RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 ZACNQ401N2 412 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 ZCWPW2Q504Y3 356 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 C3orf38Q5JPI3 329 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 CCDC122Q5T0U0 273 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 PDXDC1Q6P996 788 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 SERPINA13PQ6UXR4 307 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 RRAGAQ7L523 313 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 CACNA2D4Q7Z3S7 1137 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 MAVSQ7Z434 540 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 KIAA1328Q86T90 577 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 CTAGE6Q86UF2 777 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 CTAGE4Q8IX94 777 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 ZC3H3Q8IXZ2 948 aaKnown RBP3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 KRT222Q8N1A0 295 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 GALNT4Q8N4A0 578 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 PNLDC1Q8NA58 520 aaKnown RBP3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 ATP11CQ8NB49 1132 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 AGBL3Q8NEM8 1001 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 ETNPPLQ8TBG4 499 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 ACER1Q8TDN7 264 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 SMCR8Q8TEV9 937 aaPredicted RBP3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 UBE2Q2Q8WVN8 375 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 SOCS4Q8WXH5 440 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 SYN2Q92777 582 aaPredicted RBP3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 GLG1Q92896 1179 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 JAKMIP2Q96AA8 810 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 SKA1Q96BD8 255 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 TRIM43Q96BQ3 446 aaPredicted RBP3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 EEF2KMTQ96G04 330 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 CCDC42Q96M95 316 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 PPM1MQ96MI6 270 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 FCRL4Q96PJ5 515 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 P2RX7Q99572 595 aaKnown RBP3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 GDF15Q99988 308 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 FAM118BQ9BPY3 351 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 EIF2AK1Q9BQI3 630 aaKnown RBP3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 PARD6BQ9BYG5 372 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 TSGA10Q9BZW7 698 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 RANBP17Q9H2T7 1088 aaKnown RBP3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 VCPKMTQ9H867 229 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 SMURF2Q9HAU4 748 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 VEZTQ9HBM0 779 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 TUFT1Q9NNX1 390 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 SERHLQ9NQF3 203 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 ITM2CQ9NQX7 267 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 TBC1D7Q9P0N9 293 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 FEM1BQ9UK73 627 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 NDRG4Q9ULP0 352 aaKnown RBP3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 MAFFQ9ULX9 164 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 MYO6Q9UM54 1294 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 MAGED2Q9UNF1 606 aaPredicted RBP3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 FOCADQ5VW36 1801 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 BRWD3Q6RI45 1802 aa3.65□□□□□ -1.83
HMGB3P11-201ENST00000440127 CDK5RAP2Q96SN8 1893 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 CNTNAP1P78357 1384 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 IGLV3-22A0A075B6J6 115 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 LRRC53A6NM62 1247 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 CLCA1A8K7I4 914 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 BTBD19C9JJ37 291 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 J3KRW8 73 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 SYT5O00445 386 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 DCLK1O15075 740 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 NPC1O15118 1278 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 TBCAO75347 108 aaKnown RBP3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 TACC1O75410 805 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 ERLIN1O75477 346 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 PSMD10O75832 226 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 SLITRK3O94933 977 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 LCA5LO95447 670 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 LATS1O95835 1130 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 SERPING1P05155 500 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 MYCLP12524 364 aaPredicted RBP3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 JUPP14923 745 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 GAP43P17677 238 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 KCNA3P22001 575 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 MUTP22033 750 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 MCM3P25205 808 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 PRKAR1BP31321 381 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 PRELPP51888 382 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 GABPB1Q06547 395 aaPredicted RBP3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 CKAP4Q07065 602 aaKnown RBP3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 FOXO1Q12778 655 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 PPP2R5CQ13362 524 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 TNIP1Q15025 636 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 KNOP1Q1ED39 458 aaKnown RBP3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 INSCQ1MX18 579 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 SLC9C1Q4G0N8 1177 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 CEP55Q53EZ4 464 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 KIAA1755Q5JYT7 1200 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 CERCAMQ5T4B2 595 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 SFMBT2Q5VUG0 894 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 ZNF626Q68DY1 528 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 ZNF425Q6IV72 752 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 LIN54Q6MZP7 749 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 RINT1Q6NUQ1 792 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 MIS18BP1Q6P0N0 1132 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 ZNF782Q6ZMW2 699 aaPredicted RBP3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 Q6ZWC4 215 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 TRAPPC11Q7Z392 1133 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 YTHDF3Q7Z739 585 aaKnown RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms