RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 MACC1Q6ZN28 852 aa16.73■□□□□ 0.27
VARS-216ENST00000428445 KYQ8NBH2 561 aa16.73■□□□□ 0.27
VARS-216ENST00000428445 OSBPL1AQ9BXW6 950 aa16.73■□□□□ 0.27
VARS-216ENST00000428445 NCKIPSDQ9NZQ3 722 aa16.73■□□□□ 0.27
VARS-216ENST00000428445 OR1A2Q9Y585 309 aa16.73■□□□□ 0.27
VARS-216ENST00000428445 PCDHGA8Q9Y5G5 932 aa16.73■□□□□ 0.27
VARS-216ENST00000428445 COL6A6A6NMZ7 2263 aa16.73■□□□□ 0.27
VARS-216ENST00000428445 UNC13CQ8NB66 2214 aa16.73■□□□□ 0.27
VARS-216ENST00000428445 CYSRT1A8MQ03 144 aa16.72■□□□□ 0.27
VARS-216ENST00000428445 J3QKU1 62 aa16.72■□□□□ 0.27
VARS-216ENST00000428445 K7ENP7 123 aa16.72■□□□□ 0.27
VARS-216ENST00000428445 CREB3O43889 395 aa16.72■□□□□ 0.27
VARS-216ENST00000428445 KRT3P12035 628 aa16.72■□□□□ 0.27
VARS-216ENST00000428445 UNGP13051 313 aaPredicted RBP16.72■□□□□ 0.27
VARS-216ENST00000428445 PTPN9P43378 593 aa16.72■□□□□ 0.27
VARS-216ENST00000428445 RPIAP49247 311 aa16.72■□□□□ 0.27
VARS-216ENST00000428445 GEMIN4P57678 1058 aaKnown RBP16.72■□□□□ 0.27
VARS-216ENST00000428445 RHOAP61586 193 aa16.72■□□□□ 0.27
VARS-216ENST00000428445 YPEL5P62699 121 aa16.72■□□□□ 0.27
VARS-216ENST00000428445 SPIDRQ14159 915 aa16.72■□□□□ 0.27
VARS-216ENST00000428445 TGIF1Q15583 401 aa16.72■□□□□ 0.27
VARS-216ENST00000428445 INO80CQ6PI98 192 aaPredicted RBP16.72■□□□□ 0.27
VARS-216ENST00000428445 WDR59Q6PJI9 974 aa16.72■□□□□ 0.27
VARS-216ENST00000428445 IGF2-ASQ6U949 168 aa16.72■□□□□ 0.27
VARS-216ENST00000428445 STRADAQ7RTN6 431 aa16.72■□□□□ 0.27
VARS-216ENST00000428445 ZNF677Q86XU0 584 aa16.72■□□□□ 0.27
VARS-216ENST00000428445 SDR16C5Q8N3Y7 309 aa16.72■□□□□ 0.27
VARS-216ENST00000428445 TPCN2Q8NHX9 752 aa16.72■□□□□ 0.27
VARS-216ENST00000428445 WDR36Q8NI36 951 aaKnown RBP16.72■□□□□ 0.27
VARS-216ENST00000428445 PCDH19Q8TAB3 1148 aa16.72■□□□□ 0.27
VARS-216ENST00000428445 GLMNQ92990 594 aa16.72■□□□□ 0.27
VARS-216ENST00000428445 FUBP1Q96AE4 644 aaKnown RBP16.72■□□□□ 0.27
VARS-216ENST00000428445 CCDC74AQ96AQ1 378 aa16.72■□□□□ 0.27
VARS-216ENST00000428445 GDAP1L1Q96MZ0 367 aa16.72■□□□□ 0.27
VARS-216ENST00000428445 FAM207AQ9NSI2 230 aaPredicted RBP16.72■□□□□ 0.27
VARS-216ENST00000428445 LHX3Q9UBR4 397 aa16.72■□□□□ 0.27
VARS-216ENST00000428445 DOLKQ9UPQ8 538 aa16.72■□□□□ 0.27
VARS-216ENST00000428445 PIEZO2Q9H5I5 2752 aa16.72■□□□□ 0.27
VARS-216ENST00000428445 LRP4O75096 1905 aa16.72■□□□□ 0.27
VARS-216ENST00000428445 A0A1W2PQM1 296 aa16.71■□□□□ 0.27
VARS-216ENST00000428445 RASA4BC9J798 803 aa16.71■□□□□ 0.27
VARS-216ENST00000428445 NTN3O00634 580 aaPredicted RBP16.71■□□□□ 0.27
VARS-216ENST00000428445 RIOK3O14730 519 aaKnown RBP16.71■□□□□ 0.27
VARS-216ENST00000428445 RASA4O43374 803 aa16.71■□□□□ 0.27
VARS-216ENST00000428445 BUB1BO60566 1050 aaPredicted RBP16.71■□□□□ 0.27
VARS-216ENST00000428445 TCEA3O75764 348 aa16.71■□□□□ 0.27
VARS-216ENST00000428445 IGSF6O95976 241 aa16.71■□□□□ 0.27
VARS-216ENST00000428445 CTSEP14091 401 aa16.71■□□□□ 0.27
VARS-216ENST00000428445 GPD1P21695 349 aa16.71■□□□□ 0.27
VARS-216ENST00000428445 EPHB2P29323 1055 aa16.71■□□□□ 0.27
VARS-216ENST00000428445 SOX5P35711 763 aa16.71■□□□□ 0.27
VARS-216ENST00000428445 HK3P52790 923 aa16.71■□□□□ 0.27
VARS-216ENST00000428445 JAM2P57087 298 aa16.71■□□□□ 0.27
VARS-216ENST00000428445 INPP5AQ14642 412 aa16.71■□□□□ 0.27
VARS-216ENST00000428445 LRRC14Q15048 493 aa16.71■□□□□ 0.27
VARS-216ENST00000428445 TMEM52BQ4KMG9 183 aa16.71■□□□□ 0.27
VARS-216ENST00000428445 ESRP1Q6NXG1 681 aaKnown RBP16.71■□□□□ 0.27
VARS-216ENST00000428445 CCDC81Q6ZN84 652 aa16.71■□□□□ 0.27
VARS-216ENST00000428445 SLFN11Q7Z7L1 901 aa16.71■□□□□ 0.27
VARS-216ENST00000428445 ZSWIM9Q86XI8 627 aa16.71■□□□□ 0.27
VARS-216ENST00000428445 ARL14Q8N4G2 192 aa16.71■□□□□ 0.27
VARS-216ENST00000428445 RTL3Q8N8U3 475 aaKnown RBP16.71■□□□□ 0.27
VARS-216ENST00000428445 PLA2G15Q8NCC3 412 aa16.71■□□□□ 0.27
VARS-216ENST00000428445 ARHGEF26Q96DR7 871 aa16.71■□□□□ 0.27
VARS-216ENST00000428445 APOOQ9BUR5 198 aa16.71■□□□□ 0.27
VARS-216ENST00000428445 SELENOOQ9BVL4 669 aa16.71■□□□□ 0.27
VARS-216ENST00000428445 EDEM3Q9BZQ6 932 aa16.71■□□□□ 0.27
VARS-216ENST00000428445 EPB41L5Q9HCM4 733 aa16.71■□□□□ 0.27
VARS-216ENST00000428445 ADAM22Q9P0K1 906 aa16.71■□□□□ 0.27
VARS-216ENST00000428445 CCDC187A0A096LP49 1063 aa16.7■□□□□ 0.26
VARS-216ENST00000428445 J3KR12 359 aa16.7■□□□□ 0.26
VARS-216ENST00000428445 CCP110O43303 1012 aa16.7■□□□□ 0.26
VARS-216ENST00000428445 PCCBP05166 539 aa16.7■□□□□ 0.26
VARS-216ENST00000428445 C6P13671 934 aa16.7■□□□□ 0.26
VARS-216ENST00000428445 RAD51Q06609 339 aa16.7■□□□□ 0.26
VARS-216ENST00000428445 Q8N9G6 341 aaPredicted RBP16.7■□□□□ 0.26
VARS-216ENST00000428445 SNRNP27Q8WVK2 155 aaKnown RBP16.7■□□□□ 0.26
VARS-216ENST00000428445 NAT6Q93015 286 aa16.7■□□□□ 0.26
VARS-216ENST00000428445 WBP1Q96G27 269 aa16.7■□□□□ 0.26
VARS-216ENST00000428445 PCDH12Q9NPG4 1184 aa16.7■□□□□ 0.26
VARS-216ENST00000428445 GPATCH2LQ9NWQ4 482 aa16.7■□□□□ 0.26
VARS-216ENST00000428445 ATXN7L1Q9ULK2 861 aaPredicted RBP16.7■□□□□ 0.26
VARS-216ENST00000428445 GPR34Q9UPC5 381 aa16.7■□□□□ 0.26
VARS-216ENST00000428445 MFHAS1Q9Y4C4 1052 aa16.7■□□□□ 0.26
VARS-216ENST00000428445 DAAM1Q9Y4D1 1078 aa16.7■□□□□ 0.26
VARS-216ENST00000428445 RPLP0P05388 317 aaKnown RBP16.69■□□□□ 0.26
VARS-216ENST00000428445 XPAP23025 273 aaPredicted RBP16.69■□□□□ 0.26
VARS-216ENST00000428445 EEF1GP26641 437 aaKnown RBP16.69■□□□□ 0.26
VARS-216ENST00000428445 SLC5A2P31639 672 aa16.69■□□□□ 0.26
VARS-216ENST00000428445 RGRP47804 291 aa16.69■□□□□ 0.26
VARS-216ENST00000428445 LIG3P49916 1009 aa16.69■□□□□ 0.26
VARS-216ENST00000428445 SRP54P61011 504 aaKnown RBP16.69■□□□□ 0.26
VARS-216ENST00000428445 RPL7AP62424 266 aaKnown RBP16.69■□□□□ 0.26
VARS-216ENST00000428445 SERINC3Q13530 473 aa16.69■□□□□ 0.26
VARS-216ENST00000428445 KRT31Q15323 416 aa16.69■□□□□ 0.26
VARS-216ENST00000428445 CLEC14AQ86T13 490 aa16.69■□□□□ 0.26
VARS-216ENST00000428445 JAMLQ86YT9 394 aa16.69■□□□□ 0.26
VARS-216ENST00000428445 CAMK1DQ8IU85 385 aa16.69■□□□□ 0.26
VARS-216ENST00000428445 FBXO39Q8N4B4 442 aa16.69■□□□□ 0.26
VARS-216ENST00000428445 ARL10Q8N8L6 244 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms