RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 AUHQ13825 339 aaKnown RBP12.72□□□□□ -0.37
AC004540.1-204ENST00000449537 NFATC4Q14934 902 aa12.72□□□□□ -0.37
AC004540.1-204ENST00000449537 STK38Q15208 465 aa12.72□□□□□ -0.37
AC004540.1-204ENST00000449537 PRR30Q53SZ7 412 aaPredicted RBP12.72□□□□□ -0.37
AC004540.1-204ENST00000449537 CARD16Q5EG05 197 aa12.72□□□□□ -0.37
AC004540.1-204ENST00000449537 SPECC1LQ69YQ0 1117 aa12.72□□□□□ -0.37
AC004540.1-204ENST00000449537 LCLAT1Q6UWP7 414 aa12.72□□□□□ -0.37
AC004540.1-204ENST00000449537 TP53I13Q8NBR0 393 aaPredicted RBP12.72□□□□□ -0.37
AC004540.1-204ENST00000449537 SEMA4DQ92854 862 aa12.72□□□□□ -0.37
AC004540.1-204ENST00000449537 CTRCQ99895 268 aa12.72□□□□□ -0.37
AC004540.1-204ENST00000449537 ZPBPQ9BS86 351 aa12.72□□□□□ -0.37
AC004540.1-204ENST00000449537 CUEDC2Q9H467 287 aa12.72□□□□□ -0.37
AC004540.1-204ENST00000449537 MRPL40Q9NQ50 206 aaKnown RBP12.72□□□□□ -0.37
AC004540.1-204ENST00000449537 VANGL2Q9ULK5 521 aa12.72□□□□□ -0.37
AC004540.1-204ENST00000449537 TNRC6AQ8NDV7 1962 aaKnown RBP12.72□□□□□ -0.37
AC004540.1-204ENST00000449537 ABCA2Q9BZC7 2435 aa12.71□□□□□ -0.37
AC004540.1-204ENST00000449537 GOLGA6L22H0YM25 854 aa12.71□□□□□ -0.37
AC004540.1-204ENST00000449537 DIAPH2O60879 1101 aa12.71□□□□□ -0.37
AC004540.1-204ENST00000449537 ZNF821O75541 412 aaPredicted RBP12.71□□□□□ -0.37
AC004540.1-204ENST00000449537 RHOCP08134 193 aa12.71□□□□□ -0.37
AC004540.1-204ENST00000449537 FURINP09958 794 aa12.71□□□□□ -0.37
AC004540.1-204ENST00000449537 STAT5AP42229 794 aa12.71□□□□□ -0.37
AC004540.1-204ENST00000449537 IRAK1P51617 712 aa12.71□□□□□ -0.37
AC004540.1-204ENST00000449537 CCNHP51946 323 aaPredicted RBP12.71□□□□□ -0.37
AC004540.1-204ENST00000449537 PGDP52209 483 aa12.71□□□□□ -0.37
AC004540.1-204ENST00000449537 CDH4P55283 916 aa12.71□□□□□ -0.37
AC004540.1-204ENST00000449537 CEBPZQ03701 1054 aaKnown RBP12.71□□□□□ -0.37
AC004540.1-204ENST00000449537 SLC39A14Q15043 492 aa12.71□□□□□ -0.37
AC004540.1-204ENST00000449537 KLHL40Q2TBA0 621 aa12.71□□□□□ -0.37
AC004540.1-204ENST00000449537 ZNF805Q5CZA5 627 aa12.71□□□□□ -0.37
AC004540.1-204ENST00000449537 ZRANB3Q5FWF4 1079 aa12.71□□□□□ -0.37
AC004540.1-204ENST00000449537 CEACAM20Q6UY09 585 aa12.71□□□□□ -0.37
AC004540.1-204ENST00000449537 NYAP1Q6ZVC0 841 aa12.71□□□□□ -0.37
AC004540.1-204ENST00000449537 BEND5Q7L4P6 421 aa12.71□□□□□ -0.37
AC004540.1-204ENST00000449537 IRF2BP1Q8IU81 584 aa12.71□□□□□ -0.37
AC004540.1-204ENST00000449537 APLFQ8IW19 511 aaPredicted RBP12.71□□□□□ -0.37
AC004540.1-204ENST00000449537 EEF2KMTQ96G04 330 aa12.71□□□□□ -0.37
AC004540.1-204ENST00000449537 WDR92Q96MX6 357 aa12.71□□□□□ -0.37
AC004540.1-204ENST00000449537 USP28Q96RU2 1077 aa12.71□□□□□ -0.37
AC004540.1-204ENST00000449537 DPYSL5Q9BPU6 564 aa12.71□□□□□ -0.37
AC004540.1-204ENST00000449537 APOOQ9BUR5 198 aa12.71□□□□□ -0.37
AC004540.1-204ENST00000449537 TRIM62Q9BVG3 475 aa12.71□□□□□ -0.37
AC004540.1-204ENST00000449537 SLC4A5Q9BY07 1137 aa12.71□□□□□ -0.37
AC004540.1-204ENST00000449537 ZDHHC6Q9H6R6 413 aa12.71□□□□□ -0.37
AC004540.1-204ENST00000449537 TMEM8AQ9HCN3 771 aa12.71□□□□□ -0.37
AC004540.1-204ENST00000449537 SLAMF7Q9NQ25 335 aa12.71□□□□□ -0.37
AC004540.1-204ENST00000449537 TMEM184BQ9Y519 407 aaPredicted RBP12.71□□□□□ -0.37
AC004540.1-204ENST00000449537 RPS6KL1Q9Y6S9 549 aa12.71□□□□□ -0.37
AC004540.1-204ENST00000449537 DGKBQ9Y6T7 804 aa12.71□□□□□ -0.37
AC004540.1-204ENST00000449537 ARHGEF17Q96PE2 2063 aaPredicted RBP12.71□□□□□ -0.38
AC004540.1-204ENST00000449537 PVALEFA0A1B0GWK0 134 aa12.7□□□□□ -0.38
AC004540.1-204ENST00000449537 PDXKO00764 312 aa12.7□□□□□ -0.38
AC004540.1-204ENST00000449537 MAPK13O15264 365 aa12.7□□□□□ -0.38
AC004540.1-204ENST00000449537 SART1O43290 800 aaKnown RBP12.7□□□□□ -0.38
AC004540.1-204ENST00000449537 STK17BO94768 372 aa12.7□□□□□ -0.38
AC004540.1-204ENST00000449537 CBX6O95503 412 aa12.7□□□□□ -0.38
AC004540.1-204ENST00000449537 THRAP10827 490 aa12.7□□□□□ -0.38
AC004540.1-204ENST00000449537 KRT13P13646 458 aa12.7□□□□□ -0.38
AC004540.1-204ENST00000449537 F8A1P23610 371 aa12.7□□□□□ -0.38
AC004540.1-204ENST00000449537 GPR3P46089 330 aa12.7□□□□□ -0.38
AC004540.1-204ENST00000449537 MC2RQ01718 297 aa12.7□□□□□ -0.38
AC004540.1-204ENST00000449537 DNM1Q05193 864 aaKnown RBP12.7□□□□□ -0.38
AC004540.1-204ENST00000449537 SLC20A2Q08357 652 aa12.7□□□□□ -0.38
AC004540.1-204ENST00000449537 BIRC2Q13490 618 aa12.7□□□□□ -0.38
AC004540.1-204ENST00000449537 SQSTM1Q13501 440 aa12.7□□□□□ -0.38
AC004540.1-204ENST00000449537 LRRC14Q15048 493 aa12.7□□□□□ -0.38
AC004540.1-204ENST00000449537 IRF4Q15306 451 aa12.7□□□□□ -0.38
AC004540.1-204ENST00000449537 E2F4Q16254 413 aa12.7□□□□□ -0.38
AC004540.1-204ENST00000449537 NKAIN2Q5VXU1 208 aa12.7□□□□□ -0.38
AC004540.1-204ENST00000449537 KRT39Q6A163 491 aa12.7□□□□□ -0.38
AC004540.1-204ENST00000449537 RETSATQ6NUM9 610 aa12.7□□□□□ -0.38
AC004540.1-204ENST00000449537 INTS8Q75QN2 995 aaKnown RBP12.7□□□□□ -0.38
AC004540.1-204ENST00000449537 ZNF438Q7Z4V0 828 aa12.7□□□□□ -0.38
AC004540.1-204ENST00000449537 TTC7BQ86TV6 843 aa12.7□□□□□ -0.38
AC004540.1-204ENST00000449537 ESX1Q8N693 406 aa12.7□□□□□ -0.38
AC004540.1-204ENST00000449537 PCDH20Q8N6Y1 951 aaKnown RBP12.7□□□□□ -0.38
AC004540.1-204ENST00000449537 BMPERQ8N8U9 685 aa12.7□□□□□ -0.38
AC004540.1-204ENST00000449537 DCAF4L2Q8NA75 395 aa12.7□□□□□ -0.38
AC004540.1-204ENST00000449537 LINC00301Q8NCQ3 95 aa12.7□□□□□ -0.38
AC004540.1-204ENST00000449537 KIAA1524Q8TCG1 905 aa12.7□□□□□ -0.38
AC004540.1-204ENST00000449537 CXorf40AQ8TE69 158 aa12.7□□□□□ -0.38
AC004540.1-204ENST00000449537 DHX58Q96C10 678 aa12.7□□□□□ -0.38
AC004540.1-204ENST00000449537 SPATA32Q96LK8 384 aa12.7□□□□□ -0.38
AC004540.1-204ENST00000449537 SLC25A23Q9BV35 468 aa12.7□□□□□ -0.38
AC004540.1-204ENST00000449537 CEP44Q9C0F1 390 aa12.7□□□□□ -0.38
AC004540.1-204ENST00000449537 RAB20Q9NX57 234 aa12.7□□□□□ -0.38
AC004540.1-204ENST00000449537 KCND3Q9UK17 655 aa12.7□□□□□ -0.38
AC004540.1-204ENST00000449537 ZNF106Q9H2Y7 1883 aaKnown RBP12.7□□□□□ -0.38
AC004540.1-204ENST00000449537 CCDC168Q8NDH2 2452 aa12.69□□□□□ -0.38
AC004540.1-204ENST00000449537 HEATR9A2RTY3 570 aa12.69□□□□□ -0.38
AC004540.1-204ENST00000449537 CDC14CA4D256 554 aa12.69□□□□□ -0.38
AC004540.1-204ENST00000449537 AREL1O15033 823 aa12.69□□□□□ -0.38
AC004540.1-204ENST00000449537 LRCH4O75427 683 aa12.69□□□□□ -0.38
AC004540.1-204ENST00000449537 KATNA1O75449 491 aa12.69□□□□□ -0.38
AC004540.1-204ENST00000449537 DNAJB5O75953 348 aa12.69□□□□□ -0.38
AC004540.1-204ENST00000449537 IGLV3-25P01717 112 aa12.69□□□□□ -0.38
AC004540.1-204ENST00000449537 TIMP2P16035 220 aa12.69□□□□□ -0.38
AC004540.1-204ENST00000449537 CCR1P32246 355 aa12.69□□□□□ -0.38
AC004540.1-204ENST00000449537 DLSTP36957 453 aa12.69□□□□□ -0.38
AC004540.1-204ENST00000449537 MAZP56270 477 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms