RNA–Protein interactions for RNA: ENST00000432331.1

LINC00390-201, long intergenic non-protein coding RNA 390, humanhuman

TSL 5 BASIC

Gene LINC00390, Length 340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00390-201ENST00000432331 GPR20Q99678 358 aa6.92□□□□□ -1.3
LINC00390-201ENST00000432331 TSEN34Q9BSV6 310 aaKnown RBP6.92□□□□□ -1.3
LINC00390-201ENST00000432331 C1QTNF7Q9BXJ2 289 aa6.92□□□□□ -1.3
LINC00390-201ENST00000432331 AP5M1Q9H0R1 490 aa6.92□□□□□ -1.3
LINC00390-201ENST00000432331 ATP13A3Q9H7F0 1226 aa6.92□□□□□ -1.3
LINC00390-201ENST00000432331 SPC25Q9HBM1 224 aa6.92□□□□□ -1.3
LINC00390-201ENST00000432331 SIX2Q9NPC8 291 aa6.92□□□□□ -1.3
LINC00390-201ENST00000432331 CD93Q9NPY3 652 aa6.92□□□□□ -1.3
LINC00390-201ENST00000432331 RPRD1BQ9NQG5 326 aaKnown RBP6.92□□□□□ -1.3
LINC00390-201ENST00000432331 NECTIN3Q9NQS3 549 aa6.92□□□□□ -1.3
LINC00390-201ENST00000432331 ZC4H2Q9NQZ6 224 aa6.92□□□□□ -1.3
LINC00390-201ENST00000432331 ZNF302Q9NR11 478 aa6.92□□□□□ -1.3
LINC00390-201ENST00000432331 PAK1IP1Q9NWT1 392 aaPredicted RBP6.92□□□□□ -1.3
LINC00390-201ENST00000432331 B3GNT2Q9NY97 397 aa6.92□□□□□ -1.3
LINC00390-201ENST00000432331 TXNDC16Q9P2K2 825 aa6.92□□□□□ -1.3
LINC00390-201ENST00000432331 GABBR1Q9UBS5 961 aa6.92□□□□□ -1.3
LINC00390-201ENST00000432331 KIAA1024Q9UPX6 916 aa6.92□□□□□ -1.3
LINC00390-201ENST00000432331 Q9Y3F1 56 aa6.92□□□□□ -1.3
LINC00390-201ENST00000432331 PTCH2Q9Y6C5 1203 aa6.92□□□□□ -1.3
LINC00390-201ENST00000432331 IGKV6D-21A0A0A0MT36 114 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 A0A0B4J269 797 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 A0A1W2PPM1 405 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 HNRNPCL2B2RXH8 293 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 E7ESA3 106 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 F8W810 466 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 H3BMM5 538 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 TRIM38O00635 465 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 PDXKO00764 312 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 RAD51BO15315 384 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 PHGDHO43175 533 aaKnown RBP6.91□□□□□ -1.3
LINC00390-201ENST00000432331 PSTPIP1O43586 416 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 NOS1APO75052 506 aaPredicted RBP6.91□□□□□ -1.3
LINC00390-201ENST00000432331 DUSP11O75319 330 aaKnown RBP6.91□□□□□ -1.3
LINC00390-201ENST00000432331 TRIM3O75382 744 aaPredicted RBP6.91□□□□□ -1.3
LINC00390-201ENST00000432331 TADA2AO75478 443 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 UPK1BO75841 260 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 FGF18O76093 207 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 OR7A10O76100 309 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 SLITRK3O94933 977 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 SNX4O95219 450 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 ATG7O95352 703 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 HLA-DRAP01903 254 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 LGALS2P05162 132 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 MMP3P08254 477 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 SNRPAP09012 282 aaKnown RBP6.91□□□□□ -1.3
LINC00390-201ENST00000432331 DLATP10515 647 aaKnown RBP6.91□□□□□ -1.3
LINC00390-201ENST00000432331 MBL2P11226 248 aaPredicted RBP6.91□□□□□ -1.3
LINC00390-201ENST00000432331 ZNF182P17025 639 aaPredicted RBP6.91□□□□□ -1.3
LINC00390-201ENST00000432331 BTF3P20290 206 aaKnown RBP6.91□□□□□ -1.3
LINC00390-201ENST00000432331 NR4A1P22736 598 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 DNAJB2P25686 324 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 SLC7A1P30825 629 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 YWHABP31946 246 aaKnown RBP6.91□□□□□ -1.3
LINC00390-201ENST00000432331 RPL9P32969 192 aaKnown RBP6.91□□□□□ -1.3
LINC00390-201ENST00000432331 HTR7P34969 479 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 ARL1P40616 181 aaPredicted RBP6.91□□□□□ -1.3
LINC00390-201ENST00000432331 NR4A2P43354 598 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 MAGEA11P43364 429 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 HCAR3P49019 387 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 NUMBP49757 651 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 STAT5BP51692 787 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 PRKAA2P54646 552 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 EIF3EP60228 445 aaKnown RBP6.91□□□□□ -1.3
LINC00390-201ENST00000432331 SSTP61278 116 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 MRPS22P82650 360 aaKnown RBP6.91□□□□□ -1.3
LINC00390-201ENST00000432331 MPP1Q00013 466 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 OTUD4Q01804 1114 aaKnown RBP6.91□□□□□ -1.3
LINC00390-201ENST00000432331 BST1Q10588 318 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 BFSP1Q12934 665 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 RALGDSQ12967 914 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 BNIP2Q12982 314 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 PMS2P3Q13401 168 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 TUBB3Q13509 450 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 GK3PQ14409 553 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 UGCGQ16739 394 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 DDR2Q16832 855 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 XKR3Q5GH77 459 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 PIGGQ5H8A4 983 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 NHSL2Q5HYW2 709 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 ZNF484Q5JVG2 852 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 BRMS1LQ5PSV4 323 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 PERM1Q5SV97 790 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 TTC39BQ5VTQ0 682 aaPredicted RBP6.91□□□□□ -1.3
LINC00390-201ENST00000432331 LMBRD2Q68DH5 695 aaPredicted RBP6.91□□□□□ -1.3
LINC00390-201ENST00000432331 PDPK2PQ6A1A2 396 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 SWSAP1Q6NVH7 229 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 PPP1R2P3Q6NXS1 205 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 PAOXQ6QHF9 649 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 ZNF600Q6ZNG1 722 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 SPATC1Q76KD6 591 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 METTL3Q86U44 580 aaKnown RBP6.91□□□□□ -1.3
LINC00390-201ENST00000432331 RETREG3Q86VR2 466 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 SLC22A16Q86VW1 577 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 SNX32Q86XE0 403 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 RNF135Q8IUD6 432 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 GLYCTKQ8IVS8 523 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 ARHGEF19Q8IW93 802 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 ZC3H7AQ8IWR0 971 aaKnown RBP6.91□□□□□ -1.3
LINC00390-201ENST00000432331 C4orf19Q8IY42 314 aa6.91□□□□□ -1.3
LINC00390-201ENST00000432331 CLIP4Q8N3C7 705 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms