RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 MMP12P39900 470 aa14.3□□□□□ -0.12
HDAC4-205ENST00000454542 CTSKP43235 329 aa14.3□□□□□ -0.12
HDAC4-205ENST00000454542 NR2C2P49116 596 aa14.3□□□□□ -0.12
HDAC4-205ENST00000454542 MAXP61244 160 aa14.3□□□□□ -0.12
HDAC4-205ENST00000454542 RPS21P63220 83 aaKnown RBP14.3□□□□□ -0.12
HDAC4-205ENST00000454542 TRAF2Q12933 501 aa14.3□□□□□ -0.12
HDAC4-205ENST00000454542 PDK1Q15118 436 aa14.3□□□□□ -0.12
HDAC4-205ENST00000454542 PRKD1Q15139 912 aaPredicted RBP14.3□□□□□ -0.12
HDAC4-205ENST00000454542 TEAD4Q15561 434 aa14.3□□□□□ -0.12
HDAC4-205ENST00000454542 UGP2Q16851 508 aa14.3□□□□□ -0.12
HDAC4-205ENST00000454542 TMEM52BQ4KMG9 183 aa14.3□□□□□ -0.12
HDAC4-205ENST00000454542 LAYNQ6UX15 382 aa14.3□□□□□ -0.12
HDAC4-205ENST00000454542 BBS12Q6ZW61 710 aa14.3□□□□□ -0.12
HDAC4-205ENST00000454542 IQCHQ86VS3 1027 aa14.3□□□□□ -0.12
HDAC4-205ENST00000454542 SYCE1Q8N0S2 351 aa14.3□□□□□ -0.12
HDAC4-205ENST00000454542 MINDY1Q8N5J2 469 aa14.3□□□□□ -0.12
HDAC4-205ENST00000454542 DENND6BQ8NEG7 585 aa14.3□□□□□ -0.12
HDAC4-205ENST00000454542 ALG3Q92685 438 aa14.3□□□□□ -0.12
HDAC4-205ENST00000454542 LGMNQ99538 433 aa14.3□□□□□ -0.12
HDAC4-205ENST00000454542 HERPUD2Q9BSE4 406 aa14.3□□□□□ -0.12
HDAC4-205ENST00000454542 POLR1EQ9GZS1 481 aaKnown RBP14.3□□□□□ -0.12
HDAC4-205ENST00000454542 BRD8Q9H0E9 1235 aa14.3□□□□□ -0.12
HDAC4-205ENST00000454542 GPR27Q9NS67 375 aa14.3□□□□□ -0.12
HDAC4-205ENST00000454542 ATP8A1Q9Y2Q0 1164 aa14.3□□□□□ -0.12
HDAC4-205ENST00000454542 A0A1B0GVT2 93 aa14.29□□□□□ -0.12
HDAC4-205ENST00000454542 A0A1W2PQ67 120 aa14.29□□□□□ -0.12
HDAC4-205ENST00000454542 MIF4GDA9UHW6 222 aaKnown RBP14.29□□□□□ -0.12
HDAC4-205ENST00000454542 PRAMEF26H0Y7S4 382 aa14.29□□□□□ -0.12
HDAC4-205ENST00000454542 DDX3YO15523 660 aaKnown RBP14.29□□□□□ -0.12
HDAC4-205ENST00000454542 FZD6O60353 706 aa14.29□□□□□ -0.12
HDAC4-205ENST00000454542 CST8O60676 142 aa14.29□□□□□ -0.12
HDAC4-205ENST00000454542 ZNF883P0CG24 379 aa14.29□□□□□ -0.12
HDAC4-205ENST00000454542 HNRNPA2B1P22626 353 aaKnown RBP14.29□□□□□ -0.12
HDAC4-205ENST00000454542 CD38P28907 300 aa14.29□□□□□ -0.12
HDAC4-205ENST00000454542 MAT2AP31153 395 aaKnown RBP14.29□□□□□ -0.12
HDAC4-205ENST00000454542 SCNN1BP51168 640 aa14.29□□□□□ -0.12
HDAC4-205ENST00000454542 BCL2L1Q07817 233 aa14.29□□□□□ -0.12
HDAC4-205ENST00000454542 ELP6Q0PNE2 266 aa14.29□□□□□ -0.12
HDAC4-205ENST00000454542 RALGDSQ12967 914 aa14.29□□□□□ -0.12
HDAC4-205ENST00000454542 ZBTB17Q13105 803 aa14.29□□□□□ -0.12
HDAC4-205ENST00000454542 IHHQ14623 411 aa14.29□□□□□ -0.12
HDAC4-205ENST00000454542 PUM1Q14671 1186 aaKnown RBP eCLIP14.29□□□□□ -0.12
HDAC4-205ENST00000454542 ZNF423Q2M1K9 1284 aa14.29□□□□□ -0.12
HDAC4-205ENST00000454542 ODF2Q5BJF6 829 aa14.29□□□□□ -0.12
HDAC4-205ENST00000454542 LRRC73Q5JTD7 316 aa14.29□□□□□ -0.12
HDAC4-205ENST00000454542 IL27RAQ6UWB1 636 aa14.29□□□□□ -0.12
HDAC4-205ENST00000454542 GCNT7Q6ZNI0 430 aa14.29□□□□□ -0.12
HDAC4-205ENST00000454542 ABI3BPQ7Z7G0 1075 aa14.29□□□□□ -0.12
HDAC4-205ENST00000454542 ARRDC2Q8TBH0 407 aa14.29□□□□□ -0.12
HDAC4-205ENST00000454542 SERAC1Q96JX3 654 aa14.29□□□□□ -0.12
HDAC4-205ENST00000454542 PDLIM2Q96JY6 352 aa14.29□□□□□ -0.12
HDAC4-205ENST00000454542 KLF6Q99612 283 aaPredicted RBP14.29□□□□□ -0.12
HDAC4-205ENST00000454542 C1QTNF2Q9BXJ5 285 aa14.29□□□□□ -0.12
HDAC4-205ENST00000454542 MAK16Q9BXY0 300 aaKnown RBP14.29□□□□□ -0.12
HDAC4-205ENST00000454542 NOD2Q9HC29 1040 aa14.29□□□□□ -0.12
HDAC4-205ENST00000454542 NT5MQ9NPB1 228 aa14.29□□□□□ -0.12
HDAC4-205ENST00000454542 PCDH12Q9NPG4 1184 aa14.29□□□□□ -0.12
HDAC4-205ENST00000454542 SCUBE2Q9NQ36 999 aa14.29□□□□□ -0.12
HDAC4-205ENST00000454542 ANKRD6Q9Y2G4 727 aa14.29□□□□□ -0.12
HDAC4-205ENST00000454542 HEY1Q9Y5J3 304 aa14.29□□□□□ -0.12
HDAC4-205ENST00000454542 SPTBN4Q9H254 2564 aa14.29□□□□□ -0.12
HDAC4-205ENST00000454542 CACNA1AO00555 2505 aa14.29□□□□□ -0.12
HDAC4-205ENST00000454542 TTC24A2A3L6 582 aaPredicted RBP14.28□□□□□ -0.12
HDAC4-205ENST00000454542 C4orf47A7E2U8 309 aa14.28□□□□□ -0.12
HDAC4-205ENST00000454542 APOC4-APOC2K7ER74 178 aa14.28□□□□□ -0.12
HDAC4-205ENST00000454542 RIOK3O14730 519 aaKnown RBP14.28□□□□□ -0.12
HDAC4-205ENST00000454542 KRT86O43790 486 aa14.28□□□□□ -0.12
HDAC4-205ENST00000454542 PCDH8O95206 1070 aa14.28□□□□□ -0.12
HDAC4-205ENST00000454542 CER1O95813 267 aa14.28□□□□□ -0.12
HDAC4-205ENST00000454542 APOC2P02655 101 aa14.28□□□□□ -0.12
HDAC4-205ENST00000454542 CCDC175P0C221 793 aa14.28□□□□□ -0.12
HDAC4-205ENST00000454542 CCNB1P14635 433 aa14.28□□□□□ -0.12
HDAC4-205ENST00000454542 PRLRP16471 622 aa14.28□□□□□ -0.12
HDAC4-205ENST00000454542 ID4P47928 161 aa14.28□□□□□ -0.12
HDAC4-205ENST00000454542 CSNK1EP49674 416 aaKnown RBP14.28□□□□□ -0.12
HDAC4-205ENST00000454542 NAP1L1P55209 391 aaKnown RBP14.28□□□□□ -0.12
HDAC4-205ENST00000454542 RWDD2BP57060 319 aa14.28□□□□□ -0.12
HDAC4-205ENST00000454542 DYNLT1P63172 113 aa14.28□□□□□ -0.12
HDAC4-205ENST00000454542 OVGP1Q12889 678 aa14.28□□□□□ -0.12
HDAC4-205ENST00000454542 AGERQ15109 404 aa14.28□□□□□ -0.12
HDAC4-205ENST00000454542 KIF19Q2TAC6 998 aa14.28□□□□□ -0.12
HDAC4-205ENST00000454542 KYAT3Q6YP21 454 aaKnown RBP14.28□□□□□ -0.12
HDAC4-205ENST00000454542 PEX26Q7Z412 305 aa14.28□□□□□ -0.12
HDAC4-205ENST00000454542 CNTD1Q8N815 330 aa14.28□□□□□ -0.12
HDAC4-205ENST00000454542 MFSD2AQ8NA29 543 aa14.28□□□□□ -0.12
HDAC4-205ENST00000454542 LRRN4Q8WUT4 740 aa14.28□□□□□ -0.12
HDAC4-205ENST00000454542 UBE2Q2Q8WVN8 375 aa14.28□□□□□ -0.12
HDAC4-205ENST00000454542 HES6Q96HZ4 224 aa14.28□□□□□ -0.12
HDAC4-205ENST00000454542 FEM1CQ96JP0 617 aa14.28□□□□□ -0.12
HDAC4-205ENST00000454542 QKIQ96PU8 341 aaKnown RBP eCLIP14.28□□□□□ -0.12
HDAC4-205ENST00000454542 LENG8Q96PV6 779 aaPredicted RBP14.28□□□□□ -0.12
HDAC4-205ENST00000454542 SEMA3CQ99985 751 aa14.28□□□□□ -0.12
HDAC4-205ENST00000454542 RBM22Q9NW64 420 aaKnown RBP eCLIP14.28□□□□□ -0.12
HDAC4-205ENST00000454542 AMFRQ9UKV5 643 aa14.28□□□□□ -0.12
HDAC4-205ENST00000454542 SNX11Q9Y5W9 270 aa14.28□□□□□ -0.12
HDAC4-205ENST00000454542 ASCC3Q8N3C0 2202 aaKnown RBP14.27□□□□□ -0.12
HDAC4-205ENST00000454542 CFAP69A5D8W1 941 aa14.27□□□□□ -0.13
HDAC4-205ENST00000454542 KCNK1O00180 336 aa14.27□□□□□ -0.13
HDAC4-205ENST00000454542 RAD51BO15315 384 aa14.27□□□□□ -0.13
HDAC4-205ENST00000454542 PGLSO95336 258 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms