RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 ATMINO43313 823 aaPredicted RBP18.35■□□□□ 0.53
GTF3A-204ENST00000438571 DXOO77932 396 aaKnown RBP18.35■□□□□ 0.53
GTF3A-204ENST00000438571 ZIC2O95409 532 aaPredicted RBP18.35■□□□□ 0.53
GTF3A-204ENST00000438571 TPM2P07951 284 aa18.35■□□□□ 0.53
GTF3A-204ENST00000438571 TSHRP16473 764 aa18.35■□□□□ 0.53
GTF3A-204ENST00000438571 LSSP48449 732 aa18.35■□□□□ 0.53
GTF3A-204ENST00000438571 UBXN1Q04323 297 aa18.35■□□□□ 0.53
GTF3A-204ENST00000438571 NCAPHQ15003 741 aa18.35■□□□□ 0.53
GTF3A-204ENST00000438571 NR0B2Q15466 257 aa18.35■□□□□ 0.53
GTF3A-204ENST00000438571 CA9Q16790 459 aa18.35■□□□□ 0.53
GTF3A-204ENST00000438571 WSCD2Q2TBF2 565 aa18.35■□□□□ 0.53
GTF3A-204ENST00000438571 INO80DQ53TQ3 878 aaPredicted RBP18.35■□□□□ 0.53
GTF3A-204ENST00000438571 C6orf132Q5T0Z8 1188 aa18.35■□□□□ 0.53
GTF3A-204ENST00000438571 GPR155Q7Z3F1 870 aa18.35■□□□□ 0.53
GTF3A-204ENST00000438571 PRR11Q96HE9 360 aaPredicted RBP18.35■□□□□ 0.53
GTF3A-204ENST00000438571 VCPIP1Q96JH7 1222 aa18.35■□□□□ 0.53
GTF3A-204ENST00000438571 LRRC19Q9H756 370 aa18.35■□□□□ 0.53
GTF3A-204ENST00000438571 MFHAS1Q9Y4C4 1052 aa18.35■□□□□ 0.53
GTF3A-204ENST00000438571 DAAM1Q9Y4D1 1078 aa18.35■□□□□ 0.53
GTF3A-204ENST00000438571 YY2O15391 372 aa18.34■□□□□ 0.53
GTF3A-204ENST00000438571 BUB1BO60566 1050 aaPredicted RBP18.34■□□□□ 0.53
GTF3A-204ENST00000438571 C6P13671 934 aa18.34■□□□□ 0.53
GTF3A-204ENST00000438571 YBEYP58557 167 aaPredicted RBP18.34■□□□□ 0.53
GTF3A-204ENST00000438571 YPEL5P62699 121 aa18.34■□□□□ 0.53
GTF3A-204ENST00000438571 RAD51Q06609 339 aa18.34■□□□□ 0.53
GTF3A-204ENST00000438571 PTK2BQ14289 1009 aa18.34■□□□□ 0.53
GTF3A-204ENST00000438571 TMEM52BQ4KMG9 183 aa18.34■□□□□ 0.53
GTF3A-204ENST00000438571 FAXCQ5TGI0 409 aa18.34■□□□□ 0.53
GTF3A-204ENST00000438571 CLEC17AQ6ZS10 378 aa18.34■□□□□ 0.53
GTF3A-204ENST00000438571 MCOLN2Q8IZK6 566 aa18.34■□□□□ 0.53
GTF3A-204ENST00000438571 UMODL1-AS1Q8N2C9 162 aa18.34■□□□□ 0.53
GTF3A-204ENST00000438571 BTN2A2Q8WVV5 523 aa18.34■□□□□ 0.53
GTF3A-204ENST00000438571 CASKIN2Q8WXE0 1202 aa18.34■□□□□ 0.53
GTF3A-204ENST00000438571 TSACCQ96A04 125 aaPredicted RBP18.34■□□□□ 0.53
GTF3A-204ENST00000438571 ERGIC2Q96RQ1 377 aa18.34■□□□□ 0.53
GTF3A-204ENST00000438571 PEBP4Q96S96 227 aa18.34■□□□□ 0.53
GTF3A-204ENST00000438571 NCAPGQ9BPX3 1015 aa18.34■□□□□ 0.53
GTF3A-204ENST00000438571 SYNDIG1Q9H7V2 258 aa18.34■□□□□ 0.53
GTF3A-204ENST00000438571 PCDH12Q9NPG4 1184 aa18.34■□□□□ 0.53
GTF3A-204ENST00000438571 EVA1BQ9NVM1 165 aa18.34■□□□□ 0.53
GTF3A-204ENST00000438571 SIRPGQ9P1W8 387 aa18.34■□□□□ 0.53
GTF3A-204ENST00000438571 DKK3Q9UBP4 350 aa18.34■□□□□ 0.53
GTF3A-204ENST00000438571 UBA2Q9UBT2 640 aaPredicted RBP18.34■□□□□ 0.53
GTF3A-204ENST00000438571 RABGEF1Q9UJ41 708 aa18.34■□□□□ 0.53
GTF3A-204ENST00000438571 COL6A6A6NMZ7 2263 aa18.33■□□□□ 0.53
GTF3A-204ENST00000438571 TSPAN11A1L157 253 aa18.33■□□□□ 0.52
GTF3A-204ENST00000438571 LMO7DNF2Z398 122 aa18.33■□□□□ 0.52
GTF3A-204ENST00000438571 ATP1A3P13637 1013 aa18.33■□□□□ 0.52
GTF3A-204ENST00000438571 TPI1P60174 286 aa18.33■□□□□ 0.52
GTF3A-204ENST00000438571 MYL5Q02045 173 aa18.33■□□□□ 0.52
GTF3A-204ENST00000438571 PPARDQ03181 441 aa18.33■□□□□ 0.52
GTF3A-204ENST00000438571 ALG11Q2TAA5 492 aa18.33■□□□□ 0.52
GTF3A-204ENST00000438571 PARP15Q460N3 678 aa18.33■□□□□ 0.52
GTF3A-204ENST00000438571 ARFGAP1Q8N6T3 406 aa18.33■□□□□ 0.52
GTF3A-204ENST00000438571 KYQ8NBH2 561 aa18.33■□□□□ 0.52
GTF3A-204ENST00000438571 PCDH19Q8TAB3 1148 aa18.33■□□□□ 0.52
GTF3A-204ENST00000438571 NSMCE3Q96MG7 304 aa18.33■□□□□ 0.52
GTF3A-204ENST00000438571 CCDC3Q9BQI4 270 aa18.33■□□□□ 0.52
GTF3A-204ENST00000438571 CNPY3Q9BT09 278 aa18.33■□□□□ 0.52
GTF3A-204ENST00000438571 SYT11Q9BT88 431 aa18.33■□□□□ 0.52
GTF3A-204ENST00000438571 CPEB1Q9BZB8 566 aaKnown RBP18.33■□□□□ 0.52
GTF3A-204ENST00000438571 SLC39A8Q9C0K1 460 aa18.33■□□□□ 0.52
GTF3A-204ENST00000438571 CATSPERBQ9H7T0 1116 aa18.33■□□□□ 0.52
GTF3A-204ENST00000438571 OR1A2Q9Y585 309 aa18.33■□□□□ 0.52
GTF3A-204ENST00000438571 KALRNO60229 2985 aa18.33■□□□□ 0.52
GTF3A-204ENST00000438571 TMCO5BA8MYB1 307 aa18.32■□□□□ 0.52
GTF3A-204ENST00000438571 PCCBP05166 539 aa18.32■□□□□ 0.52
GTF3A-204ENST00000438571 ANXA6P08133 673 aa18.32■□□□□ 0.52
GTF3A-204ENST00000438571 XPAP23025 273 aaPredicted RBP18.32■□□□□ 0.52
GTF3A-204ENST00000438571 MMP12P39900 470 aa18.32■□□□□ 0.52
GTF3A-204ENST00000438571 UGP2Q16851 508 aa18.32■□□□□ 0.52
GTF3A-204ENST00000438571 ARHGAP40Q5TG30 622 aa18.32■□□□□ 0.52
GTF3A-204ENST00000438571 ACAD10Q6JQN1 1059 aa18.32■□□□□ 0.52
GTF3A-204ENST00000438571 FOXR1Q6PIV2 292 aa18.32■□□□□ 0.52
GTF3A-204ENST00000438571 RBM44Q6ZP01 1051 aaKnown RBP18.32■□□□□ 0.52
GTF3A-204ENST00000438571 ARHGAP36Q6ZRI8 547 aa18.32■□□□□ 0.52
GTF3A-204ENST00000438571 CAMK1DQ8IU85 385 aa18.32■□□□□ 0.52
GTF3A-204ENST00000438571 HID1Q8IV36 788 aa18.32■□□□□ 0.52
GTF3A-204ENST00000438571 TP53INP2Q8IXH6 220 aa18.32■□□□□ 0.52
GTF3A-204ENST00000438571 PLA2G15Q8NCC3 412 aa18.32■□□□□ 0.52
GTF3A-204ENST00000438571 KCNE4Q8WWG9 221 aa18.32■□□□□ 0.52
GTF3A-204ENST00000438571 FUBP1Q96AE4 644 aaKnown RBP18.32■□□□□ 0.52
GTF3A-204ENST00000438571 PDXPQ96GD0 296 aa18.32■□□□□ 0.52
GTF3A-204ENST00000438571 KCTD15Q96SI1 283 aaPredicted RBP18.32■□□□□ 0.52
GTF3A-204ENST00000438571 SNRNP25Q9BV90 132 aaKnown RBP18.32■□□□□ 0.52
GTF3A-204ENST00000438571 SLC13A1Q9BZW2 595 aa18.32■□□□□ 0.52
GTF3A-204ENST00000438571 TRIM7Q9C029 511 aa18.32■□□□□ 0.52
GTF3A-204ENST00000438571 SUV39H2Q9H5I1 410 aa18.32■□□□□ 0.52
GTF3A-204ENST00000438571 AP4E1Q9UPM8 1137 aa18.32■□□□□ 0.52
GTF3A-204ENST00000438571 TEX51A0A1B0GUA7 166 aa18.31■□□□□ 0.52
GTF3A-204ENST00000438571 RIOK3O14730 519 aaKnown RBP18.31■□□□□ 0.52
GTF3A-204ENST00000438571 FGF10O15520 208 aaPredicted RBP18.31■□□□□ 0.52
GTF3A-204ENST00000438571 KLK10O43240 276 aa18.31■□□□□ 0.52
GTF3A-204ENST00000438571 TEX33O43247 280 aa18.31■□□□□ 0.52
GTF3A-204ENST00000438571 PRAMEF11O60813 436 aa18.31■□□□□ 0.52
GTF3A-204ENST00000438571 PAPOLAP51003 745 aaKnown RBP18.31■□□□□ 0.52
GTF3A-204ENST00000438571 HK3P52790 923 aa18.31■□□□□ 0.52
GTF3A-204ENST00000438571 ERVPABLB-1P60509 514 aa18.31■□□□□ 0.52
GTF3A-204ENST00000438571 ELP6Q0PNE2 266 aa18.31■□□□□ 0.52
GTF3A-204ENST00000438571 RALGDSQ12967 914 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms