RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 ALDOAP04075 364 aaKnown RBP14.36□□□□□ -0.11
USP39-207ENST00000450066 FSHRP23945 695 aa14.36□□□□□ -0.11
USP39-207ENST00000450066 BMP8BP34820 402 aa14.36□□□□□ -0.11
USP39-207ENST00000450066 CSNK1DP48730 415 aa14.36□□□□□ -0.11
USP39-207ENST00000450066 NEK3P51956 506 aa14.36□□□□□ -0.11
USP39-207ENST00000450066 UGP2Q16851 508 aa14.36□□□□□ -0.11
USP39-207ENST00000450066 FUT11Q495W5 492 aa14.36□□□□□ -0.11
USP39-207ENST00000450066 RARS2Q5T160 578 aaKnown RBP14.36□□□□□ -0.11
USP39-207ENST00000450066 ASTLQ6HA08 431 aaPredicted RBP14.36□□□□□ -0.11
USP39-207ENST00000450066 GPR149Q86SP6 731 aa14.36□□□□□ -0.11
USP39-207ENST00000450066 TAX1BP1Q86VP1 789 aa14.36□□□□□ -0.11
USP39-207ENST00000450066 BLOC1S5Q8TDH9 187 aa14.36□□□□□ -0.11
USP39-207ENST00000450066 CHMP6Q96FZ7 201 aa14.36□□□□□ -0.11
USP39-207ENST00000450066 LRRC3BQ96PB8 259 aa14.36□□□□□ -0.11
USP39-207ENST00000450066 ZNF317Q96PQ6 595 aaPredicted RBP14.36□□□□□ -0.11
USP39-207ENST00000450066 SLC2A11Q9BYW1 496 aa14.36□□□□□ -0.11
USP39-207ENST00000450066 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.36□□□□□ -0.114e-10■■■□□ 17.5
USP39-207ENST00000450066 GGA2Q9UJY4 613 aa14.36□□□□□ -0.11
USP39-207ENST00000450066 RIMKLBQ9ULI2 386 aa14.36□□□□□ -0.11
USP39-207ENST00000450066 NUP210Q8TEM1 1887 aaPredicted RBP14.36□□□□□ -0.11
USP39-207ENST00000450066 COPEO14579 308 aa14.35□□□□□ -0.11
USP39-207ENST00000450066 TIMM44O43615 452 aa14.35□□□□□ -0.11
USP39-207ENST00000450066 FAM107AO95990 144 aa14.35□□□□□ -0.11
USP39-207ENST00000450066 MAPK8P45983 427 aa14.35□□□□□ -0.11
USP39-207ENST00000450066 PDE1BQ01064 536 aa14.35□□□□□ -0.11
USP39-207ENST00000450066 THOC5Q13769 683 aaKnown RBP14.35□□□□□ -0.11
USP39-207ENST00000450066 DMC1Q14565 340 aa14.35□□□□□ -0.11
USP39-207ENST00000450066 FAM78AQ5JUQ0 283 aa14.35□□□□□ -0.11
USP39-207ENST00000450066 ATXN7L2Q5T6C5 722 aaPredicted RBP14.35□□□□□ -0.11
USP39-207ENST00000450066 FSTL4Q6MZW2 842 aa14.35□□□□□ -0.11
USP39-207ENST00000450066 GABPB2Q8TAK5 448 aaPredicted RBP14.35□□□□□ -0.11
USP39-207ENST00000450066 GDAP1Q8TB36 358 aa14.35□□□□□ -0.11
USP39-207ENST00000450066 FGF13Q92913 245 aa14.35□□□□□ -0.11
USP39-207ENST00000450066 ATP2A3Q93084 1043 aa14.35□□□□□ -0.11
USP39-207ENST00000450066 TIFAQ96CG3 184 aa14.35□□□□□ -0.11
USP39-207ENST00000450066 RMDN1Q96DB5 314 aa14.35□□□□□ -0.11
USP39-207ENST00000450066 ASB16Q96NS5 453 aa14.35□□□□□ -0.11
USP39-207ENST00000450066 CCT8L2Q96SF2 557 aa14.35□□□□□ -0.11
USP39-207ENST00000450066 FAM167BQ9BTA0 163 aa14.35□□□□□ -0.11
USP39-207ENST00000450066 GDE1Q9NZC3 331 aa14.35□□□□□ -0.11
USP39-207ENST00000450066 HS3ST2Q9Y278 367 aa14.35□□□□□ -0.11
USP39-207ENST00000450066 SLC7A4O43246 635 aa14.35□□□□□ -0.11
USP39-207ENST00000450066 ZNF821O75541 412 aaPredicted RBP14.35□□□□□ -0.11
USP39-207ENST00000450066 GLP2RO95838 553 aa14.35□□□□□ -0.11
USP39-207ENST00000450066 PDHA1P08559 390 aa14.35□□□□□ -0.11
USP39-207ENST00000450066 PABPC1P11940 636 aaKnown RBP14.35□□□□□ -0.11
USP39-207ENST00000450066 ACVR1Q04771 509 aa14.35□□□□□ -0.11
USP39-207ENST00000450066 SULT2A1Q06520 285 aa14.35□□□□□ -0.11
USP39-207ENST00000450066 TRAF2Q12933 501 aa14.35□□□□□ -0.11
USP39-207ENST00000450066 SEPT7Q16181 437 aaKnown RBP14.35□□□□□ -0.11
USP39-207ENST00000450066 HHATQ5VTY9 493 aa14.35□□□□□ -0.11
USP39-207ENST00000450066 NEPROQ6NW34 567 aa14.35□□□□□ -0.11
USP39-207ENST00000450066 ZNF771Q7L3S4 317 aaPredicted RBP14.35□□□□□ -0.11
USP39-207ENST00000450066 TDHQ8IZJ6 230 aa14.35□□□□□ -0.11
USP39-207ENST00000450066 NDUFAF2Q8N183 169 aa14.35□□□□□ -0.11
USP39-207ENST00000450066 EFHBQ8N7U6 833 aa14.35□□□□□ -0.11
USP39-207ENST00000450066 CALML6Q8TD86 181 aa14.35□□□□□ -0.11
USP39-207ENST00000450066 OSCP1Q8WVF1 389 aa14.35□□□□□ -0.11
USP39-207ENST00000450066 SMARCD2Q92925 531 aa14.35□□□□□ -0.11
USP39-207ENST00000450066 PTPRN2Q92932 1015 aa14.35□□□□□ -0.11
USP39-207ENST00000450066 ISL2Q96A47 359 aa14.35□□□□□ -0.11
USP39-207ENST00000450066 ISG20Q96AZ6 181 aaKnown RBP14.35□□□□□ -0.11
USP39-207ENST00000450066 RSPRY1Q96DX4 576 aa14.35□□□□□ -0.11
USP39-207ENST00000450066 MAGEB18Q96M61 343 aa14.35□□□□□ -0.11
USP39-207ENST00000450066 SRPK1Q96SB4 655 aaKnown RBP14.35□□□□□ -0.11
USP39-207ENST00000450066 PAIP2Q9BPZ3 127 aaKnown RBP14.35□□□□□ -0.11
USP39-207ENST00000450066 NSUN3Q9H649 340 aaKnown RBP14.35□□□□□ -0.11
USP39-207ENST00000450066 DUS2Q9NX74 493 aaKnown RBP14.35□□□□□ -0.11
USP39-207ENST00000450066 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.34□□□□□ -0.11
USP39-207ENST00000450066 ANKRD66B4E2M5 251 aa14.34□□□□□ -0.11
USP39-207ENST00000450066 NDUFAB1O14561 156 aa14.34□□□□□ -0.11
USP39-207ENST00000450066 CRTAMO95727 393 aa14.34□□□□□ -0.11
USP39-207ENST00000450066 SRCP12931 536 aa14.34□□□□□ -0.11
USP39-207ENST00000450066 CRHR1P34998 444 aa14.34□□□□□ -0.11
USP39-207ENST00000450066 HADHAP40939 763 aa14.34□□□□□ -0.11
USP39-207ENST00000450066 VIPR2P41587 438 aa14.34□□□□□ -0.11
USP39-207ENST00000450066 CTSOP43234 321 aaPredicted RBP14.34□□□□□ -0.11
USP39-207ENST00000450066 CCT5P48643 541 aa14.34□□□□□ -0.11
USP39-207ENST00000450066 HYAL1Q12794 435 aa14.34□□□□□ -0.11
USP39-207ENST00000450066 LVRNQ6Q4G3 990 aa14.34□□□□□ -0.11
USP39-207ENST00000450066 KIAA0408Q6ZU52 694 aa14.34□□□□□ -0.11
USP39-207ENST00000450066 KIAA0907Q7Z7F0 614 aaPredicted RBP14.34□□□□□ -0.11
USP39-207ENST00000450066 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.34□□□□□ -0.11
USP39-207ENST00000450066 LPCAT1Q8NF37 534 aa14.34□□□□□ -0.11
USP39-207ENST00000450066 TM6SF2Q9BZW4 377 aa14.34□□□□□ -0.11
USP39-207ENST00000450066 IQCGQ9H095 443 aaKnown RBP14.34□□□□□ -0.11
USP39-207ENST00000450066 RHOJQ9H4E5 214 aa14.34□□□□□ -0.11
USP39-207ENST00000450066 RABEP2Q9H5N1 569 aa14.34□□□□□ -0.11
USP39-207ENST00000450066 ARL5AQ9Y689 179 aa14.34□□□□□ -0.11
USP39-207ENST00000450066 C2orf16Q68DN1 1984 aa14.34□□□□□ -0.11
USP39-207ENST00000450066 TPP1O14773 563 aa14.34□□□□□ -0.11
USP39-207ENST00000450066 FZD6O60353 706 aa14.34□□□□□ -0.11
USP39-207ENST00000450066 AHSGP02765 367 aa14.34□□□□□ -0.11
USP39-207ENST00000450066 PRKCGP05129 697 aa14.34□□□□□ -0.11
USP39-207ENST00000450066 MAGEA12P43365 314 aa14.34□□□□□ -0.11
USP39-207ENST00000450066 DHCR24Q15392 516 aa14.34□□□□□ -0.11
USP39-207ENST00000450066 EML3Q32P44 896 aa14.34□□□□□ -0.11
USP39-207ENST00000450066 DGKKQ5KSL6 1271 aa14.34□□□□□ -0.11
USP39-207ENST00000450066 ZNF470Q6ECI4 717 aa14.34□□□□□ -0.11
USP39-207ENST00000450066 ZC3HC1Q86WB0 502 aaKnown RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms