RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 FEM1CQ96JP0 617 aa17.55■□□□□ 0.4
SGCE-206ENST00000445866 TBL1YQ9BQ87 522 aa17.55■□□□□ 0.4
SGCE-206ENST00000445866 TDRD1Q9BXT4 1180 aaKnown RBP17.55■□□□□ 0.4
SGCE-206ENST00000445866 EPHX3Q9H6B9 360 aa17.55■□□□□ 0.4
SGCE-206ENST00000445866 C16orf96A6NNT2 1141 aa17.55■□□□□ 0.4
SGCE-206ENST00000445866 MID1O15344 667 aa17.55■□□□□ 0.4
SGCE-206ENST00000445866 ALDH1A2O94788 518 aa17.55■□□□□ 0.4
SGCE-206ENST00000445866 SEC31AO94979 1220 aaKnown RBP17.55■□□□□ 0.4
SGCE-206ENST00000445866 NDST3O95803 873 aa17.55■□□□□ 0.4
SGCE-206ENST00000445866 ADH1BP00325 375 aa17.55■□□□□ 0.4
SGCE-206ENST00000445866 DNTTP04053 509 aa17.55■□□□□ 0.4
SGCE-206ENST00000445866 ADRA1AP35348 466 aa17.55■□□□□ 0.4
SGCE-206ENST00000445866 CXCL12P48061 93 aa17.55■□□□□ 0.4
SGCE-206ENST00000445866 METAP1P53582 386 aa17.55■□□□□ 0.4
SGCE-206ENST00000445866 ITGA8P53708 1063 aa17.55■□□□□ 0.4
SGCE-206ENST00000445866 POLR2LP62875 67 aaKnown RBP17.55■□□□□ 0.4
SGCE-206ENST00000445866 KCNJ11Q14654 390 aa17.55■□□□□ 0.4
SGCE-206ENST00000445866 BRAT1Q6PJG6 821 aa17.55■□□□□ 0.4
SGCE-206ENST00000445866 RANBP10Q6VN20 620 aa17.55■□□□□ 0.4
SGCE-206ENST00000445866 PPP1R21Q6ZMI0 780 aa17.55■□□□□ 0.4
SGCE-206ENST00000445866 LINC00523Q86TU6 105 aa17.55■□□□□ 0.4
SGCE-206ENST00000445866 NAT8LQ8N9F0 302 aa17.55■□□□□ 0.4
SGCE-206ENST00000445866 HCAR2Q8TDS4 363 aa17.55■□□□□ 0.4
SGCE-206ENST00000445866 GANCQ8TET4 914 aa17.55■□□□□ 0.4
SGCE-206ENST00000445866 PRCCQ92733 491 aaPredicted RBP17.55■□□□□ 0.4
SGCE-206ENST00000445866 PPP1R16AQ96I34 528 aa17.55■□□□□ 0.4
SGCE-206ENST00000445866 MRGPRX1Q96LB2 322 aa17.55■□□□□ 0.4
SGCE-206ENST00000445866 DLGAP2Q9P1A6 1054 aa17.55■□□□□ 0.4
SGCE-206ENST00000445866 WHRNQ9P202 907 aa17.55■□□□□ 0.4
SGCE-206ENST00000445866 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.55■□□□□ 0.4
SGCE-206ENST00000445866 V9GYY5 206 aaPredicted RBP17.55■□□□□ 0.4
SGCE-206ENST00000445866 TTC28Q96AY4 2481 aa17.54■□□□□ 0.4
SGCE-206ENST00000445866 A0A1W2PQ67 120 aa17.54■□□□□ 0.4
SGCE-206ENST00000445866 GOLGA8MH3BSY2 632 aa17.54■□□□□ 0.4
SGCE-206ENST00000445866 TNFRSF10AO00220 468 aa17.54■□□□□ 0.4
SGCE-206ENST00000445866 NDC80O14777 642 aa17.54■□□□□ 0.4
SGCE-206ENST00000445866 FZD6O60353 706 aa17.54■□□□□ 0.4
SGCE-206ENST00000445866 SUN1O94901 812 aa17.54■□□□□ 0.4
SGCE-206ENST00000445866 ACADMP11310 421 aa17.54■□□□□ 0.4
SGCE-206ENST00000445866 TIMP2P16035 220 aa17.54■□□□□ 0.4
SGCE-206ENST00000445866 TPSB2P20231 275 aa17.54■□□□□ 0.4
SGCE-206ENST00000445866 C5AR1P21730 350 aa17.54■□□□□ 0.4
SGCE-206ENST00000445866 XPAP23025 273 aaPredicted RBP17.54■□□□□ 0.4
SGCE-206ENST00000445866 GRIA1P42261 906 aa17.54■□□□□ 0.4
SGCE-206ENST00000445866 MAGEA6P43360 314 aa17.54■□□□□ 0.4
SGCE-206ENST00000445866 PLTPP55058 493 aa17.54■□□□□ 0.4
SGCE-206ENST00000445866 MORF4L2Q15014 288 aa17.54■□□□□ 0.4
SGCE-206ENST00000445866 TPSAB1Q15661 275 aa17.54■□□□□ 0.4
SGCE-206ENST00000445866 NAPEPLDQ6IQ20 393 aa17.54■□□□□ 0.4
SGCE-206ENST00000445866 KIAA1324Q6UXG2 1013 aaKnown RBP17.54■□□□□ 0.4
SGCE-206ENST00000445866 IFT20Q8IY31 132 aa17.54■□□□□ 0.4
SGCE-206ENST00000445866 HDDC3Q8N4P3 179 aa17.54■□□□□ 0.4
SGCE-206ENST00000445866 DNAAF3Q8N9W5 541 aa17.54■□□□□ 0.4
SGCE-206ENST00000445866 LPCAT1Q8NF37 534 aa17.54■□□□□ 0.4
SGCE-206ENST00000445866 TRIB3Q96RU7 358 aa17.54■□□□□ 0.4
SGCE-206ENST00000445866 IER2Q9BTL4 223 aa17.54■□□□□ 0.4
SGCE-206ENST00000445866 EPC1Q9H2F5 836 aa17.54■□□□□ 0.4
SGCE-206ENST00000445866 EIF2B3Q9NR50 452 aaKnown RBP17.54■□□□□ 0.4
SGCE-206ENST00000445866 SPATA6Q9NWH7 488 aaPredicted RBP17.54■□□□□ 0.4
SGCE-206ENST00000445866 BCCIPQ9P287 314 aaKnown RBP eCLIP17.54■□□□□ 0.4
SGCE-206ENST00000445866 DKK3Q9UBP4 350 aa17.54■□□□□ 0.4
SGCE-206ENST00000445866 PHTF1Q9UMS5 762 aa17.54■□□□□ 0.4
SGCE-206ENST00000445866 BDP1A6H8Y1 2624 aa17.54■□□□□ 0.4
SGCE-206ENST00000445866 ANKRD66B4E2M5 251 aa17.53■□□□□ 0.4
SGCE-206ENST00000445866 PLK4O00444 970 aa17.53■□□□□ 0.4
SGCE-206ENST00000445866 NDUFV2P19404 249 aa17.53■□□□□ 0.4
SGCE-206ENST00000445866 CHRNA4P43681 627 aa17.53■□□□□ 0.4
SGCE-206ENST00000445866 RPL26P61254 145 aaKnown RBP17.53■□□□□ 0.4
SGCE-206ENST00000445866 ZBTB16Q05516 673 aa17.53■□□□□ 0.4
SGCE-206ENST00000445866 GALNT3Q14435 633 aa17.53■□□□□ 0.4
SGCE-206ENST00000445866 SLC1A5Q15758 541 aa17.53■□□□□ 0.4
SGCE-206ENST00000445866 SIRPB2Q5JXA9 342 aa17.53■□□□□ 0.4
SGCE-206ENST00000445866 HIBCHQ6NVY1 386 aaPredicted RBP17.53■□□□□ 0.4
SGCE-206ENST00000445866 FBXL19Q6PCT2 694 aa17.53■□□□□ 0.4
SGCE-206ENST00000445866 NDUFAF2Q8N183 169 aa17.53■□□□□ 0.4
SGCE-206ENST00000445866 OR52K1Q8NGK4 314 aa17.53■□□□□ 0.4
SGCE-206ENST00000445866 PIH1D2Q8WWB5 315 aa17.53■□□□□ 0.4
SGCE-206ENST00000445866 SEC14L1Q92503 715 aa17.53■□□□□ 0.4
SGCE-206ENST00000445866 ARRDC3Q96B67 414 aa17.53■□□□□ 0.4
SGCE-206ENST00000445866 ECHDC3Q96DC8 303 aa17.53■□□□□ 0.4
SGCE-206ENST00000445866 HHIPQ96QV1 700 aa17.53■□□□□ 0.4
SGCE-206ENST00000445866 OMDQ99983 421 aa17.53■□□□□ 0.4
SGCE-206ENST00000445866 FAM114A2Q9NRY5 505 aa17.53■□□□□ 0.4
SGCE-206ENST00000445866 PIH1D1Q9NWS0 290 aaKnown RBP17.53■□□□□ 0.4
SGCE-206ENST00000445866 GRHL1Q9NZI5 618 aa17.53■□□□□ 0.4
SGCE-206ENST00000445866 RPL26L1Q9UNX3 145 aaKnown RBP17.53■□□□□ 0.4
SGCE-206ENST00000445866 COL4A2P08572 1712 aa17.53■□□□□ 0.4
SGCE-206ENST00000445866 CPP00450 1065 aa17.52■□□□□ 0.4
SGCE-206ENST00000445866 TPH1P17752 444 aa17.52■□□□□ 0.4
SGCE-206ENST00000445866 GABRG2P18507 467 aa17.52■□□□□ 0.4
SGCE-206ENST00000445866 ITGB7P26010 798 aa17.52■□□□□ 0.4
SGCE-206ENST00000445866 SFSWAPQ12872 951 aaKnown RBP17.52■□□□□ 0.4
SGCE-206ENST00000445866 UGP2Q16851 508 aa17.52■□□□□ 0.4
SGCE-206ENST00000445866 ERCC6LQ2NKX8 1250 aa17.52■□□□□ 0.4
SGCE-206ENST00000445866 DENND5AQ6IQ26 1287 aa17.52■□□□□ 0.4
SGCE-206ENST00000445866 ANO7Q6IWH7 933 aa17.52■□□□□ 0.4
SGCE-206ENST00000445866 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.52■□□□□ 0.4
SGCE-206ENST00000445866 MAMSTRQ6ZN01 415 aa17.52■□□□□ 0.4
SGCE-206ENST00000445866 ERN2Q76MJ5 926 aaKnown RBP17.52■□□□□ 0.4
SGCE-206ENST00000445866 HOOK3Q86VS8 718 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms