RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 TRIM25Q14258 630 aaKnown RBP10.82□□□□□ -0.68
LINC00342-202ENST00000448494 POLD3Q15054 466 aaPredicted RBP10.82□□□□□ -0.68
LINC00342-202ENST00000448494 SKIV2LQ15477 1246 aaKnown RBP10.82□□□□□ -0.68
LINC00342-202ENST00000448494 PARP15Q460N3 678 aa10.82□□□□□ -0.68
LINC00342-202ENST00000448494 LGSNQ5TDP6 509 aa10.82□□□□□ -0.68
LINC00342-202ENST00000448494 PMF1Q6P1K2 205 aa10.82□□□□□ -0.68
LINC00342-202ENST00000448494 KIF18BQ86Y91 864 aa10.82□□□□□ -0.68
LINC00342-202ENST00000448494 RASGRP3Q8IV61 690 aa10.82□□□□□ -0.68
LINC00342-202ENST00000448494 CCDC36Q8IYA8 594 aa10.82□□□□□ -0.68
LINC00342-202ENST00000448494 METTL4Q8N3J2 472 aa10.82□□□□□ -0.68
LINC00342-202ENST00000448494 CBR4Q8N4T8 237 aa10.82□□□□□ -0.68
LINC00342-202ENST00000448494 DHRSXQ8N5I4 330 aa10.82□□□□□ -0.68
LINC00342-202ENST00000448494 C2orf69Q8N8R5 385 aa10.82□□□□□ -0.68
LINC00342-202ENST00000448494 OR13J1Q8NGT2 312 aa10.82□□□□□ -0.68
LINC00342-202ENST00000448494 MUL1Q969V5 352 aa10.82□□□□□ -0.68
LINC00342-202ENST00000448494 TEKT5Q96M29 485 aa10.82□□□□□ -0.68
LINC00342-202ENST00000448494 EYA3Q99504 573 aa10.82□□□□□ -0.68
LINC00342-202ENST00000448494 SORT1Q99523 831 aa10.82□□□□□ -0.68
LINC00342-202ENST00000448494 TTPALQ9BTX7 342 aa10.82□□□□□ -0.68
LINC00342-202ENST00000448494 SLC6A15Q9H2J7 730 aa10.82□□□□□ -0.68
LINC00342-202ENST00000448494 PDZD7Q9H5P4 517 aa10.82□□□□□ -0.68
LINC00342-202ENST00000448494 IFT46Q9NQC8 304 aa10.82□□□□□ -0.68
LINC00342-202ENST00000448494 PMF1-BGLAPU3KQ54 211 aa10.82□□□□□ -0.68
LINC00342-202ENST00000448494 SSX5O60225 188 aa10.82□□□□□ -0.68
LINC00342-202ENST00000448494 AVILO75366 819 aa10.82□□□□□ -0.68
LINC00342-202ENST00000448494 PPM1BO75688 479 aa10.82□□□□□ -0.68
LINC00342-202ENST00000448494 SNAPINO95295 136 aa10.82□□□□□ -0.68
LINC00342-202ENST00000448494 STAU1O95793 577 aaKnown RBP10.82□□□□□ -0.68
LINC00342-202ENST00000448494 WDPCPO95876 746 aa10.82□□□□□ -0.68
LINC00342-202ENST00000448494 FDX1P10109 184 aa10.82□□□□□ -0.68
LINC00342-202ENST00000448494 RALAP11233 206 aa10.82□□□□□ -0.68
LINC00342-202ENST00000448494 KELP23276 732 aa10.82□□□□□ -0.68
LINC00342-202ENST00000448494 MAOBP27338 520 aa10.82□□□□□ -0.68
LINC00342-202ENST00000448494 CRHR1P34998 444 aa10.82□□□□□ -0.68
LINC00342-202ENST00000448494 MSX2P35548 267 aaPredicted RBP10.82□□□□□ -0.68
LINC00342-202ENST00000448494 HOXA1P49639 335 aaPredicted RBP10.82□□□□□ -0.68
LINC00342-202ENST00000448494 SEPHS1P49903 392 aa10.82□□□□□ -0.68
LINC00342-202ENST00000448494 CHRNA2Q15822 529 aa10.82□□□□□ -0.68
LINC00342-202ENST00000448494 CATSPEREQ5SY80 951 aa10.82□□□□□ -0.68
LINC00342-202ENST00000448494 STXBP5Q5T5C0 1151 aa10.82□□□□□ -0.68
LINC00342-202ENST00000448494 VWA5B1Q5TIE3 1220 aa10.82□□□□□ -0.68
LINC00342-202ENST00000448494 PNCKQ6P2M8 343 aa10.82□□□□□ -0.68
LINC00342-202ENST00000448494 BRAT1Q6PJG6 821 aa10.82□□□□□ -0.68
LINC00342-202ENST00000448494 KCNT2Q6UVM3 1135 aa10.82□□□□□ -0.68
LINC00342-202ENST00000448494 ZSCAN18Q8TBC5 510 aaPredicted RBP10.82□□□□□ -0.68
LINC00342-202ENST00000448494 DYNC2LI1Q8TCX1 351 aa10.82□□□□□ -0.68
LINC00342-202ENST00000448494 CYGBQ8WWM9 190 aa10.82□□□□□ -0.68
LINC00342-202ENST00000448494 SLC9A6Q92581 669 aa10.82□□□□□ -0.68
LINC00342-202ENST00000448494 FOXJ1Q92949 421 aa10.82□□□□□ -0.68
LINC00342-202ENST00000448494 AHCYL2Q96HN2 611 aaKnown RBP10.82□□□□□ -0.68
LINC00342-202ENST00000448494 FGFBP2Q9BYJ0 223 aa10.82□□□□□ -0.68
LINC00342-202ENST00000448494 RAB34Q9BZG1 259 aa10.82□□□□□ -0.68
LINC00342-202ENST00000448494 ZFP14Q9HCL3 533 aa10.82□□□□□ -0.68
LINC00342-202ENST00000448494 SNX15Q9NRS6 342 aa10.82□□□□□ -0.68
LINC00342-202ENST00000448494 NIP7Q9Y221 180 aaKnown RBP eCLIP10.82□□□□□ -0.68
LINC00342-202ENST00000448494 MRPS7Q9Y2R9 242 aaKnown RBP10.82□□□□□ -0.68
LINC00342-202ENST00000448494 SLC45A1Q9Y2W3 748 aa10.82□□□□□ -0.68
LINC00342-202ENST00000448494 AKAP11Q9UKA4 1901 aa10.81□□□□□ -0.68
LINC00342-202ENST00000448494 PRAMEF22A3QJZ6 481 aa10.81□□□□□ -0.68
LINC00342-202ENST00000448494 TRIM49D1C9J1S8 452 aa10.81□□□□□ -0.68
LINC00342-202ENST00000448494 CYB561D2O14569 222 aa10.81□□□□□ -0.68
LINC00342-202ENST00000448494 CAPN5O15484 640 aaPredicted RBP10.81□□□□□ -0.68
LINC00342-202ENST00000448494 TADA2AO75478 443 aa10.81□□□□□ -0.68
LINC00342-202ENST00000448494 ALBP02768 609 aa10.81□□□□□ -0.68
LINC00342-202ENST00000448494 CYP2A6P11509 494 aaPredicted RBP10.81□□□□□ -0.68
LINC00342-202ENST00000448494 IFI30P13284 250 aa10.81□□□□□ -0.68
LINC00342-202ENST00000448494 ATP2B4P23634 1241 aa10.81□□□□□ -0.68
LINC00342-202ENST00000448494 NT5C2P49902 561 aa10.81□□□□□ -0.68
LINC00342-202ENST00000448494 SEMA3BQ13214 749 aa10.81□□□□□ -0.68
LINC00342-202ENST00000448494 TNK1Q13470 666 aa10.81□□□□□ -0.68
LINC00342-202ENST00000448494 RBM48Q5RL73 367 aaKnown RBP10.81□□□□□ -0.68
LINC00342-202ENST00000448494 PPP1R26Q5T8A7 1209 aaPredicted RBP10.81□□□□□ -0.68
LINC00342-202ENST00000448494 MBLAC2Q68D91 279 aa10.81□□□□□ -0.68
LINC00342-202ENST00000448494 KIAA1324Q6UXG2 1013 aaKnown RBP10.81□□□□□ -0.68
LINC00342-202ENST00000448494 KRT25Q7Z3Z0 450 aa10.81□□□□□ -0.68
LINC00342-202ENST00000448494 SLC26A11Q86WA9 606 aa10.81□□□□□ -0.68
LINC00342-202ENST00000448494 OR4M2Q8NGB6 313 aa10.81□□□□□ -0.68
LINC00342-202ENST00000448494 SLC7A14Q8TBB6 771 aa10.81□□□□□ -0.68
LINC00342-202ENST00000448494 BLOC1S5Q8TDH9 187 aa10.81□□□□□ -0.68
LINC00342-202ENST00000448494 USP13Q92995 863 aaPredicted RBP10.81□□□□□ -0.68
LINC00342-202ENST00000448494 NXNL1Q96CM4 212 aa10.81□□□□□ -0.68
LINC00342-202ENST00000448494 SLC47A1Q96FL8 570 aa10.81□□□□□ -0.68
LINC00342-202ENST00000448494 FBXL20Q96IG2 436 aa10.81□□□□□ -0.68
LINC00342-202ENST00000448494 SCYL1Q96KG9 808 aa10.81□□□□□ -0.68
LINC00342-202ENST00000448494 PIP5K1AQ99755 562 aa10.81□□□□□ -0.68
LINC00342-202ENST00000448494 APOL5Q9BWW9 433 aa10.81□□□□□ -0.68
LINC00342-202ENST00000448494 RC3H2Q9HBD1 1191 aaKnown RBP10.81□□□□□ -0.68
LINC00342-202ENST00000448494 POLR3BQ9NW08 1133 aaPredicted RBP10.81□□□□□ -0.68
LINC00342-202ENST00000448494 DRG1Q9Y295 367 aaKnown RBP10.81□□□□□ -0.68
LINC00342-202ENST00000448494 FARP1Q9Y4F1 1045 aaPredicted RBP10.81□□□□□ -0.68
LINC00342-202ENST00000448494 CYP3A7-CYP3A51PA0A087WV96 503 aa10.81□□□□□ -0.68
LINC00342-202ENST00000448494 A8MUA0 341 aa10.81□□□□□ -0.68
LINC00342-202ENST00000448494 CFLARO15519 480 aa10.81□□□□□ -0.68
LINC00342-202ENST00000448494 LIASO43766 372 aa10.81□□□□□ -0.68
LINC00342-202ENST00000448494 TOM1L1O75674 476 aa10.81□□□□□ -0.68
LINC00342-202ENST00000448494 SNX4O95219 450 aa10.81□□□□□ -0.68
LINC00342-202ENST00000448494 PLA2G4BP0C869 781 aa10.81□□□□□ -0.68
LINC00342-202ENST00000448494 CYP3A7P24462 503 aa10.81□□□□□ -0.68
LINC00342-202ENST00000448494 HMGCLP35914 325 aa10.81□□□□□ -0.68
LINC00342-202ENST00000448494 TPMTP51580 245 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms