RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 TFAP4Q01664 338 aa2.25□□□□□ -2.05
CDC40-204ENST00000431461 FAM27E3Q08E93 113 aa2.25□□□□□ -2.05
CDC40-204ENST00000431461 GALNT2Q10471 571 aa2.25□□□□□ -2.05
CDC40-204ENST00000431461 LRMPQ12912 555 aa2.25□□□□□ -2.05
CDC40-204ENST00000431461 RUNX2Q13950 521 aa2.25□□□□□ -2.05
CDC40-204ENST00000431461 PTGR1Q14914 329 aa2.25□□□□□ -2.05
CDC40-204ENST00000431461 RALBP1Q15311 655 aa2.25□□□□□ -2.05
CDC40-204ENST00000431461 PRICKLE4Q2TBC4 344 aa2.25□□□□□ -2.05
CDC40-204ENST00000431461 PRTGQ2VWP7 1150 aa2.25□□□□□ -2.05
CDC40-204ENST00000431461 PPP6R3Q5H9R7 873 aaPredicted RBP2.25□□□□□ -2.05
CDC40-204ENST00000431461 HYIQ5T013 277 aa2.25□□□□□ -2.05
CDC40-204ENST00000431461 TBC1D9BQ66K14 1250 aa2.25□□□□□ -2.05
CDC40-204ENST00000431461 FAM122CQ6P4D5 195 aa2.25□□□□□ -2.05
CDC40-204ENST00000431461 TMEM154Q6P9G4 183 aa2.25□□□□□ -2.05
CDC40-204ENST00000431461 SLC22A25Q6T423 547 aa2.25□□□□□ -2.05
CDC40-204ENST00000431461 C17orf99Q6UX52 265 aa2.25□□□□□ -2.05
CDC40-204ENST00000431461 ATF7IPQ6VMQ6 1270 aa2.25□□□□□ -2.05
CDC40-204ENST00000431461 FAM83HQ6ZRV2 1179 aaPredicted RBP2.25□□□□□ -2.05
CDC40-204ENST00000431461 TBC1D26Q86UD7 250 aa2.25□□□□□ -2.05
CDC40-204ENST00000431461 FAM160B2Q86V87 743 aa2.25□□□□□ -2.05
CDC40-204ENST00000431461 CHD1LQ86WJ1 897 aa2.25□□□□□ -2.05
CDC40-204ENST00000431461 SFTPA2Q8IWL1 248 aa2.25□□□□□ -2.05
CDC40-204ENST00000431461 FAM217AQ8IXS0 508 aa2.25□□□□□ -2.05
CDC40-204ENST00000431461 RBFAQ8N0V3 343 aa2.25□□□□□ -2.05
CDC40-204ENST00000431461 TEX45Q8NA69 505 aa2.25□□□□□ -2.05
CDC40-204ENST00000431461 OR4N2Q8NGD1 307 aa2.25□□□□□ -2.05
CDC40-204ENST00000431461 TMEM174Q8WUU8 243 aa2.25□□□□□ -2.05
CDC40-204ENST00000431461 NUDCD2Q8WVJ2 157 aa2.25□□□□□ -2.05
CDC40-204ENST00000431461 IP6K1Q92551 441 aa2.25□□□□□ -2.05
CDC40-204ENST00000431461 HARBI1Q96MB7 349 aa2.25□□□□□ -2.05
CDC40-204ENST00000431461 MAP7D2Q96T17 732 aa2.25□□□□□ -2.05
CDC40-204ENST00000431461 NCAPGQ9BPX3 1015 aa2.25□□□□□ -2.05
CDC40-204ENST00000431461 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP2.25□□□□□ -2.05
CDC40-204ENST00000431461 HERC2P3Q9BVR0 1158 aa2.25□□□□□ -2.05
CDC40-204ENST00000431461 PHF7Q9BWX1 381 aaPredicted RBP2.25□□□□□ -2.05
CDC40-204ENST00000431461 RBM38Q9H0Z9 239 aaKnown RBP2.25□□□□□ -2.05
CDC40-204ENST00000431461 BRF2Q9HAW0 419 aa2.25□□□□□ -2.05
CDC40-204ENST00000431461 SMYD2Q9NRG4 433 aa2.25□□□□□ -2.05
CDC40-204ENST00000431461 OLA1Q9NTK5 396 aaKnown RBP2.25□□□□□ -2.05
CDC40-204ENST00000431461 EHD2Q9NZN4 543 aa2.25□□□□□ -2.05
CDC40-204ENST00000431461 NCKIPSDQ9NZQ3 722 aa2.25□□□□□ -2.05
CDC40-204ENST00000431461 PEMTQ9UBM1 199 aa2.25□□□□□ -2.05
CDC40-204ENST00000431461 UBA2Q9UBT2 640 aaPredicted RBP2.25□□□□□ -2.05
CDC40-204ENST00000431461 WNT16Q9UBV4 365 aa2.25□□□□□ -2.05
CDC40-204ENST00000431461 SARDHQ9UL12 918 aa2.25□□□□□ -2.05
CDC40-204ENST00000431461 RPS10-NUDT3A0A1W2PQS6 291 aa2.24□□□□□ -2.05
CDC40-204ENST00000431461 OR6C75A6NL08 312 aa2.24□□□□□ -2.05
CDC40-204ENST00000431461 EIF3CLB5ME19 914 aaKnown RBP2.24□□□□□ -2.05
CDC40-204ENST00000431461 STMND1H3BQB6 276 aa2.24□□□□□ -2.05
CDC40-204ENST00000431461 CHL1O00533 1208 aa2.24□□□□□ -2.05
CDC40-204ENST00000431461 HSPB6O14558 160 aa2.24□□□□□ -2.05
CDC40-204ENST00000431461 WNT9BO14905 357 aa2.24□□□□□ -2.05
CDC40-204ENST00000431461 SCAMP1O15126 338 aa2.24□□□□□ -2.05
CDC40-204ENST00000431461 GAGE7O76087 117 aa2.24□□□□□ -2.05
CDC40-204ENST00000431461 NDUFB8O95169 186 aa2.24□□□□□ -2.05
CDC40-204ENST00000431461 MT-CYBP00156 380 aaPredicted RBP2.24□□□□□ -2.05
CDC40-204ENST00000431461 CYP1A2P05177 515 aa2.24□□□□□ -2.05
CDC40-204ENST00000431461 CLEC3BP05452 202 aa2.24□□□□□ -2.05
CDC40-204ENST00000431461 HEXAP06865 529 aa2.24□□□□□ -2.05
CDC40-204ENST00000431461 GALTP07902 379 aa2.24□□□□□ -2.05
CDC40-204ENST00000431461 HOXC6P09630 235 aa2.24□□□□□ -2.05
CDC40-204ENST00000431461 GAGE12FP0CL80 117 aa2.24□□□□□ -2.05
CDC40-204ENST00000431461 GAGE12GP0CL81 117 aa2.24□□□□□ -2.05
CDC40-204ENST00000431461 GAGE12IP0CL82 117 aa2.24□□□□□ -2.05
CDC40-204ENST00000431461 CHRNB2P17787 502 aa2.24□□□□□ -2.05
CDC40-204ENST00000431461 CTPS1P17812 591 aa2.24□□□□□ -2.05
CDC40-204ENST00000431461 ABCD3P28288 659 aa2.24□□□□□ -2.05
CDC40-204ENST00000431461 RFX2P48378 723 aa2.24□□□□□ -2.05
CDC40-204ENST00000431461 CCR9P51686 369 aa2.24□□□□□ -2.05
CDC40-204ENST00000431461 ARF3P61204 181 aaPredicted RBP2.24□□□□□ -2.05
CDC40-204ENST00000431461 UFM1P61960 85 aa2.24□□□□□ -2.05
CDC40-204ENST00000431461 ARF1P84077 181 aaKnown RBP2.24□□□□□ -2.05
CDC40-204ENST00000431461 ADORA2A-AS1P86434 159 aa2.24□□□□□ -2.05
CDC40-204ENST00000431461 MPP1Q00013 466 aa2.24□□□□□ -2.05
CDC40-204ENST00000431461 EGR4Q05215 589 aa2.24□□□□□ -2.05
CDC40-204ENST00000431461 ZBTB16Q05516 673 aa2.24□□□□□ -2.05
CDC40-204ENST00000431461 GAGE1Q13065 139 aa2.24□□□□□ -2.05
CDC40-204ENST00000431461 GAGE4Q13068 117 aa2.24□□□□□ -2.05
CDC40-204ENST00000431461 G3BP1Q13283 466 aaKnown RBP eCLIP2.24□□□□□ -2.05
CDC40-204ENST00000431461 ITGADQ13349 1161 aa2.24□□□□□ -2.05
CDC40-204ENST00000431461 OLIG2Q13516 323 aa2.24□□□□□ -2.05
CDC40-204ENST00000431461 PDE1CQ14123 709 aaPredicted RBP2.24□□□□□ -2.05
CDC40-204ENST00000431461 KEAP1Q14145 624 aa2.24□□□□□ -2.05
CDC40-204ENST00000431461 NEDD9Q14511 834 aa2.24□□□□□ -2.05
CDC40-204ENST00000431461 NFATC4Q14934 902 aa2.24□□□□□ -2.05
CDC40-204ENST00000431461 DUSP6Q16828 381 aa2.24□□□□□ -2.05
CDC40-204ENST00000431461 TCTN1Q2MV58 587 aa2.24□□□□□ -2.05
CDC40-204ENST00000431461 DPCR1Q3MIW9 517 aa2.24□□□□□ -2.05
CDC40-204ENST00000431461 SYTL3Q4VX76 610 aa2.24□□□□□ -2.05
CDC40-204ENST00000431461 FSCBQ5H9T9 825 aa2.24□□□□□ -2.05
CDC40-204ENST00000431461 SH2D4BQ5SQS7 431 aa2.24□□□□□ -2.05
CDC40-204ENST00000431461 FAM69AQ5T7M9 428 aa2.24□□□□□ -2.05
CDC40-204ENST00000431461 DCAF12L2Q5VW00 463 aa2.24□□□□□ -2.05
CDC40-204ENST00000431461 HIST2H2BCQ6DN03 193 aa2.24□□□□□ -2.05
CDC40-204ENST00000431461 HMBOX1Q6NT76 420 aa2.24□□□□□ -2.05
CDC40-204ENST00000431461 TMTC3Q6ZXV5 915 aa2.24□□□□□ -2.05
CDC40-204ENST00000431461 BRINP3Q76B58 766 aa2.24□□□□□ -2.05
CDC40-204ENST00000431461 TRILQ7L0X0 811 aa2.24□□□□□ -2.05
CDC40-204ENST00000431461 RNF144BQ7Z419 303 aa2.24□□□□□ -2.05
CDC40-204ENST00000431461 MAATS1Q7Z4T9 603 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms