RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 SYT13Q7L8C5 426 aa3.56□□□□□ -1.84
SDCBPP3-201ENST00000419629 NR2C2APQ86WQ0 139 aa3.56□□□□□ -1.84
SDCBPP3-201ENST00000419629 CAMK1DQ8IU85 385 aa3.56□□□□□ -1.84
SDCBPP3-201ENST00000419629 ITPRIPQ8IWB1 547 aa3.56□□□□□ -1.84
SDCBPP3-201ENST00000419629 EXOC8Q8IYI6 725 aa3.56□□□□□ -1.84
SDCBPP3-201ENST00000419629 DPP10Q8N608 796 aa3.56□□□□□ -1.84
SDCBPP3-201ENST00000419629 CNNM3Q8NE01 707 aa3.56□□□□□ -1.84
SDCBPP3-201ENST00000419629 C17orf50Q8WW18 174 aa3.56□□□□□ -1.84
SDCBPP3-201ENST00000419629 KCNJ9Q92806 393 aa3.56□□□□□ -1.84
SDCBPP3-201ENST00000419629 ZKSCAN4Q969J2 545 aaPredicted RBP3.56□□□□□ -1.84
SDCBPP3-201ENST00000419629 CCDC47Q96A33 483 aaKnown RBP3.56□□□□□ -1.84
SDCBPP3-201ENST00000419629 PPP1R13BQ96KQ4 1090 aa3.56□□□□□ -1.84
SDCBPP3-201ENST00000419629 ZNF396Q96N95 335 aaPredicted RBP3.56□□□□□ -1.84
SDCBPP3-201ENST00000419629 LZTS2Q9BRK4 669 aa3.56□□□□□ -1.84
SDCBPP3-201ENST00000419629 HERPUD2Q9BSE4 406 aa3.56□□□□□ -1.84
SDCBPP3-201ENST00000419629 IFT27Q9BW83 186 aa3.56□□□□□ -1.84
SDCBPP3-201ENST00000419629 FUT8Q9BYC5 575 aa3.56□□□□□ -1.84
SDCBPP3-201ENST00000419629 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.56□□□□□ -1.84
SDCBPP3-201ENST00000419629 NAT10Q9H0A0 1025 aaKnown RBP3.56□□□□□ -1.84
SDCBPP3-201ENST00000419629 RBM38Q9H0Z9 239 aaKnown RBP3.56□□□□□ -1.84
SDCBPP3-201ENST00000419629 ABHD16BQ9H3Z7 469 aa3.56□□□□□ -1.84
SDCBPP3-201ENST00000419629 VIPAS39Q9H9C1 493 aa3.56□□□□□ -1.84
SDCBPP3-201ENST00000419629 ACTR5Q9H9F9 607 aaPredicted RBP3.56□□□□□ -1.84
SDCBPP3-201ENST00000419629 SRP68Q9UHB9 627 aaKnown RBP3.56□□□□□ -1.84
SDCBPP3-201ENST00000419629 KCND3Q9UK17 655 aa3.56□□□□□ -1.84
SDCBPP3-201ENST00000419629 PCDHA12Q9UN75 941 aa3.56□□□□□ -1.84
SDCBPP3-201ENST00000419629 COG5Q9UP83 839 aa3.56□□□□□ -1.84
SDCBPP3-201ENST00000419629 FAM169AQ9Y6X4 670 aa3.56□□□□□ -1.84
SDCBPP3-201ENST00000419629 EIF4G3O43432 1585 aaKnown RBP3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 CEP170Q5SW79 1584 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 ADGRL1O94910 1474 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 CFTRP13569 1480 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 ERCC6Q03468 1493 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 IQSEC2Q5JU85 1478 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 DAPK1P53355 1430 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 NPHP3Q7Z494 1330 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 TTC21BQ7Z4L5 1316 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 ZNF644Q9H582 1327 aaPredicted RBP3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 SAC3D1A6NKF1 404 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 ZNF814B7Z6K7 855 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 H3BQF6 201 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 IFRD1O00458 451 aaPredicted RBP3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 SYN3O14994 580 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 NPHP1O15259 732 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 AP5Z1O43299 807 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 SHOX2O60902 331 aaPredicted RBP3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 SEC31AO94979 1220 aaKnown RBP3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 NDUFB8O95169 186 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 KLKB1P03952 638 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 TK1P04183 234 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 DHRS4L1P0CG22 281 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 CYP4B1P13584 511 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 PLA2G2AP14555 144 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 CHN1P15882 459 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 FERP16591 822 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 SLC16A2P36021 539 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 PEX19P40855 299 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 PNPLA4P41247 253 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 PAPOLAP51003 745 aaKnown RBP3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 ARL4CP56559 192 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 CCZ1BP86790 482 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 CCZ1P86791 482 aaPredicted RBP3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 ROR2Q01974 943 aaKnown RBP3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 PDCLQ13371 301 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 DYNC1I2Q13409 638 aaKnown RBP3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 THOC5Q13769 683 aaKnown RBP3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 PTGR1Q14914 329 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 SNCBQ16143 134 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 CCDC57Q2TAC2 916 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 C5orf22Q49AR2 442 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 LRRC23Q53EV4 343 aaPredicted RBP3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 FAM171A1Q5VUB5 890 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 JMJD6Q6NYC1 403 aaPredicted RBP3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 AADACL2Q6P093 401 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 SLC30A9Q6PML9 568 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 ATF7IPQ6VMQ6 1270 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 RTL10Q7L3V2 364 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 RASGRP2Q7LDG7 609 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 KDELC2Q7Z4H8 507 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 SPATA21Q7Z572 469 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 GALNT7Q86SF2 657 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 CCDC25Q86WR0 208 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 TMEM57Q8N5G2 664 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 ANKRD44Q8N8A2 993 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 GBP7Q8N8V2 638 aaPredicted RBP3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 EXD3Q8N9H8 876 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 OR8K1Q8NGG5 319 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 FAM81AQ8TBF8 368 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 AFG1LQ8WV93 481 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 ZFAND2BQ8WV99 257 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 SNRNP27Q8WVK2 155 aaKnown RBP3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 LZICQ8WZA0 190 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 EME1Q96AY2 570 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 THOC1Q96FV9 657 aaKnown RBP3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 ZNF419Q96HQ0 510 aaPredicted RBP3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 LMLNQ96KR4 655 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 ALS2CR12Q96Q35 445 aa3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 SF3B5Q9BWJ5 86 aaKnown RBP3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 CADM1Q9BY67 442 aaKnown RBP3.55□□□□□ -1.84
SDCBPP3-201ENST00000419629 TRIM7Q9C029 511 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms