RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 MGME1Q9BQP7 344 aa18.07■□□□□ 0.48
IGHV3-47-201ENST00000425060 ATP13A3Q9H7F0 1226 aa18.07■□□□□ 0.48
IGHV3-47-201ENST00000425060 TFR2Q9UP52 801 aa18.07■□□□□ 0.48
IGHV3-47-201ENST00000425060 PCDHA13Q9Y5I0 950 aa18.07■□□□□ 0.48
IGHV3-47-201ENST00000425060 TTC24A2A3L6 582 aaPredicted RBP18.06■□□□□ 0.48
IGHV3-47-201ENST00000425060 POM121BA6NF01 834 aa18.06■□□□□ 0.48
IGHV3-47-201ENST00000425060 RIOK3O14730 519 aaKnown RBP18.06■□□□□ 0.48
IGHV3-47-201ENST00000425060 YKT6O15498 198 aa18.06■□□□□ 0.48
IGHV3-47-201ENST00000425060 MMP20O60882 483 aa18.06■□□□□ 0.48
IGHV3-47-201ENST00000425060 EPHA8P29322 1005 aaPredicted RBP18.06■□□□□ 0.48
IGHV3-47-201ENST00000425060 SERPINA4P29622 427 aa18.06■□□□□ 0.48
IGHV3-47-201ENST00000425060 CYLC1P35663 651 aaPredicted RBP18.06■□□□□ 0.48
IGHV3-47-201ENST00000425060 BNIP3Q12983 259 aa18.06■□□□□ 0.48
IGHV3-47-201ENST00000425060 SGCGQ13326 291 aa18.06■□□□□ 0.48
IGHV3-47-201ENST00000425060 KYAT3Q6YP21 454 aaKnown RBP18.06■□□□□ 0.48
IGHV3-47-201ENST00000425060 TMTC1Q8IUR5 882 aa18.06■□□□□ 0.48
IGHV3-47-201ENST00000425060 SLC22A18ASQ8N1D0 253 aa18.06■□□□□ 0.48
IGHV3-47-201ENST00000425060 DENND6BQ8NEG7 585 aa18.06■□□□□ 0.48
IGHV3-47-201ENST00000425060 RHBDD1Q8TEB9 315 aa18.06■□□□□ 0.48
IGHV3-47-201ENST00000425060 MAML1Q92585 1016 aa18.06■□□□□ 0.48
IGHV3-47-201ENST00000425060 FATE1Q969F0 183 aa18.06■□□□□ 0.48
IGHV3-47-201ENST00000425060 TSGA13Q96PP4 275 aa18.06■□□□□ 0.48
IGHV3-47-201ENST00000425060 NUDCD1Q96RS6 583 aa18.06■□□□□ 0.48
IGHV3-47-201ENST00000425060 PCDH12Q9NPG4 1184 aa18.06■□□□□ 0.48
IGHV3-47-201ENST00000425060 EPN1Q9Y6I3 576 aaPredicted RBP18.06■□□□□ 0.48
IGHV3-47-201ENST00000425060 A0A0A6YYK5 440 aaPredicted RBP18.05■□□□□ 0.48
IGHV3-47-201ENST00000425060 SOWAHDA6NJG2 315 aa18.05■□□□□ 0.48
IGHV3-47-201ENST00000425060 A6NNZ2 444 aa18.05■□□□□ 0.48
IGHV3-47-201ENST00000425060 HTRA2O43464 458 aaPredicted RBP18.05■□□□□ 0.48
IGHV3-47-201ENST00000425060 MAP3K6O95382 1288 aa18.05■□□□□ 0.48
IGHV3-47-201ENST00000425060 COMTP21964 271 aa18.05■□□□□ 0.48
IGHV3-47-201ENST00000425060 CCNCP24863 283 aa18.05■□□□□ 0.48
IGHV3-47-201ENST00000425060 GRK6P43250 576 aa18.05■□□□□ 0.48
IGHV3-47-201ENST00000425060 MMP13P45452 471 aa18.05■□□□□ 0.48
IGHV3-47-201ENST00000425060 ARRB1P49407 418 aaPredicted RBP18.05■□□□□ 0.48
IGHV3-47-201ENST00000425060 GBE1Q04446 702 aa18.05■□□□□ 0.48
IGHV3-47-201ENST00000425060 BCL2L1Q07817 233 aa18.05■□□□□ 0.48
IGHV3-47-201ENST00000425060 ELP6Q0PNE2 266 aa18.05■□□□□ 0.48
IGHV3-47-201ENST00000425060 ZNF235Q14590 738 aa18.05■□□□□ 0.48
IGHV3-47-201ENST00000425060 MARC1Q5VT66 337 aa18.05■□□□□ 0.48
IGHV3-47-201ENST00000425060 SLC9A4Q6AI14 798 aa18.05■□□□□ 0.48
IGHV3-47-201ENST00000425060 Q6ZSR6 202 aa18.05■□□□□ 0.48
IGHV3-47-201ENST00000425060 GATAD2AQ86YP4 633 aa18.05■□□□□ 0.48
IGHV3-47-201ENST00000425060 PLD5Q8N7P1 536 aa18.05■□□□□ 0.48
IGHV3-47-201ENST00000425060 DTLQ9NZJ0 730 aa18.05■□□□□ 0.48
IGHV3-47-201ENST00000425060 HYOU1Q9Y4L1 999 aa18.05■□□□□ 0.48
IGHV3-47-201ENST00000425060 PCDHB9Q9Y5E1 797 aa18.05■□□□□ 0.48
IGHV3-47-201ENST00000425060 ANKRD36A6QL64 1941 aa18.04■□□□□ 0.48
IGHV3-47-201ENST00000425060 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.04■□□□□ 0.48
IGHV3-47-201ENST00000425060 LRRD1A4D1F6 860 aa18.04■□□□□ 0.48
IGHV3-47-201ENST00000425060 RCCD1A6NED2 376 aa18.04■□□□□ 0.48
IGHV3-47-201ENST00000425060 MATN3O15232 486 aa18.04■□□□□ 0.48
IGHV3-47-201ENST00000425060 TM7SF2O76062 418 aa18.04■□□□□ 0.48
IGHV3-47-201ENST00000425060 NDUFA10O95299 355 aa18.04■□□□□ 0.48
IGHV3-47-201ENST00000425060 XPAP23025 273 aaPredicted RBP18.04■□□□□ 0.48
IGHV3-47-201ENST00000425060 MMP12P39900 470 aa18.04■□□□□ 0.48
IGHV3-47-201ENST00000425060 PFN3P60673 137 aa18.04■□□□□ 0.48
IGHV3-47-201ENST00000425060 MAXP61244 160 aa18.04■□□□□ 0.48
IGHV3-47-201ENST00000425060 AGERQ15109 404 aa18.04■□□□□ 0.48
IGHV3-47-201ENST00000425060 SPA17Q15506 151 aa18.04■□□□□ 0.48
IGHV3-47-201ENST00000425060 IFI16Q16666 785 aaKnown RBP18.04■□□□□ 0.48
IGHV3-47-201ENST00000425060 RALGPS1Q5JS13 557 aa18.04■□□□□ 0.48
IGHV3-47-201ENST00000425060 RAD9BQ6WBX8 426 aa18.04■□□□□ 0.48
IGHV3-47-201ENST00000425060 DCP2Q8IU60 420 aaKnown RBP18.04■□□□□ 0.48
IGHV3-47-201ENST00000425060 RHOT1Q8IXI2 618 aa18.04■□□□□ 0.48
IGHV3-47-201ENST00000425060 TP53I13Q8NBR0 393 aaPredicted RBP18.04■□□□□ 0.48
IGHV3-47-201ENST00000425060 CXorf40AQ8TE69 158 aa18.04■□□□□ 0.48
IGHV3-47-201ENST00000425060 CDC6Q99741 560 aa18.04■□□□□ 0.48
IGHV3-47-201ENST00000425060 WRAP53Q9BUR4 548 aaKnown RBP18.04■□□□□ 0.48
IGHV3-47-201ENST00000425060 NOD2Q9HC29 1040 aa18.04■□□□□ 0.48
IGHV3-47-201ENST00000425060 TOR4AQ9NXH8 423 aa18.04■□□□□ 0.48
IGHV3-47-201ENST00000425060 SALL4Q9UJQ4 1053 aa18.04■□□□□ 0.48
IGHV3-47-201ENST00000425060 ATP8A1Q9Y2Q0 1164 aa18.04■□□□□ 0.48
IGHV3-47-201ENST00000425060 REXO2Q9Y3B8 237 aaKnown RBP18.04■□□□□ 0.48
IGHV3-47-201ENST00000425060 ALG6Q9Y672 507 aa18.04■□□□□ 0.48
IGHV3-47-201ENST00000425060 SHROOM3Q8TF72 1996 aa18.04■□□□□ 0.48
IGHV3-47-201ENST00000425060 CFAP69A5D8W1 941 aa18.03■□□□□ 0.48
IGHV3-47-201ENST00000425060 FPGTO14772 594 aa18.03■□□□□ 0.48
IGHV3-47-201ENST00000425060 DKK1O94907 266 aa18.03■□□□□ 0.48
IGHV3-47-201ENST00000425060 TOP3BO95985 862 aaKnown RBP18.03■□□□□ 0.48
IGHV3-47-201ENST00000425060 PRKCGP05129 697 aa18.03■□□□□ 0.48
IGHV3-47-201ENST00000425060 ITGAVP06756 1048 aa18.03■□□□□ 0.48
IGHV3-47-201ENST00000425060 FTH1P19P0C7X4 201 aa18.03■□□□□ 0.48
IGHV3-47-201ENST00000425060 CDC25BP30305 580 aa18.03■□□□□ 0.48
IGHV3-47-201ENST00000425060 NOP2P46087 812 aaKnown RBP18.03■□□□□ 0.48
IGHV3-47-201ENST00000425060 RALGDSQ12967 914 aa18.03■□□□□ 0.48
IGHV3-47-201ENST00000425060 TAZQ16635 292 aa18.03■□□□□ 0.48
IGHV3-47-201ENST00000425060 TPRG1LQ5T0D9 272 aa18.03■□□□□ 0.48
IGHV3-47-201ENST00000425060 ZFYVE27Q5T4F4 411 aa18.03■□□□□ 0.48
IGHV3-47-201ENST00000425060 ALG1LQ6GMV1 187 aa18.03■□□□□ 0.48
IGHV3-47-201ENST00000425060 KDM7AQ6ZMT4 941 aa18.03■□□□□ 0.48
IGHV3-47-201ENST00000425060 SLCO6A1Q86UG4 719 aa18.03■□□□□ 0.48
IGHV3-47-201ENST00000425060 TMEM139Q8IV31 216 aa18.03■□□□□ 0.48
IGHV3-47-201ENST00000425060 BBS5Q8N3I7 341 aa18.03■□□□□ 0.48
IGHV3-47-201ENST00000425060 NSMCE1Q8WV22 266 aa18.03■□□□□ 0.48
IGHV3-47-201ENST00000425060 HDAC11Q96DB2 347 aa18.03■□□□□ 0.48
IGHV3-47-201ENST00000425060 IFT43Q96FT9 208 aa18.03■□□□□ 0.48
IGHV3-47-201ENST00000425060 GOLPH3Q9H4A6 298 aa18.03■□□□□ 0.48
IGHV3-47-201ENST00000425060 CAAP1Q9H8G2 361 aa18.03■□□□□ 0.48
IGHV3-47-201ENST00000425060 MBNL1Q9NR56 388 aaKnown RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms