RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 NVLO15381 856 aaKnown RBP9.56□□□□□ -0.88
CUX1-206ENST00000437600 NCAM2O15394 837 aa9.56□□□□□ -0.88
CUX1-206ENST00000437600 DLX3O60479 287 aa9.56□□□□□ -0.88
CUX1-206ENST00000437600 OR1D2P34982 312 aa9.56□□□□□ -0.88
CUX1-206ENST00000437600 CA8P35219 290 aa9.56□□□□□ -0.88
CUX1-206ENST00000437600 WNT3AP56704 352 aa9.56□□□□□ -0.88
CUX1-206ENST00000437600 IKBKEQ14164 716 aa9.56□□□□□ -0.88
CUX1-206ENST00000437600 LPCAT4Q643R3 524 aa9.56□□□□□ -0.88
CUX1-206ENST00000437600 PKN3Q6P5Z2 889 aa9.56□□□□□ -0.88
CUX1-206ENST00000437600 RNF111Q6ZNA4 994 aa9.56□□□□□ -0.88
CUX1-206ENST00000437600 LRRC74BQ6ZQY2 392 aa9.56□□□□□ -0.88
CUX1-206ENST00000437600 ACMSDQ8TDX5 336 aa9.56□□□□□ -0.88
CUX1-206ENST00000437600 PGAP3Q96FM1 320 aaPredicted RBP9.56□□□□□ -0.88
CUX1-206ENST00000437600 EXOC2Q96KP1 924 aa9.56□□□□□ -0.88
CUX1-206ENST00000437600 TRHDEQ9UKU6 1024 aa9.56□□□□□ -0.88
CUX1-206ENST00000437600 LRRC42Q9Y546 428 aa9.56□□□□□ -0.88
CUX1-206ENST00000437600 DOCK6Q96HP0 2047 aa9.56□□□□□ -0.88
CUX1-206ENST00000437600 PTPRDP23468 1912 aa9.56□□□□□ -0.88
CUX1-206ENST00000437600 SF3B1O75533 1304 aaKnown RBP eCLIP9.56□□□□□ -0.884e-6■■■■■ 58.5
CUX1-206ENST00000437600 TRIOBPQ9H2D6 2365 aa9.56□□□□□ -0.88
CUX1-206ENST00000437600 FAM95CA0A1B0GW59 222 aa9.56□□□□□ -0.88
CUX1-206ENST00000437600 MAP3K13O43283 966 aa9.56□□□□□ -0.88
CUX1-206ENST00000437600 TM7SF2O76062 418 aa9.56□□□□□ -0.88
CUX1-206ENST00000437600 CXCL10P02778 98 aa9.56□□□□□ -0.88
CUX1-206ENST00000437600 ZCCHC18P0CG32 403 aa9.56□□□□□ -0.88
CUX1-206ENST00000437600 KCNC1P48547 511 aa9.56□□□□□ -0.88
CUX1-206ENST00000437600 HCAR3P49019 387 aa9.56□□□□□ -0.88
CUX1-206ENST00000437600 ALDH7A1P49419 539 aaKnown RBP9.56□□□□□ -0.88
CUX1-206ENST00000437600 ARSDP51689 593 aa9.56□□□□□ -0.88
CUX1-206ENST00000437600 PKNOX1P55347 436 aa9.56□□□□□ -0.88
CUX1-206ENST00000437600 SLC34A1Q06495 639 aa9.56□□□□□ -0.88
CUX1-206ENST00000437600 NFE2Q16621 373 aaPredicted RBP9.56□□□□□ -0.88
CUX1-206ENST00000437600 LSM12Q3MHD2 195 aaKnown RBP9.56□□□□□ -0.88
CUX1-206ENST00000437600 C1orf53Q5VUE5 145 aa9.56□□□□□ -0.88
CUX1-206ENST00000437600 TMC7Q7Z402 723 aa9.56□□□□□ -0.88
CUX1-206ENST00000437600 NPAS4Q8IUM7 802 aa9.56□□□□□ -0.88
CUX1-206ENST00000437600 CCDC85CA6NKD9 419 aa9.55□□□□□ -0.88
CUX1-206ENST00000437600 PPP6CO00743 305 aa9.55□□□□□ -0.88
CUX1-206ENST00000437600 MATN3O15232 486 aa9.55□□□□□ -0.88
CUX1-206ENST00000437600 LINGO3P0C6S8 592 aa9.55□□□□□ -0.88
CUX1-206ENST00000437600 SPATA31D3P0C874 917 aa9.55□□□□□ -0.88
CUX1-206ENST00000437600 UBTFL6P0CB48 400 aaPredicted RBP9.55□□□□□ -0.88
CUX1-206ENST00000437600 ACVRL1P37023 503 aa9.55□□□□□ -0.88
CUX1-206ENST00000437600 NPY2RP49146 381 aa9.55□□□□□ -0.88
CUX1-206ENST00000437600 COPAP53621 1224 aa9.55□□□□□ -0.88
CUX1-206ENST00000437600 MLLT6P55198 1093 aaPredicted RBP9.55□□□□□ -0.88
CUX1-206ENST00000437600 KIAA1841Q6NSI8 718 aa9.55□□□□□ -0.88
CUX1-206ENST00000437600 SPATA31D4Q6ZUB0 917 aa9.55□□□□□ -0.88
CUX1-206ENST00000437600 PIM3Q86V86 326 aa9.55□□□□□ -0.88
CUX1-206ENST00000437600 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.55□□□□□ -0.886e-7■■■■■ 139.2
CUX1-206ENST00000437600 ENDOVQ8N8Q3 282 aaKnown RBP9.55□□□□□ -0.88
CUX1-206ENST00000437600 HEXDCQ8WVB3 486 aa9.55□□□□□ -0.88
CUX1-206ENST00000437600 IRGQQ8WZA9 623 aa9.55□□□□□ -0.88
CUX1-206ENST00000437600 SLC45A3Q96JT2 553 aa9.55□□□□□ -0.88
CUX1-206ENST00000437600 TUBB6Q9BUF5 446 aa9.55□□□□□ -0.88
CUX1-206ENST00000437600 RMI1Q9H9A7 625 aa9.55□□□□□ -0.88
CUX1-206ENST00000437600 OXSMQ9NWU1 459 aa9.55□□□□□ -0.88
CUX1-206ENST00000437600 MKS1Q9NXB0 559 aa9.55□□□□□ -0.88
CUX1-206ENST00000437600 STOML1Q9UBI4 398 aa9.55□□□□□ -0.88
CUX1-206ENST00000437600 SSX2IPQ9Y2D8 614 aa9.55□□□□□ -0.88
CUX1-206ENST00000437600 ACOT9Q9Y305 439 aa9.55□□□□□ -0.88
CUX1-206ENST00000437600 A0A0D9SEW6 157 aa9.55□□□□□ -0.88
CUX1-206ENST00000437600 SLC12A8A0AV02 714 aa9.55□□□□□ -0.88
CUX1-206ENST00000437600 DPPA5A6NC42 116 aa9.55□□□□□ -0.88
CUX1-206ENST00000437600 INPPL1O15357 1258 aa9.55□□□□□ -0.88
CUX1-206ENST00000437600 TSPAN3O60637 253 aa9.55□□□□□ -0.88
CUX1-206ENST00000437600 IGLV3-25P01717 112 aa9.55□□□□□ -0.88
CUX1-206ENST00000437600 GRK2P25098 689 aa9.55□□□□□ -0.88
CUX1-206ENST00000437600 YWHAQP27348 245 aa9.55□□□□□ -0.88
CUX1-206ENST00000437600 ARCN1P48444 511 aaKnown RBP9.55□□□□□ -0.88
CUX1-206ENST00000437600 CD151P48509 253 aa9.55□□□□□ -0.88
CUX1-206ENST00000437600 KCNQ1P51787 676 aa9.55□□□□□ -0.88
CUX1-206ENST00000437600 CDH13P55290 713 aa9.55□□□□□ -0.88
CUX1-206ENST00000437600 BLMHQ13867 455 aa9.55□□□□□ -0.88
CUX1-206ENST00000437600 PCID2Q5JVF3 399 aa9.55□□□□□ -0.88
CUX1-206ENST00000437600 ARTNQ5T4W7 220 aa9.55□□□□□ -0.88
CUX1-206ENST00000437600 UBE2Q1Q7Z7E8 422 aa9.55□□□□□ -0.88
CUX1-206ENST00000437600 MON1AQ86VX9 555 aa9.55□□□□□ -0.88
CUX1-206ENST00000437600 CRIPAKQ8N1N5 446 aa9.55□□□□□ -0.88
CUX1-206ENST00000437600 ANKRD49Q8WVL7 239 aa9.55□□□□□ -0.88
CUX1-206ENST00000437600 OLFM1Q99784 485 aa9.55□□□□□ -0.88
CUX1-206ENST00000437600 C1QTNF1Q9BXJ1 281 aa9.55□□□□□ -0.88
CUX1-206ENST00000437600 ILKAPQ9H0C8 392 aaPredicted RBP9.55□□□□□ -0.88
CUX1-206ENST00000437600 CDH19Q9H159 772 aa9.55□□□□□ -0.88
CUX1-206ENST00000437600 SMOC2Q9H3U7 446 aa9.55□□□□□ -0.88
CUX1-206ENST00000437600 TSR3Q9UJK0 312 aaKnown RBP9.55□□□□□ -0.88
CUX1-206ENST00000437600 MYO16Q9Y6X6 1858 aa9.54□□□□□ -0.88
CUX1-206ENST00000437600 ARHGEF37A1IGU5 675 aa9.54□□□□□ -0.88
CUX1-206ENST00000437600 C9JVG2 144 aa9.54□□□□□ -0.88
CUX1-206ENST00000437600 ANPEPP15144 967 aa9.54□□□□□ -0.88
CUX1-206ENST00000437600 ATF6P18850 670 aa9.54□□□□□ -0.88
CUX1-206ENST00000437600 CCNCP24863 283 aa9.54□□□□□ -0.88
CUX1-206ENST00000437600 SOX11P35716 441 aa9.54□□□□□ -0.88
CUX1-206ENST00000437600 HARS2P49590 506 aaKnown RBP9.54□□□□□ -0.88
CUX1-206ENST00000437600 TBX4P57082 545 aa9.54□□□□□ -0.88
CUX1-206ENST00000437600 WDR5P61964 334 aaKnown RBP9.54□□□□□ -0.88
CUX1-206ENST00000437600 ARMC3Q5W041 872 aa9.54□□□□□ -0.88
CUX1-206ENST00000437600 NEPROQ6NW34 567 aa9.54□□□□□ -0.88
CUX1-206ENST00000437600 FBXL22Q6P050 247 aa9.54□□□□□ -0.88
CUX1-206ENST00000437600 SLC30A9Q6PML9 568 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms