RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 TRIM38O00635 465 aa16.54■□□□□ 0.24
CLCNKA-203ENST00000439316 TFAP2AP05549 437 aa16.54■□□□□ 0.24
CLCNKA-203ENST00000439316 PSMD8P48556 350 aa16.54■□□□□ 0.24
CLCNKA-203ENST00000439316 KPNA2P52292 529 aaKnown RBP16.54■□□□□ 0.24
CLCNKA-203ENST00000439316 TAS2R39P59534 338 aa16.54■□□□□ 0.24
CLCNKA-203ENST00000439316 POTEHQ6S545 545 aa16.54■□□□□ 0.24
CLCNKA-203ENST00000439316 CHSY3Q70JA7 882 aa16.54■□□□□ 0.24
CLCNKA-203ENST00000439316 ATPAF2Q8N5M1 289 aa16.54■□□□□ 0.24
CLCNKA-203ENST00000439316 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.54■□□□□ 0.24
CLCNKA-203ENST00000439316 TMEM102Q8N9M5 508 aaPredicted RBP16.54■□□□□ 0.24
CLCNKA-203ENST00000439316 CEP70Q8NHQ1 597 aa16.54■□□□□ 0.24
CLCNKA-203ENST00000439316 ELMO2Q96JJ3 720 aa16.54■□□□□ 0.24
CLCNKA-203ENST00000439316 OMDQ99983 421 aa16.54■□□□□ 0.24
CLCNKA-203ENST00000439316 TRPV6Q9H1D0 765 aa16.54■□□□□ 0.24
CLCNKA-203ENST00000439316 CSNK1G1Q9HCP0 422 aa16.54■□□□□ 0.24
CLCNKA-203ENST00000439316 STARD7Q9NQZ5 370 aa16.54■□□□□ 0.24
CLCNKA-203ENST00000439316 TREX1Q9NSU2 369 aa16.54■□□□□ 0.24
CLCNKA-203ENST00000439316 SLC2A6Q9UGQ3 507 aa16.54■□□□□ 0.24
CLCNKA-203ENST00000439316 DFFAO00273 331 aa16.53■□□□□ 0.24
CLCNKA-203ENST00000439316 ATP5F1P24539 256 aaPredicted RBP16.53■□□□□ 0.24
CLCNKA-203ENST00000439316 CYP2C18P33260 490 aa16.53■□□□□ 0.24
CLCNKA-203ENST00000439316 CD151P48509 253 aa16.53■□□□□ 0.24
CLCNKA-203ENST00000439316 MYBPC1Q00872 1141 aa16.53■□□□□ 0.24
CLCNKA-203ENST00000439316 CREB5Q02930 508 aa16.53■□□□□ 0.24
CLCNKA-203ENST00000439316 SULT2A1Q06520 285 aa16.53■□□□□ 0.24
CLCNKA-203ENST00000439316 PTK2BQ14289 1009 aa16.53■□□□□ 0.24
CLCNKA-203ENST00000439316 TRIM71Q2Q1W2 868 aaKnown RBP16.53■□□□□ 0.24
CLCNKA-203ENST00000439316 USP41Q3LFD5 358 aa16.53■□□□□ 0.24
CLCNKA-203ENST00000439316 KIAA0930Q6ICG6 404 aaPredicted RBP16.53■□□□□ 0.24
CLCNKA-203ENST00000439316 CNSTQ6PJW8 725 aa16.53■□□□□ 0.24
CLCNKA-203ENST00000439316 TRIM67Q6ZTA4 783 aa16.53■□□□□ 0.24
CLCNKA-203ENST00000439316 SPATA6LQ8N4H0 392 aa16.53■□□□□ 0.24
CLCNKA-203ENST00000439316 DQX1Q8TE96 717 aaKnown RBP16.53■□□□□ 0.24
CLCNKA-203ENST00000439316 HEXDCQ8WVB3 486 aa16.53■□□□□ 0.24
CLCNKA-203ENST00000439316 TMA16Q96EY4 203 aaKnown RBP16.53■□□□□ 0.24
CLCNKA-203ENST00000439316 ZFRQ96KR1 1074 aaKnown RBP16.53■□□□□ 0.24
CLCNKA-203ENST00000439316 MRPS26Q9BYN8 205 aaKnown RBP16.53■□□□□ 0.24
CLCNKA-203ENST00000439316 POMKQ9H5K3 350 aa16.53■□□□□ 0.24
CLCNKA-203ENST00000439316 IGSF5Q9NSI5 407 aa16.53■□□□□ 0.24
CLCNKA-203ENST00000439316 SLC38A7Q9NVC3 462 aa16.53■□□□□ 0.24
CLCNKA-203ENST00000439316 PCDHGB4Q9UN71 923 aa16.53■□□□□ 0.24
CLCNKA-203ENST00000439316 PCDHGB5Q9Y5G0 923 aa16.53■□□□□ 0.24
CLCNKA-203ENST00000439316 TIMM13Q9Y5L4 95 aaPredicted RBP16.53■□□□□ 0.24
CLCNKA-203ENST00000439316 GPR182O15218 404 aa16.53■□□□□ 0.24
CLCNKA-203ENST00000439316 TNFAIP8O95379 198 aa16.53■□□□□ 0.24
CLCNKA-203ENST00000439316 IGLV3-25P01717 112 aa16.53■□□□□ 0.24
CLCNKA-203ENST00000439316 CD52P31358 61 aa16.53■□□□□ 0.24
CLCNKA-203ENST00000439316 GEMP55040 296 aa16.53■□□□□ 0.24
CLCNKA-203ENST00000439316 POU4F1Q01851 419 aa16.53■□□□□ 0.24
CLCNKA-203ENST00000439316 RWDD4Q6NW29 188 aaKnown RBP16.53■□□□□ 0.24
CLCNKA-203ENST00000439316 GK5Q6ZS86 529 aa16.53■□□□□ 0.24
CLCNKA-203ENST00000439316 DGCR14Q96DF8 476 aaKnown RBP16.53■□□□□ 0.24
CLCNKA-203ENST00000439316 ASB9Q96DX5 294 aa16.53■□□□□ 0.24
CLCNKA-203ENST00000439316 FAR2Q96K12 515 aa16.53■□□□□ 0.24
CLCNKA-203ENST00000439316 NDNQ99608 321 aa16.53■□□□□ 0.24
CLCNKA-203ENST00000439316 RHOBTB2Q9BYZ6 727 aa16.53■□□□□ 0.24
CLCNKA-203ENST00000439316 SUDS3Q9H7L9 328 aaPredicted RBP16.53■□□□□ 0.24
CLCNKA-203ENST00000439316 MRGBPQ9NV56 204 aa16.53■□□□□ 0.24
CLCNKA-203ENST00000439316 SUCOQ9UBS9 1254 aaKnown RBP16.53■□□□□ 0.24
CLCNKA-203ENST00000439316 CNOT11Q9UKZ1 510 aaKnown RBP16.53■□□□□ 0.24
CLCNKA-203ENST00000439316 LZTS1Q9Y250 596 aa16.53■□□□□ 0.24
CLCNKA-203ENST00000439316 PCDHGA7Q9Y5G6 932 aa16.53■□□□□ 0.24
CLCNKA-203ENST00000439316 KLHL33A6NCF5 533 aa16.52■□□□□ 0.24
CLCNKA-203ENST00000439316 MEIS3P2A8K0S8 358 aa16.52■□□□□ 0.24
CLCNKA-203ENST00000439316 KCNU1A8MYU2 1149 aa16.52■□□□□ 0.24
CLCNKA-203ENST00000439316 MAFKO60675 156 aa16.52■□□□□ 0.24
CLCNKA-203ENST00000439316 CLPTM1O96005 669 aa16.52■□□□□ 0.24
CLCNKA-203ENST00000439316 C8BP07358 591 aa16.52■□□□□ 0.24
CLCNKA-203ENST00000439316 HOXC13P31276 330 aa16.52■□□□□ 0.24
CLCNKA-203ENST00000439316 PSME3P61289 254 aa16.52■□□□□ 0.24
CLCNKA-203ENST00000439316 CDKL1Q00532 357 aa16.52■□□□□ 0.24
CLCNKA-203ENST00000439316 TECRLQ5HYJ1 363 aa16.52■□□□□ 0.24
CLCNKA-203ENST00000439316 ZNF470Q6ECI4 717 aa16.52■□□□□ 0.24
CLCNKA-203ENST00000439316 SCML4Q8N228 414 aa16.52■□□□□ 0.24
CLCNKA-203ENST00000439316 HMGCLL1Q8TB92 370 aa16.52■□□□□ 0.24
CLCNKA-203ENST00000439316 MYLPFQ96A32 169 aa16.52■□□□□ 0.24
CLCNKA-203ENST00000439316 DTNBP1Q96EV8 351 aa16.52■□□□□ 0.24
CLCNKA-203ENST00000439316 PPP1R2P1Q96PQ5 205 aa16.52■□□□□ 0.24
CLCNKA-203ENST00000439316 MRPL1Q9BYD6 325 aaKnown RBP16.52■□□□□ 0.24
CLCNKA-203ENST00000439316 SLC2A11Q9BYW1 496 aa16.52■□□□□ 0.24
CLCNKA-203ENST00000439316 UNKQ9C0B0 810 aaKnown RBP16.52■□□□□ 0.24
CLCNKA-203ENST00000439316 ENTPD7Q9NQZ7 604 aa16.52■□□□□ 0.24
CLCNKA-203ENST00000439316 ARHGEF38Q9NXL2 777 aa16.52■□□□□ 0.24
CLCNKA-203ENST00000439316 GTSE1Q9NYZ3 720 aa16.52■□□□□ 0.24
CLCNKA-203ENST00000439316 FBXO5Q9UKT4 447 aa16.52■□□□□ 0.24
CLCNKA-203ENST00000439316 SARDHQ9UL12 918 aa16.52■□□□□ 0.24
CLCNKA-203ENST00000439316 PADI3Q9ULW8 664 aa16.52■□□□□ 0.24
CLCNKA-203ENST00000439316 A0A1B0GVG6 124 aa16.51■□□□□ 0.23
CLCNKA-203ENST00000439316 VILLO15195 856 aa16.51■□□□□ 0.23
CLCNKA-203ENST00000439316 MATN3O15232 486 aa16.51■□□□□ 0.23
CLCNKA-203ENST00000439316 RNASEH2AO75792 299 aaKnown RBP16.51■□□□□ 0.23
CLCNKA-203ENST00000439316 CPB1P15086 417 aa16.51■□□□□ 0.23
CLCNKA-203ENST00000439316 PAMP19021 973 aa16.51■□□□□ 0.23
CLCNKA-203ENST00000439316 RPS6KA3P51812 740 aa16.51■□□□□ 0.23
CLCNKA-203ENST00000439316 PFKPQ01813 784 aa16.51■□□□□ 0.23
CLCNKA-203ENST00000439316 BIRC2Q13490 618 aa16.51■□□□□ 0.23
CLCNKA-203ENST00000439316 EIF4EBP2Q13542 120 aaPredicted RBP16.51■□□□□ 0.23
CLCNKA-203ENST00000439316 APOFQ13790 326 aa16.51■□□□□ 0.23
CLCNKA-203ENST00000439316 SQLEQ14534 574 aa16.51■□□□□ 0.23
CLCNKA-203ENST00000439316 LPIN1Q14693 890 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms