RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 ADRA1BP35368 520 aa7.87□□□□□ -1.15
VPS50-204ENST00000438395 SOX5P35711 763 aa7.87□□□□□ -1.15
VPS50-204ENST00000438395 ACVRL1P37023 503 aa7.87□□□□□ -1.15
VPS50-204ENST00000438395 STAT1P42224 750 aa7.87□□□□□ -1.15
VPS50-204ENST00000438395 PTPN9P43378 593 aa7.87□□□□□ -1.15
VPS50-204ENST00000438395 TMPRSS3P57727 454 aa7.87□□□□□ -1.15
VPS50-204ENST00000438395 POLR2FP61218 127 aaKnown RBP7.87□□□□□ -1.15
VPS50-204ENST00000438395 RHOAP61586 193 aa7.87□□□□□ -1.15
VPS50-204ENST00000438395 CXADRP78310 365 aa7.87□□□□□ -1.15
VPS50-204ENST00000438395 ARF5P84085 180 aa7.87□□□□□ -1.15
VPS50-204ENST00000438395 FZD2Q14332 565 aa7.87□□□□□ -1.15
VPS50-204ENST00000438395 DEFB133Q30KQ1 61 aa7.87□□□□□ -1.15
VPS50-204ENST00000438395 TAF1BQ53T94 588 aaPredicted RBP7.87□□□□□ -1.15
VPS50-204ENST00000438395 OXLD1Q5BKU9 147 aa7.87□□□□□ -1.15
VPS50-204ENST00000438395 CT47A1Q5JQC4 288 aaPredicted RBP7.87□□□□□ -1.15
VPS50-204ENST00000438395 FAXCQ5TGI0 409 aa7.87□□□□□ -1.15
VPS50-204ENST00000438395 DNAJC24Q6P3W2 148 aa7.87□□□□□ -1.15
VPS50-204ENST00000438395 LEKR1Q6ZMV7 388 aa7.87□□□□□ -1.15
VPS50-204ENST00000438395 RBM44Q6ZP01 1051 aaKnown RBP7.87□□□□□ -1.15
VPS50-204ENST00000438395 STRADAQ7RTN6 431 aa7.87□□□□□ -1.15
VPS50-204ENST00000438395 EFL1Q7Z2Z2 1120 aaKnown RBP7.87□□□□□ -1.15
VPS50-204ENST00000438395 PHLDB2Q86SQ0 1253 aa7.87□□□□□ -1.15
VPS50-204ENST00000438395 TTC7BQ86TV6 843 aa7.87□□□□□ -1.15
VPS50-204ENST00000438395 SPACA3Q8IXA5 215 aa7.87□□□□□ -1.15
VPS50-204ENST00000438395 SLC22A18ASQ8N1D0 253 aa7.87□□□□□ -1.15
VPS50-204ENST00000438395 FAM181AQ8N9Y4 354 aa7.87□□□□□ -1.15
VPS50-204ENST00000438395 SLC30A5Q8TAD4 765 aa7.87□□□□□ -1.15
VPS50-204ENST00000438395 FAM172AQ8WUF8 416 aa7.87□□□□□ -1.15
VPS50-204ENST00000438395 SLC20A1Q8WUM9 679 aa7.87□□□□□ -1.15
VPS50-204ENST00000438395 KCNE4Q8WWG9 221 aa7.87□□□□□ -1.15
VPS50-204ENST00000438395 RXFP2Q8WXD0 754 aa7.87□□□□□ -1.15
VPS50-204ENST00000438395 SCG3Q8WXD2 468 aaKnown RBP7.87□□□□□ -1.15
VPS50-204ENST00000438395 CASKIN2Q8WXE0 1202 aa7.87□□□□□ -1.15
VPS50-204ENST00000438395 ZNF592Q92610 1267 aa7.87□□□□□ -1.15
VPS50-204ENST00000438395 ARHGEF2Q92974 986 aaKnown RBP7.87□□□□□ -1.15
VPS50-204ENST00000438395 VPS16Q9H269 839 aa7.87□□□□□ -1.15
VPS50-204ENST00000438395 POLR1BQ9H9Y6 1135 aa7.87□□□□□ -1.15
VPS50-204ENST00000438395 NLRC4Q9NPP4 1024 aa7.87□□□□□ -1.15
VPS50-204ENST00000438395 TMEM248Q9NWD8 314 aa7.87□□□□□ -1.15
VPS50-204ENST00000438395 DONSONQ9NYP3 566 aa7.87□□□□□ -1.15
VPS50-204ENST00000438395 ADAM22Q9P0K1 906 aa7.87□□□□□ -1.15
VPS50-204ENST00000438395 TMEM59LQ9UK28 342 aa7.87□□□□□ -1.15
VPS50-204ENST00000438395 NOCTQ9UK39 431 aaKnown RBP7.87□□□□□ -1.15
VPS50-204ENST00000438395 ITM2BQ9Y287 266 aa7.87□□□□□ -1.15
VPS50-204ENST00000438395 PCDHB1Q9Y5F3 818 aa7.87□□□□□ -1.15
VPS50-204ENST00000438395 PTPRBP23467 1997 aa7.87□□□□□ -1.15
VPS50-204ENST00000438395 ADAMTS20P59510 1910 aa7.87□□□□□ -1.15
VPS50-204ENST00000438395 CFAP46Q8IYW2 2715 aa7.87□□□□□ -1.15
VPS50-204ENST00000438395 LAMA5O15230 3695 aa7.87□□□□□ -1.15
VPS50-204ENST00000438395 PLXNB3Q9ULL4 1909 aa7.86□□□□□ -1.15
VPS50-204ENST00000438395 CAPN8A6NHC0 703 aa7.86□□□□□ -1.15
VPS50-204ENST00000438395 MUSKO15146 869 aa7.86□□□□□ -1.15
VPS50-204ENST00000438395 ATXN7O15265 892 aaPredicted RBP7.86□□□□□ -1.15
VPS50-204ENST00000438395 RAD51BO15315 384 aa7.86□□□□□ -1.15
VPS50-204ENST00000438395 CREB3O43889 395 aa7.86□□□□□ -1.15
VPS50-204ENST00000438395 TM7SF2O76062 418 aa7.86□□□□□ -1.15
VPS50-204ENST00000438395 TMCC1O94876 653 aa7.86□□□□□ -1.15
VPS50-204ENST00000438395 LRIG2O94898 1065 aa7.86□□□□□ -1.15
VPS50-204ENST00000438395 CCDC172P0C7W6 258 aa7.86□□□□□ -1.15
VPS50-204ENST00000438395 GPD1P21695 349 aa7.86□□□□□ -1.15
VPS50-204ENST00000438395 HTR1BP28222 390 aa7.86□□□□□ -1.15
VPS50-204ENST00000438395 LSSP48449 732 aa7.86□□□□□ -1.15
VPS50-204ENST00000438395 BLKP51451 505 aa7.86□□□□□ -1.15
VPS50-204ENST00000438395 SUOXP51687 545 aa7.86□□□□□ -1.15
VPS50-204ENST00000438395 ERVPABLB-1P60509 514 aa7.86□□□□□ -1.15
VPS50-204ENST00000438395 NRG1Q02297 640 aaPredicted RBP7.86□□□□□ -1.15
VPS50-204ENST00000438395 PPARDQ03181 441 aa7.86□□□□□ -1.15
VPS50-204ENST00000438395 TLE3Q04726 772 aa7.86□□□□□ -1.15
VPS50-204ENST00000438395 ELP6Q0PNE2 266 aa7.86□□□□□ -1.15
VPS50-204ENST00000438395 ELOCQ15369 112 aa7.86□□□□□ -1.15
VPS50-204ENST00000438395 C15orf59Q2T9L4 293 aaPredicted RBP7.86□□□□□ -1.15
VPS50-204ENST00000438395 MYLK3Q32MK0 819 aa7.86□□□□□ -1.15
VPS50-204ENST00000438395 PRRT3Q5FWE3 981 aa7.86□□□□□ -1.15
VPS50-204ENST00000438395 C3orf38Q5JPI3 329 aa7.86□□□□□ -1.15
VPS50-204ENST00000438395 ATXN7L2Q5T6C5 722 aaPredicted RBP7.86□□□□□ -1.15
VPS50-204ENST00000438395 MANEALQ5VSG8 457 aa7.86□□□□□ -1.15
VPS50-204ENST00000438395 TRNP1Q6NT89 227 aa7.86□□□□□ -1.15
VPS50-204ENST00000438395 ESRP1Q6NXG1 681 aaKnown RBP7.86□□□□□ -1.15
VPS50-204ENST00000438395 ERAP2Q6P179 960 aa7.86□□□□□ -1.15
VPS50-204ENST00000438395 SCYL2Q6P3W7 929 aa7.86□□□□□ -1.15
VPS50-204ENST00000438395 FOXR1Q6PIV2 292 aa7.86□□□□□ -1.15
VPS50-204ENST00000438395 GDPD4Q6W3E5 623 aa7.86□□□□□ -1.15
VPS50-204ENST00000438395 SLFN11Q7Z7L1 901 aa7.86□□□□□ -1.15
VPS50-204ENST00000438395 PHACTR4Q8IZ21 702 aa7.86□□□□□ -1.15
VPS50-204ENST00000438395 SVOPQ8N4V2 548 aa7.86□□□□□ -1.15
VPS50-204ENST00000438395 RTL3Q8N8U3 475 aaKnown RBP7.86□□□□□ -1.15
VPS50-204ENST00000438395 NEK11Q8NG66 645 aa7.86□□□□□ -1.15
VPS50-204ENST00000438395 ATL2Q8NHH9 583 aa7.86□□□□□ -1.15
VPS50-204ENST00000438395 WDR48Q8TAF3 677 aa7.86□□□□□ -1.15
VPS50-204ENST00000438395 GPT2Q8TD30 523 aa7.86□□□□□ -1.15
VPS50-204ENST00000438395 ASB12Q8WXK4 309 aa7.86□□□□□ -1.15
VPS50-204ENST00000438395 GRAMD1AQ96CP6 724 aa7.86□□□□□ -1.15
VPS50-204ENST00000438395 CCDC97Q96F63 343 aaPredicted RBP7.86□□□□□ -1.15
VPS50-204ENST00000438395 BMFQ96LC9 184 aa7.86□□□□□ -1.15
VPS50-204ENST00000438395 KLHL32Q96NJ5 620 aa7.86□□□□□ -1.15
VPS50-204ENST00000438395 BBC3Q96PG8 261 aaPredicted RBP7.86□□□□□ -1.15
VPS50-204ENST00000438395 LENG8Q96PV6 779 aaPredicted RBP7.86□□□□□ -1.15
VPS50-204ENST00000438395 WRAP53Q9BUR4 548 aaKnown RBP7.86□□□□□ -1.15
VPS50-204ENST00000438395 NAA15Q9BXJ9 866 aaKnown RBP7.86□□□□□ -1.15
VPS50-204ENST00000438395 PRORYQ9H606 182 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms