RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 LRP4O75096 1905 aa13.96□□□□□ -0.18
PTPRE-203ENST00000442830 TSPAN11A1L157 253 aa13.95□□□□□ -0.18
PTPRE-203ENST00000442830 CDRT15L2A8MXV6 281 aa13.95□□□□□ -0.18
PTPRE-203ENST00000442830 MUSKO15146 869 aa13.95□□□□□ -0.18
PTPRE-203ENST00000442830 C1QL1O75973 258 aa13.95□□□□□ -0.18
PTPRE-203ENST00000442830 ITGA2BP08514 1039 aa13.95□□□□□ -0.18
PTPRE-203ENST00000442830 CTSEP14091 401 aa13.95□□□□□ -0.18
PTPRE-203ENST00000442830 ZNF143P52747 638 aaPredicted RBP13.95□□□□□ -0.18
PTPRE-203ENST00000442830 HK3P52790 923 aa13.95□□□□□ -0.18
PTPRE-203ENST00000442830 ADKP55263 362 aaKnown RBP13.95□□□□□ -0.18
PTPRE-203ENST00000442830 SKOR1P84550 965 aa13.95□□□□□ -0.18
PTPRE-203ENST00000442830 SERINC3Q13530 473 aa13.95□□□□□ -0.18
PTPRE-203ENST00000442830 CLEC16AQ2KHT3 1053 aa13.95□□□□□ -0.18
PTPRE-203ENST00000442830 KLHL40Q2TBA0 621 aa13.95□□□□□ -0.18
PTPRE-203ENST00000442830 ATXN7L2Q5T6C5 722 aaPredicted RBP13.95□□□□□ -0.18
PTPRE-203ENST00000442830 DNAJC24Q6P3W2 148 aa13.95□□□□□ -0.18
PTPRE-203ENST00000442830 CLEC14AQ86T13 490 aa13.95□□□□□ -0.18
PTPRE-203ENST00000442830 SLC35F3Q8IY50 421 aa13.95□□□□□ -0.18
PTPRE-203ENST00000442830 UMODL1-AS1Q8N2C9 162 aa13.95□□□□□ -0.18
PTPRE-203ENST00000442830 ZNF843Q8N446 348 aa13.95□□□□□ -0.18
PTPRE-203ENST00000442830 CCDC185Q8N715 623 aa13.95□□□□□ -0.18
PTPRE-203ENST00000442830 TP53I13Q8NBR0 393 aaPredicted RBP13.95□□□□□ -0.18
PTPRE-203ENST00000442830 NEK11Q8NG66 645 aa13.95□□□□□ -0.18
PTPRE-203ENST00000442830 JOSD2Q8TAC2 188 aa13.95□□□□□ -0.18
PTPRE-203ENST00000442830 SLC30A5Q8TAD4 765 aa13.95□□□□□ -0.18
PTPRE-203ENST00000442830 NAF1Q96HR8 494 aaKnown RBP13.95□□□□□ -0.18
PTPRE-203ENST00000442830 FAM207AQ9NSI2 230 aaPredicted RBP13.95□□□□□ -0.18
PTPRE-203ENST00000442830 TAB2Q9NYJ8 693 aa13.95□□□□□ -0.18
PTPRE-203ENST00000442830 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.95□□□□□ -0.18
PTPRE-203ENST00000442830 UBA2Q9UBT2 640 aaPredicted RBP13.95□□□□□ -0.18
PTPRE-203ENST00000442830 SSUH2Q9Y2M2 353 aa13.95□□□□□ -0.18
PTPRE-203ENST00000442830 ATMQ13315 3056 aa13.95□□□□□ -0.18
PTPRE-203ENST00000442830 UNC13CQ8NB66 2214 aa13.94□□□□□ -0.18
PTPRE-203ENST00000442830 RASA4BC9J798 803 aa13.94□□□□□ -0.18
PTPRE-203ENST00000442830 FAM72CH0Y354 149 aa13.94□□□□□ -0.18
PTPRE-203ENST00000442830 RASA4O43374 803 aa13.94□□□□□ -0.18
PTPRE-203ENST00000442830 MMP20O60882 483 aa13.94□□□□□ -0.18
PTPRE-203ENST00000442830 CHRNB2P17787 502 aa13.94□□□□□ -0.18
PTPRE-203ENST00000442830 KELP23276 732 aa13.94□□□□□ -0.18
PTPRE-203ENST00000442830 NFKBIAP25963 317 aa13.94□□□□□ -0.18
PTPRE-203ENST00000442830 GKP32189 559 aa13.94□□□□□ -0.18
PTPRE-203ENST00000442830 RFC1P35251 1148 aaPredicted RBP13.94□□□□□ -0.18
PTPRE-203ENST00000442830 CSNK1DP48730 415 aa13.94□□□□□ -0.18
PTPRE-203ENST00000442830 ZNF135P52742 658 aaPredicted RBP13.94□□□□□ -0.18
PTPRE-203ENST00000442830 NDST2P52849 883 aa13.94□□□□□ -0.18
PTPRE-203ENST00000442830 MTM1Q13496 603 aa13.94□□□□□ -0.18
PTPRE-203ENST00000442830 NFATC4Q14934 902 aa13.94□□□□□ -0.18
PTPRE-203ENST00000442830 IRF4Q15306 451 aa13.94□□□□□ -0.18
PTPRE-203ENST00000442830 KRT31Q15323 416 aa13.94□□□□□ -0.18
PTPRE-203ENST00000442830 ARHGAP40Q5TG30 622 aa13.94□□□□□ -0.18
PTPRE-203ENST00000442830 FAM72AQ5TYM5 149 aa13.94□□□□□ -0.18
PTPRE-203ENST00000442830 CDKAL1Q5VV42 579 aa13.94□□□□□ -0.18
PTPRE-203ENST00000442830 FAM72DQ6L9T8 149 aa13.94□□□□□ -0.18
PTPRE-203ENST00000442830 WDR59Q6PJI9 974 aa13.94□□□□□ -0.18
PTPRE-203ENST00000442830 XKR5Q6UX68 686 aa13.94□□□□□ -0.18
PTPRE-203ENST00000442830 FAM72BQ86X60 149 aa13.94□□□□□ -0.18
PTPRE-203ENST00000442830 RBFAQ8N0V3 343 aa13.94□□□□□ -0.18
PTPRE-203ENST00000442830 TMEM159Q96B96 161 aa13.94□□□□□ -0.18
PTPRE-203ENST00000442830 ATXN7L3BQ96GX2 97 aa13.94□□□□□ -0.18
PTPRE-203ENST00000442830 TMEM74Q96NL1 305 aa13.94□□□□□ -0.18
PTPRE-203ENST00000442830 CCDC3Q9BQI4 270 aa13.94□□□□□ -0.18
PTPRE-203ENST00000442830 CNPY3Q9BT09 278 aa13.94□□□□□ -0.18
PTPRE-203ENST00000442830 EDEM3Q9BZQ6 932 aa13.94□□□□□ -0.18
PTPRE-203ENST00000442830 VPS16Q9H269 839 aa13.94□□□□□ -0.18
PTPRE-203ENST00000442830 NLRC4Q9NPP4 1024 aa13.94□□□□□ -0.18
PTPRE-203ENST00000442830 KCTD5Q9NXV2 234 aa13.94□□□□□ -0.18
PTPRE-203ENST00000442830 GGT7Q9UJ14 662 aa13.94□□□□□ -0.18
PTPRE-203ENST00000442830 ACTL7AQ9Y615 435 aa13.94□□□□□ -0.18
PTPRE-203ENST00000442830 ZNF462Q96JM2 2506 aa13.94□□□□□ -0.18
PTPRE-203ENST00000442830 ARHGAP42A6NI28 874 aa13.93□□□□□ -0.18
PTPRE-203ENST00000442830 NTN3O00634 580 aaPredicted RBP13.93□□□□□ -0.18
PTPRE-203ENST00000442830 YY2O15391 372 aa13.93□□□□□ -0.18
PTPRE-203ENST00000442830 GCATO75600 419 aa13.93□□□□□ -0.18
PTPRE-203ENST00000442830 PRB1P04280 392 aa13.93□□□□□ -0.18
PTPRE-203ENST00000442830 MYF5P13349 255 aa13.93□□□□□ -0.18
PTPRE-203ENST00000442830 PLA2G2AP14555 144 aa13.93□□□□□ -0.18
PTPRE-203ENST00000442830 TIMP2P16035 220 aa13.93□□□□□ -0.18
PTPRE-203ENST00000442830 TSHRP16473 764 aa13.93□□□□□ -0.18
PTPRE-203ENST00000442830 SERPINA4P29622 427 aa13.93□□□□□ -0.18
PTPRE-203ENST00000442830 POLR2LP62875 67 aaKnown RBP13.93□□□□□ -0.18
PTPRE-203ENST00000442830 PTP4A2Q12974 167 aa13.93□□□□□ -0.18
PTPRE-203ENST00000442830 RFTN1Q14699 578 aaPredicted RBP13.93□□□□□ -0.18
PTPRE-203ENST00000442830 UGP2Q16851 508 aa13.93□□□□□ -0.18
PTPRE-203ENST00000442830 SCYL2Q6P3W7 929 aa13.93□□□□□ -0.18
PTPRE-203ENST00000442830 DCUN1D2Q6PH85 259 aa13.93□□□□□ -0.18
PTPRE-203ENST00000442830 MON1BQ7L1V2 547 aa13.93□□□□□ -0.18
PTPRE-203ENST00000442830 HMCESQ96FZ2 354 aa13.93□□□□□ -0.18
PTPRE-203ENST00000442830 PCMTD1Q96MG8 357 aaPredicted RBP13.93□□□□□ -0.18
PTPRE-203ENST00000442830 GFM1Q96RP9 751 aaKnown RBP13.93□□□□□ -0.18
PTPRE-203ENST00000442830 SUV39H2Q9H5I1 410 aa13.93□□□□□ -0.18
PTPRE-203ENST00000442830 ATP13A3Q9H7F0 1226 aa13.93□□□□□ -0.18
PTPRE-203ENST00000442830 SEPT11Q9NVA2 429 aaKnown RBP13.93□□□□□ -0.18
PTPRE-203ENST00000442830 KLQ9UEF7 1012 aa13.93□□□□□ -0.18
PTPRE-203ENST00000442830 FZD10Q9ULW2 581 aa13.93□□□□□ -0.18
PTPRE-203ENST00000442830 PCDHGA7Q9Y5G6 932 aa13.93□□□□□ -0.18
PTPRE-203ENST00000442830 DGKBQ9Y6T7 804 aa13.93□□□□□ -0.18
PTPRE-203ENST00000442830 AHCTF1Q8WYP5 2266 aa13.93□□□□□ -0.18
PTPRE-203ENST00000442830 FLNBO75369 2602 aaKnown RBP13.93□□□□□ -0.18
PTPRE-203ENST00000442830 CFAP46Q8IYW2 2715 aa13.92□□□□□ -0.18
PTPRE-203ENST00000442830 A0A1W2PQ67 120 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms