RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 GPT2Q8TD30 523 aa7.86□□□□□ -1.15
VPS50-203ENST00000436177 ASB12Q8WXK4 309 aa7.86□□□□□ -1.15
VPS50-203ENST00000436177 GRAMD1AQ96CP6 724 aa7.86□□□□□ -1.15
VPS50-203ENST00000436177 CCDC97Q96F63 343 aaPredicted RBP7.86□□□□□ -1.15
VPS50-203ENST00000436177 BMFQ96LC9 184 aa7.86□□□□□ -1.15
VPS50-203ENST00000436177 KLHL32Q96NJ5 620 aa7.86□□□□□ -1.15
VPS50-203ENST00000436177 BBC3Q96PG8 261 aaPredicted RBP7.86□□□□□ -1.15
VPS50-203ENST00000436177 LENG8Q96PV6 779 aaPredicted RBP7.86□□□□□ -1.15
VPS50-203ENST00000436177 WRAP53Q9BUR4 548 aaKnown RBP7.86□□□□□ -1.15
VPS50-203ENST00000436177 NAA15Q9BXJ9 866 aaKnown RBP7.86□□□□□ -1.15
VPS50-203ENST00000436177 PRORYQ9H606 182 aa7.86□□□□□ -1.15
VPS50-203ENST00000436177 CATSPERBQ9H7T0 1116 aa7.86□□□□□ -1.15
VPS50-203ENST00000436177 SAMSN1Q9NSI8 373 aaKnown RBP7.86□□□□□ -1.15
VPS50-203ENST00000436177 SETXQ7Z333 2677 aaKnown RBP7.86□□□□□ -1.15
VPS50-203ENST00000436177 C2CD4BA6NLJ0 364 aa7.85□□□□□ -1.15
VPS50-203ENST00000436177 LMO7DNF2Z398 122 aa7.85□□□□□ -1.15
VPS50-203ENST00000436177 TOR1BO14657 336 aa7.85□□□□□ -1.15
VPS50-203ENST00000436177 TPP1O14773 563 aa7.85□□□□□ -1.15
VPS50-203ENST00000436177 FGF10O15520 208 aaPredicted RBP7.85□□□□□ -1.15
VPS50-203ENST00000436177 KLK10O43240 276 aa7.85□□□□□ -1.15
VPS50-203ENST00000436177 SIAH2O43255 324 aa7.85□□□□□ -1.15
VPS50-203ENST00000436177 MMP20O60882 483 aa7.85□□□□□ -1.15
VPS50-203ENST00000436177 ZNF821O75541 412 aaPredicted RBP7.85□□□□□ -1.15
VPS50-203ENST00000436177 TCEA3O75764 348 aa7.85□□□□□ -1.15
VPS50-203ENST00000436177 ALPIP09923 528 aa7.85□□□□□ -1.15
VPS50-203ENST00000436177 MYF5P13349 255 aa7.85□□□□□ -1.15
VPS50-203ENST00000436177 CTSEP14091 401 aa7.85□□□□□ -1.15
VPS50-203ENST00000436177 GKP32189 559 aa7.85□□□□□ -1.15
VPS50-203ENST00000436177 YBEYP58557 167 aaPredicted RBP7.85□□□□□ -1.15
VPS50-203ENST00000436177 TPI1P60174 286 aa7.85□□□□□ -1.15
VPS50-203ENST00000436177 YPEL5P62699 121 aa7.85□□□□□ -1.15
VPS50-203ENST00000436177 FMO1Q01740 532 aa7.85□□□□□ -1.15
VPS50-203ENST00000436177 SPIDRQ14159 915 aa7.85□□□□□ -1.15
VPS50-203ENST00000436177 FGL2Q14314 439 aa7.85□□□□□ -1.15
VPS50-203ENST00000436177 GRM3Q14832 879 aa7.85□□□□□ -1.15
VPS50-203ENST00000436177 KRT31Q15323 416 aa7.85□□□□□ -1.15
VPS50-203ENST00000436177 ISXQ2M1V0 245 aa7.85□□□□□ -1.15
VPS50-203ENST00000436177 PARP15Q460N3 678 aa7.85□□□□□ -1.15
VPS50-203ENST00000436177 CCDC14Q49A88 953 aa7.85□□□□□ -1.15
VPS50-203ENST00000436177 LRRC73Q5JTD7 316 aa7.85□□□□□ -1.15
VPS50-203ENST00000436177 GUSBP11Q6P575 273 aa7.85□□□□□ -1.15
VPS50-203ENST00000436177 DCUN1D2Q6PH85 259 aa7.85□□□□□ -1.15
VPS50-203ENST00000436177 MACC1Q6ZN28 852 aa7.85□□□□□ -1.15
VPS50-203ENST00000436177 NLRP14Q86W24 1093 aa7.85□□□□□ -1.15
VPS50-203ENST00000436177 FSTL5Q8N475 847 aaPredicted RBP7.85□□□□□ -1.15
VPS50-203ENST00000436177 ARL14Q8N4G2 192 aa7.85□□□□□ -1.15
VPS50-203ENST00000436177 CCDC185Q8N715 623 aa7.85□□□□□ -1.15
VPS50-203ENST00000436177 LSM14AQ8ND56 463 aaKnown RBP7.85□□□□□ -1.15
VPS50-203ENST00000436177 C3orf20Q8ND61 904 aa7.85□□□□□ -1.15
VPS50-203ENST00000436177 NTAN1Q96AB6 310 aa7.85□□□□□ -1.15
VPS50-203ENST00000436177 VCPIP1Q96JH7 1222 aa7.85□□□□□ -1.15
VPS50-203ENST00000436177 TTYH3Q9C0H2 523 aa7.85□□□□□ -1.15
VPS50-203ENST00000436177 GANQ9H2C0 597 aa7.85□□□□□ -1.15
VPS50-203ENST00000436177 UBA2Q9UBT2 640 aaPredicted RBP7.85□□□□□ -1.15
VPS50-203ENST00000436177 ZNF212Q9UDV6 495 aa7.85□□□□□ -1.15
VPS50-203ENST00000436177 GGT7Q9UJ14 662 aa7.85□□□□□ -1.15
VPS50-203ENST00000436177 SALL4Q9UJQ4 1053 aa7.85□□□□□ -1.15
VPS50-203ENST00000436177 RAI2Q9Y5P3 530 aa7.85□□□□□ -1.15
VPS50-203ENST00000436177 NYNRINQ9P2P1 1898 aaKnown RBP7.85□□□□□ -1.15
VPS50-203ENST00000436177 TMEM110-MUSTN1A8MSY1 372 aa7.84□□□□□ -1.15
VPS50-203ENST00000436177 RASA4BC9J798 803 aa7.84□□□□□ -1.15
VPS50-203ENST00000436177 FAM72CH0Y354 149 aa7.84□□□□□ -1.15
VPS50-203ENST00000436177 RNF103O00237 685 aa7.84□□□□□ -1.15
VPS50-203ENST00000436177 AREL1O15033 823 aa7.84□□□□□ -1.15
VPS50-203ENST00000436177 DAPK3O43293 454 aa7.84□□□□□ -1.15
VPS50-203ENST00000436177 RASA4O43374 803 aa7.84□□□□□ -1.15
VPS50-203ENST00000436177 KDELR3O43731 214 aa7.84□□□□□ -1.15
VPS50-203ENST00000436177 LZTS3O60299 673 aaPredicted RBP7.84□□□□□ -1.15
VPS50-203ENST00000436177 RASGRP1O95267 797 aa7.84□□□□□ -1.15
VPS50-203ENST00000436177 GJB6O95452 261 aa7.84□□□□□ -1.15
VPS50-203ENST00000436177 PRB1P04280 392 aa7.84□□□□□ -1.15
VPS50-203ENST00000436177 CYP1A1P04798 512 aaPredicted RBP7.84□□□□□ -1.15
VPS50-203ENST00000436177 CDK11BP21127 795 aaKnown RBP7.84□□□□□ -1.15
VPS50-203ENST00000436177 RFC1P35251 1148 aaPredicted RBP7.84□□□□□ -1.15
VPS50-203ENST00000436177 IGFALSP35858 605 aa7.84□□□□□ -1.15
VPS50-203ENST00000436177 EIF4A3P38919 411 aaKnown RBP7.84□□□□□ -1.15
VPS50-203ENST00000436177 ZNF143P52747 638 aaPredicted RBP7.84□□□□□ -1.15
VPS50-203ENST00000436177 AIF1P55008 147 aa7.84□□□□□ -1.15
VPS50-203ENST00000436177 ADKP55263 362 aaKnown RBP7.84□□□□□ -1.15
VPS50-203ENST00000436177 HDAC4P56524 1084 aa7.84□□□□□ -1.15
VPS50-203ENST00000436177 PFN3P60673 137 aa7.84□□□□□ -1.15
VPS50-203ENST00000436177 SH3BP2P78314 561 aa7.84□□□□□ -1.15
VPS50-203ENST00000436177 RHDQ02161 417 aa7.84□□□□□ -1.15
VPS50-203ENST00000436177 UBXN1Q04323 297 aa7.84□□□□□ -1.15
VPS50-203ENST00000436177 C1orf61Q13536 156 aa7.84□□□□□ -1.15
VPS50-203ENST00000436177 LRRC14Q15048 493 aa7.84□□□□□ -1.15
VPS50-203ENST00000436177 IRF4Q15306 451 aa7.84□□□□□ -1.15
VPS50-203ENST00000436177 CLEC16AQ2KHT3 1053 aa7.84□□□□□ -1.15
VPS50-203ENST00000436177 KLHL40Q2TBA0 621 aa7.84□□□□□ -1.15
VPS50-203ENST00000436177 INO80DQ53TQ3 878 aaPredicted RBP7.84□□□□□ -1.15
VPS50-203ENST00000436177 ARHGAP40Q5TG30 622 aa7.84□□□□□ -1.15
VPS50-203ENST00000436177 FAM72AQ5TYM5 149 aa7.84□□□□□ -1.15
VPS50-203ENST00000436177 CDCP2Q5VXM1 449 aa7.84□□□□□ -1.15
VPS50-203ENST00000436177 FAM72DQ6L9T8 149 aa7.84□□□□□ -1.15
VPS50-203ENST00000436177 PPP1R2P3Q6NXS1 205 aa7.84□□□□□ -1.15
VPS50-203ENST00000436177 BRAT1Q6PJG6 821 aa7.84□□□□□ -1.15
VPS50-203ENST00000436177 CRTC1Q6UUV9 634 aa7.84□□□□□ -1.15
VPS50-203ENST00000436177 SASS6Q6UVJ0 657 aa7.84□□□□□ -1.15
VPS50-203ENST00000436177 RD3Q7Z3Z2 195 aa7.84□□□□□ -1.15
VPS50-203ENST00000436177 BNIPLQ7Z465 357 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms