RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 ACOT8O14734 319 aa9.12□□□□□ -0.95
COPB1-202ENST00000439561 B4GAT1O43505 415 aa9.12□□□□□ -0.95
COPB1-202ENST00000439561 LDLRP01130 860 aa9.12□□□□□ -0.95
COPB1-202ENST00000439561 IQCF3P0C7M6 154 aa9.12□□□□□ -0.95
COPB1-202ENST00000439561 ATP6V1B2P21281 511 aa9.12□□□□□ -0.95
COPB1-202ENST00000439561 ALDH4A1P30038 563 aa9.12□□□□□ -0.95
COPB1-202ENST00000439561 RELAQ04206 551 aa9.12□□□□□ -0.95
COPB1-202ENST00000439561 POLD3Q15054 466 aaPredicted RBP9.12□□□□□ -0.95
COPB1-202ENST00000439561 C6orf10Q5SRN2 563 aa9.12□□□□□ -0.95
COPB1-202ENST00000439561 TREML2Q5T2D2 321 aa9.12□□□□□ -0.95
COPB1-202ENST00000439561 SYPL2Q5VXT5 272 aa9.12□□□□□ -0.95
COPB1-202ENST00000439561 HPS1Q92902 700 aa9.12□□□□□ -0.95
COPB1-202ENST00000439561 ZNF597Q96LX8 424 aa9.12□□□□□ -0.95
COPB1-202ENST00000439561 NSMCE4AQ9NXX6 385 aa9.12□□□□□ -0.95
COPB1-202ENST00000439561 MTF2Q9Y483 593 aaPredicted RBP9.12□□□□□ -0.95
COPB1-202ENST00000439561 PTGDR2Q9Y5Y4 395 aa9.12□□□□□ -0.95
COPB1-202ENST00000439561 ERI2A8K979 691 aaKnown RBP9.11□□□□□ -0.95
COPB1-202ENST00000439561 M0R3G1 203 aa9.11□□□□□ -0.95
COPB1-202ENST00000439561 TOMM70O94826 608 aa9.11□□□□□ -0.95
COPB1-202ENST00000439561 CPB1P15086 417 aa9.11□□□□□ -0.95
COPB1-202ENST00000439561 PORP16435 677 aaPredicted RBP9.11□□□□□ -0.95
COPB1-202ENST00000439561 JAK1P23458 1154 aa9.11□□□□□ -0.95
COPB1-202ENST00000439561 HALP42357 657 aa9.11□□□□□ -0.95
COPB1-202ENST00000439561 ACADSBP45954 432 aa9.11□□□□□ -0.95
COPB1-202ENST00000439561 NPY2RP49146 381 aa9.11□□□□□ -0.95
COPB1-202ENST00000439561 CXCR3P49682 368 aa9.11□□□□□ -0.95
COPB1-202ENST00000439561 KCNK10P57789 538 aa9.11□□□□□ -0.95
COPB1-202ENST00000439561 CACNB2Q08289 660 aaPredicted RBP9.11□□□□□ -0.95
COPB1-202ENST00000439561 PPP1R8Q12972 351 aaKnown RBP9.11□□□□□ -0.95
COPB1-202ENST00000439561 SLC26A9Q7LBE3 791 aa9.11□□□□□ -0.95
COPB1-202ENST00000439561 CEP97Q8IW35 865 aa9.11□□□□□ -0.95
COPB1-202ENST00000439561 SLC35F5Q8WV83 523 aa9.11□□□□□ -0.95
COPB1-202ENST00000439561 HDAC10Q969S8 669 aa9.11□□□□□ -0.95
COPB1-202ENST00000439561 NCLNQ969V3 563 aa9.11□□□□□ -0.95
COPB1-202ENST00000439561 PDZD7Q9H5P4 517 aa9.11□□□□□ -0.95
COPB1-202ENST00000439561 WDCPQ9H6R7 721 aa9.11□□□□□ -0.95
COPB1-202ENST00000439561 TBC1D13Q9NVG8 400 aa9.11□□□□□ -0.95
COPB1-202ENST00000439561 SLC2A6Q9UGQ3 507 aa9.11□□□□□ -0.95
COPB1-202ENST00000439561 FBXO5Q9UKT4 447 aa9.11□□□□□ -0.95
COPB1-202ENST00000439561 ZNF232Q9UNY5 417 aa9.11□□□□□ -0.95
COPB1-202ENST00000439561 ST14Q9Y5Y6 855 aa9.11□□□□□ -0.95
COPB1-202ENST00000439561 NRAPQ86VF7 1730 aa9.11□□□□□ -0.95
COPB1-202ENST00000439561 MAGEB16A2A368 324 aa9.11□□□□□ -0.95
COPB1-202ENST00000439561 FUOMA2VDF0 154 aa9.11□□□□□ -0.95
COPB1-202ENST00000439561 FAM72CH0Y354 149 aa9.11□□□□□ -0.95
COPB1-202ENST00000439561 DPYSL4O14531 572 aa9.11□□□□□ -0.95
COPB1-202ENST00000439561 GAS2O43903 313 aaKnown RBP9.11□□□□□ -0.95
COPB1-202ENST00000439561 ARIH2O95376 493 aa9.11□□□□□ -0.95
COPB1-202ENST00000439561 LINC00032P0C843 101 aa9.11□□□□□ -0.95
COPB1-202ENST00000439561 SLC35E2BP0CK96 405 aa9.11□□□□□ -0.95
COPB1-202ENST00000439561 PTPN9P43378 593 aa9.11□□□□□ -0.95
COPB1-202ENST00000439561 DGCR6Q14129 220 aa9.11□□□□□ -0.95
COPB1-202ENST00000439561 TARBP2Q15633 366 aaKnown RBP9.11□□□□□ -0.95
COPB1-202ENST00000439561 CYP2A13Q16696 494 aa9.11□□□□□ -0.95
COPB1-202ENST00000439561 FAM72AQ5TYM5 149 aa9.11□□□□□ -0.95
COPB1-202ENST00000439561 FAM72DQ6L9T8 149 aa9.11□□□□□ -0.95
COPB1-202ENST00000439561 TMEM110Q86TL2 294 aa9.11□□□□□ -0.95
COPB1-202ENST00000439561 ADCK1Q86TW2 530 aa9.11□□□□□ -0.95
COPB1-202ENST00000439561 SAPCD2Q86UD0 394 aa9.11□□□□□ -0.95
COPB1-202ENST00000439561 FAM72BQ86X60 149 aa9.11□□□□□ -0.95
COPB1-202ENST00000439561 DCBLD1Q8N8Z6 715 aa9.11□□□□□ -0.95
COPB1-202ENST00000439561 REPS2Q8NFH8 660 aa9.11□□□□□ -0.95
COPB1-202ENST00000439561 RDH11Q8TC12 318 aa9.11□□□□□ -0.95
COPB1-202ENST00000439561 DQX1Q8TE96 717 aaKnown RBP9.11□□□□□ -0.95
COPB1-202ENST00000439561 GLMNQ92990 594 aa9.11□□□□□ -0.95
COPB1-202ENST00000439561 TAMM41Q96BW9 452 aa9.11□□□□□ -0.95
COPB1-202ENST00000439561 FAR2Q96K12 515 aa9.11□□□□□ -0.95
COPB1-202ENST00000439561 TNIP3Q96KP6 325 aa9.11□□□□□ -0.95
COPB1-202ENST00000439561 MRPL57Q9BQC6 102 aaKnown RBP9.11□□□□□ -0.95
COPB1-202ENST00000439561 FZD8Q9H461 694 aa9.11□□□□□ -0.95
COPB1-202ENST00000439561 MTMR10Q9NXD2 777 aa9.11□□□□□ -0.95
COPB1-202ENST00000439561 FZD10Q9ULW2 581 aa9.11□□□□□ -0.95
COPB1-202ENST00000439561 ZCWPW2A0A1B0GU75 182 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 H3BMM5 538 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 H3BMQ9 156 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 HGFP14210 728 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 MAGP20916 626 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 CHRNA4P43681 627 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 IREB2P48200 963 aaKnown RBP9.1□□□□□ -0.95
COPB1-202ENST00000439561 BCAP31P51572 246 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 PRKAA2P54646 552 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 C1QTNF8P60827 252 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 TXNL4AP83876 142 aaKnown RBP9.1□□□□□ -0.95
COPB1-202ENST00000439561 EN1Q05925 392 aaPredicted RBP9.1□□□□□ -0.95
COPB1-202ENST00000439561 PFKFB4Q16877 469 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 ZNF829Q3KNS6 432 aaPredicted RBP9.1□□□□□ -0.95
COPB1-202ENST00000439561 SLC25A52Q3SY17 297 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 NOMO2Q5JPE7 1267 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 RBM20Q5T481 1227 aaKnown RBP9.1□□□□□ -0.95
COPB1-202ENST00000439561 NEPROQ6NW34 567 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 BORAQ6PGQ7 559 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 CARM1Q86X55 608 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 ZDHHC17Q8IUH5 632 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 SNX29P2Q8IUI4 249 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 TMEM126BQ8IUX1 230 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 KDM1BQ8NB78 822 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 FLAD1Q8NFF5 587 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 VPS33AQ96AX1 596 aa9.1□□□□□ -0.95
COPB1-202ENST00000439561 PABPC5Q96DU9 382 aaKnown RBP9.1□□□□□ -0.95
COPB1-202ENST00000439561 COG8Q96MW5 612 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms