□□ 1.61
MSH2-203ENST00000454849 MMP13P45452 471 aa25.09■■□□□ 1.61
MSH2-203ENST00000454849 RENBPP51606 427 aa25.09■■□□□ 1.61
MSH2-203ENST00000454849 NSUN2Q08J23 767 aaKnown RBP eCLIP25.09■■□□□ 1.61
MSH2-203ENST00000454849 GALNT2Q10471 571 aa25.09■■□□□ 1.61
MSH2-203ENST00000454849 SUZ12Q15022 739 aaKnown RBP25.09■■□□□ 1.61
MSH2-203ENST00000454849 ZNF542PQ5EBM4 170 aa25.09■■□□□ 1.61
MSH2-203ENST00000454849 MARC1Q5VT66 337 aa25.09■■□□□ 1.61
MSH2-203ENST00000454849 RAD9BQ6WBX8 426 aa25.09■■□□□ 1.61
MSH2-203ENST00000454849 IQCHQ86VS3 1027 aa25.09■■□□□ 1.61
MSH2-203ENST00000454849 PNPLA1Q8N8W4 532 aa25.09■■□□□ 1.61
MSH2-203ENST00000454849 NSMCE1Q8WV22 266 aa25.09■■□□□ 1.61
MSH2-203ENST00000454849 FAF2Q96CS3 445 aa25.09■■□□□ 1.61
MSH2-203ENST00000454849 RNF157Q96PX1 679 aa25.09■■□□□ 1.61
MSH2-203ENST00000454849 TUBGCP5Q96RT8 1024 aa25.09■■□□□ 1.61
MSH2-203ENST00000454849 KLF6Q99612 283 aaPredicted RBP25.09■■□□□ 1.61
MSH2-203ENST00000454849 SCUBE2Q9NQ36 999 aa25.09■■□□□ 1.61
MSH2-203ENST00000454849 PCDHGB2Q9Y5G2 931 aa25.09■■□□□ 1.61
MSH2-203ENST00000454849 EPN1Q9Y6I3 576 aaPredicted RBP25.09■■□□□ 1.61
MSH2-203ENST00000454849 TP53BP1Q12888 1972 aaPredicted RBP25.09■■□□□ 1.61
MSH2-203ENST00000454849 GARSP41250 739 aaKnown RBP25.08■■□□□ 1.61
MSH2-203ENST00000454849 ITKQ08881 620 aa25.08■■□□□ 1.61
MSH2-203ENST00000454849 GRM3Q14832 879 aa25.08■■□□□ 1.61
MSH2-203ENST00000454849 DBX2Q6ZNG2 339 aa25.08■■□□□ 1.61
MSH2-203ENST00000454849 B4GALNT4Q76KP1 1039 aa25.08■■□□□ 1.61
MSH2-203ENST00000454849 PDCD6IPQ8WUM4 868 aaKnown RBP25.08■■□□□ 1.61
MSH2-203ENST00000454849 TSPAN11A1L157 253 aa25.07■■□□□ 1.6
MSH2-203ENST00000454849 FLRT2O43155 660 aa25.07■■□□□ 1.6
MSH2-203ENST00000454849 DFNA5O60443 496 aa25.07■■□□□ 1.6
MSH2-203ENST00000454849 NDUFA10O95299 355 aa25.07■■□□□ 1.6
MSH2-203ENST00000454849 ITGAVP06756 1048 aa25.07■■□□□ 1.6
MSH2-203ENST00000454849 PMLP29590 882 aa25.07■■□□□ 1.6
MSH2-203ENST00000454849 DYNLT1P63172 113 aa25.07■■□□□ 1.6
MSH2-203ENST00000454849 TCEAL1Q15170 157 aa25.07■■□□□ 1.6
MSH2-203ENST00000454849 CCDC157Q569K6 752 aa25.07■■□□□ 1.6
MSH2-203ENST00000454849 NPNTQ6UXI9 565 aa25.07■■□□□ 1.6
MSH2-203ENST00000454849 TMTC1Q8IUR5 882 aa25.07■■□□□ 1.6
MSH2-203ENST00000454849 SLC22A18ASQ8N1D0 253 aa25.07■■□□□ 1.6
MSH2-203ENST00000454849 CCNYQ8ND76 341 aa25.07■■□□□ 1.6
MSH2-203ENST00000454849 ACRBPQ8NEB7 543 aa25.07■■□□□ 1.6
MSH2-203ENST00000454849 MBNL1Q9NR56 388 aaKnown RBP25.07■■□□□ 1.6
MSH2-203ENST00000454849 SALL4Q9UJQ4 1053 aa25.07■■□□□ 1.6
MSH2-203ENST00000454849 REXO2Q9Y3B8 237 aaKnown RBP25.07■■□□□ 1.6
MSH2-203ENST00000454849 HEY1Q9Y5J3 304 aa25.07■■□□□ 1.6
MSH2-203ENST00000454849 ALG6Q9Y672 507 aa25.07■■□□□ 1.6
MSH2-203ENST00000454849 DUSP10Q9Y6W6 482 aa25.07■■□□□ 1.6
MSH2-203ENST00000454849 RIOK3O14730 519 aaKnown RBP25.06■■□□□ 1.6
MSH2-203ENST00000454849 PCDHGA12O60330 932 aa25.06■■□□□ 1.6
MSH2-203ENST00000454849 ARRB1P49407 418 aaPredicted RBP25.06■■□□□ 1.6
MSH2-203ENST00000454849 AP1S1P61966 158 aa25.06■■□□□ 1.6
MSH2-203ENST00000454849 OVGP1Q12889 678 aa25.06■■□□□ 1.6
MSH2-203ENST00000454849 PTPRRQ15256 657 aa25.06■■□□□ 1.6
MSH2-203ENST00000454849 TMEM52BQ4KMG9 183 aa25.06■■□□□ 1.6
MSH2-203ENST00000454849 ODF2Q5BJF6 829 aa25.06■■□□□ 1.6
MSH2-203ENST00000454849 TPRG1LQ5T0D9 272 aa25.06■■□□□ 1.6
MSH2-203ENST00000454849 BRAT1Q6PJG6 821 aa25.06■■□□□ 1.6
MSH2-203ENST00000454849 ABI3BPQ7Z7G0 1075 aa25.06■■□□□ 1.6
MSH2-203ENST00000454849 RFX6Q8HWS3 928 aa25.06■■□□□ 1.6
MSH2-203ENST00000454849 RHOT1Q8IXI2 618 aa25.06■■□□□ 1.6
MSH2-203ENST00000454849 SAP25Q8TEE9 199 aa25.06■■□□□ 1.6
MSH2-203ENST00000454849 MGME1Q9BQP7 344 aa25.06■■□□□ 1.6
MSH2-203ENST00000454849 MAK16Q9BXY0 300 aaKnown RBP25.06■■□□□ 1.6
MSH2-203ENST00000454849 DTLQ9NZJ0 730 aa25.06■■□□□ 1.6
MSH2-203ENST00000454849 ATP8A1Q9Y2Q0 1164 aa25.06■■□□□ 1.6
MSH2-203ENST00000454849 TTLL3Q9Y4R7 772 aa25.06■■□□□ 1.6
MSH2-203ENST00000454849 HS3ST3A1Q9Y663 406 aa25.06■■□□□ 1.6
MSH2-203ENST00000454849 A6NNZ2 444 aa25.05■■□□□ 1.6
MSH2-203ENST00000454849 TRAFD1O14545 582 aaPredicted RBP25.05■■□□□ 1.6
MSH2-203ENST00000454849 FPGTO14772 594 aa25.05■■□□□ 1.6
MSH2-203ENST00000454849 MAGEC1O60732 1142 aa25.05■■□□□ 1.6
MSH2-203ENST00000454849 TM7SF2O76062 418 aa25.05■■□□□ 1.6
MSH2-203ENST00000454849 ATXN1LP0C7T5 689 aaKnown RBP25.05■■□□□ 1.6
MSH2-203ENST00000454849 CR2P20023 1033 aa25.05■■□□□ 1.6
MSH2-203ENST00000454849 SLC1A1P43005 524 aa25.05■■□□□ 1.6
MSH2-203ENST00000454849 LIG3P49916 1009 aa25.05■■□□□ 1.6
MSH2-203ENST00000454849 ERAP2Q6P179 960 aa25.05■■□□□ 1.6
MSH2-203ENST00000454849 MFSD7Q6UXD7 560 aa25.05■■□□□ 1.6
MSH2-203ENST00000454849 SLCO6A1Q86UG4 719 aa25.05■■□□□ 1.6
MSH2-203ENST00000454849 BBS5Q8N3I7 341 aa25.05■■□□□ 1.6
MSH2-203ENST00000454849 EID2Q8N6I1 236 aa25.05■■□□□ 1.6
MSH2-203ENST00000454849 PLD5Q8N7P1 536 aa25.05■■□□□ 1.6
MSH2-203ENST00000454849 TRAF3IP1Q8TDR0 691 aaPredicted RBP25.05■■□□□ 1.6
MSH2-203ENST00000454849 HCAR2Q8TDS4 363 aa25.05■■□□□ 1.6
MSH2-203ENST00000454849 NUDCD1Q96RS6 583 aa25.05■■□□□ 1.6
MSH2-203ENST00000454849 LGMNQ99538 433 aa25.05■■□□□ 1.6
MSH2-203ENST00000454849 ERVMER34-1Q9H9K5 563 aa25.05■■□□□ 1.6
MSH2-203ENST00000454849 RBM22Q9NW64 420 aaKnown RBP eCLIP25.05■■□□□ 1.6
MSH2-203ENST00000454849 C6P13671 934 aa25.04■■□□□ 1.6
MSH2-203ENST00000454849 FECHP22830 423 aa25.04■■□□□ 1.6
MSH2-203ENST00000454849 EPHA8P29322 1005 aaPredicted RBP25.04■■□□□ 1.6
MSH2-203ENST00000454849 GRK6P43250 576 aa25.04■■□□□ 1.6
MSH2-203ENST00000454849 MARCKSL1P49006 195 aa25.04■■□□□ 1.6
MSH2-203ENST00000454849 ELP6Q0PNE2 266 aa25.04■■□□□ 1.6
MSH2-203ENST00000454849 TRAF2Q12933 501 aa25.04■■□□□ 1.6
MSH2-203ENST00000454849 IFI16Q16666 785 aaKnown RBP25.04■■□□□ 1.6
MSH2-203ENST00000454849 LRRC38Q5VT99 294 aa25.04■■□□□ 1.6
MSH2-203ENST00000454849 CENPTQ96BT3 561 aa25.04■■□□□ 1.6
MSH2-203ENST00000454849 ECHDC3Q96DC8 303 aa25.04■■□□□ 1.6
MSH2-203ENST00000454849 LENG8Q96PV6 779 aaPredicted RBP25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms