RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 CFAP58Q5T655 872 aa17.76■□□□□ 0.43
PDLIM2-208ENST00000416159 AFMIDQ63HM1 303 aa17.76■□□□□ 0.43
PDLIM2-208ENST00000416159 ZCCHC8Q6NZY4 707 aaKnown RBP17.76■□□□□ 0.43
PDLIM2-208ENST00000416159 BRAT1Q6PJG6 821 aa17.76■□□□□ 0.43
PDLIM2-208ENST00000416159 SRLQ86TD4 932 aa17.76■□□□□ 0.43
PDLIM2-208ENST00000416159 DCBLD1Q8N8Z6 715 aa17.76■□□□□ 0.43
PDLIM2-208ENST00000416159 TP53I13Q8NBR0 393 aaPredicted RBP17.76■□□□□ 0.43
PDLIM2-208ENST00000416159 HNRNPLLQ8WVV9 542 aaKnown RBP17.76■□□□□ 0.43
PDLIM2-208ENST00000416159 WRAP53Q9BUR4 548 aaKnown RBP17.76■□□□□ 0.43
PDLIM2-208ENST00000416159 TRIM7Q9C029 511 aa17.76■□□□□ 0.43
PDLIM2-208ENST00000416159 SP110Q9HB58 689 aa17.76■□□□□ 0.43
PDLIM2-208ENST00000416159 NCKIPSDQ9NZQ3 722 aa17.76■□□□□ 0.43
PDLIM2-208ENST00000416159 MYO1AQ9UBC5 1043 aa17.76■□□□□ 0.43
PDLIM2-208ENST00000416159 KLF15Q9UIH9 416 aa17.76■□□□□ 0.43
PDLIM2-208ENST00000416159 SALL4Q9UJQ4 1053 aa17.76■□□□□ 0.43
PDLIM2-208ENST00000416159 BZW2Q9Y6E2 419 aaKnown RBP17.76■□□□□ 0.43
PDLIM2-208ENST00000416159 CACNA1GO43497 2377 aa17.75■□□□□ 0.43
PDLIM2-208ENST00000416159 TPP1O14773 563 aa17.75■□□□□ 0.43
PDLIM2-208ENST00000416159 BUB1BO60566 1050 aaPredicted RBP17.75■□□□□ 0.43
PDLIM2-208ENST00000416159 FANCCQ00597 558 aa17.75■□□□□ 0.43
PDLIM2-208ENST00000416159 COL28A1Q2UY09 1125 aa17.75■□□□□ 0.43
PDLIM2-208ENST00000416159 BOLA3Q53S33 107 aa17.75■□□□□ 0.43
PDLIM2-208ENST00000416159 TDRD12Q587J7 1177 aaKnown RBP17.75■□□□□ 0.43
PDLIM2-208ENST00000416159 ERAP2Q6P179 960 aa17.75■□□□□ 0.43
PDLIM2-208ENST00000416159 CYP4V2Q6ZWL3 525 aaPredicted RBP17.75■□□□□ 0.43
PDLIM2-208ENST00000416159 ARHGAP12Q8IWW6 846 aa17.75■□□□□ 0.43
PDLIM2-208ENST00000416159 LZTR1Q8N653 840 aa17.75■□□□□ 0.43
PDLIM2-208ENST00000416159 LMX1AQ8TE12 382 aa17.75■□□□□ 0.43
PDLIM2-208ENST00000416159 SYN2Q92777 582 aaPredicted RBP17.75■□□□□ 0.43
PDLIM2-208ENST00000416159 TBATAQ96M53 351 aa17.75■□□□□ 0.43
PDLIM2-208ENST00000416159 IL12RB2Q99665 862 aa17.75■□□□□ 0.43
PDLIM2-208ENST00000416159 ZWILCHQ9H900 591 aa17.75■□□□□ 0.43
PDLIM2-208ENST00000416159 PCDH12Q9NPG4 1184 aa17.75■□□□□ 0.43
PDLIM2-208ENST00000416159 MBNL1Q9NR56 388 aaKnown RBP17.75■□□□□ 0.43
PDLIM2-208ENST00000416159 CWC15Q9P013 229 aaKnown RBP17.75■□□□□ 0.43
PDLIM2-208ENST00000416159 ZZEF1O43149 2961 aa17.75■□□□□ 0.43
PDLIM2-208ENST00000416159 A0A087WV48 116 aa17.74■□□□□ 0.43
PDLIM2-208ENST00000416159 LY6G6EA0A0G2JKS1 128 aa17.74■□□□□ 0.43
PDLIM2-208ENST00000416159 A0A1W2PQJ5 194 aa17.74■□□□□ 0.43
PDLIM2-208ENST00000416159 TMEM110-MUSTN1A8MSY1 372 aa17.74■□□□□ 0.43
PDLIM2-208ENST00000416159 DFFAO00273 331 aa17.74■□□□□ 0.43
PDLIM2-208ENST00000416159 OPA1O60313 960 aa17.74■□□□□ 0.43
PDLIM2-208ENST00000416159 SERPINA4P29622 427 aa17.74■□□□□ 0.43
PDLIM2-208ENST00000416159 EIF4A3P38919 411 aaKnown RBP17.74■□□□□ 0.43
PDLIM2-208ENST00000416159 PEX5P50542 639 aa17.74■□□□□ 0.43
PDLIM2-208ENST00000416159 IL10RBQ08334 325 aa17.74■□□□□ 0.43
PDLIM2-208ENST00000416159 NSUN2Q08J23 767 aaKnown RBP eCLIP17.74■□□□□ 0.43
PDLIM2-208ENST00000416159 LRRC14Q15048 493 aa17.74■□□□□ 0.43
PDLIM2-208ENST00000416159 KDM7AQ6ZMT4 941 aa17.74■□□□□ 0.43
PDLIM2-208ENST00000416159 MACC1Q6ZN28 852 aa17.74■□□□□ 0.43
PDLIM2-208ENST00000416159 CAMK1DQ8IU85 385 aa17.74■□□□□ 0.43
PDLIM2-208ENST00000416159 PHACTR4Q8IZ21 702 aa17.74■□□□□ 0.43
PDLIM2-208ENST00000416159 TSEN2Q8NCE0 465 aaKnown RBP17.74■□□□□ 0.43
PDLIM2-208ENST00000416159 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.74■□□□□ 0.43
PDLIM2-208ENST00000416159 CINPQ9BW66 212 aaPredicted RBP17.74■□□□□ 0.43
PDLIM2-208ENST00000416159 ATP13A3Q9H7F0 1226 aa17.74■□□□□ 0.43
PDLIM2-208ENST00000416159 CBX8Q9HC52 389 aa17.74■□□□□ 0.43
PDLIM2-208ENST00000416159 APOBEC3BQ9UH17 382 aaKnown RBP17.74■□□□□ 0.43
PDLIM2-208ENST00000416159 U3KQA8 63 aa17.74■□□□□ 0.43
PDLIM2-208ENST00000416159 CFAP69A5D8W1 941 aa17.73■□□□□ 0.43
PDLIM2-208ENST00000416159 H3BRJ5 948 aa17.73■□□□□ 0.43
PDLIM2-208ENST00000416159 MYF5P13349 255 aa17.73■□□□□ 0.43
PDLIM2-208ENST00000416159 ARL4AP40617 200 aa17.73■□□□□ 0.43
PDLIM2-208ENST00000416159 BLKP51451 505 aa17.73■□□□□ 0.43
PDLIM2-208ENST00000416159 RENBPP51606 427 aa17.73■□□□□ 0.43
PDLIM2-208ENST00000416159 UBASH3AP57075 661 aa17.73■□□□□ 0.43
PDLIM2-208ENST00000416159 SEMG2Q02383 582 aa17.73■□□□□ 0.43
PDLIM2-208ENST00000416159 PPARDQ03181 441 aa17.73■□□□□ 0.43
PDLIM2-208ENST00000416159 BCL2L1Q07817 233 aa17.73■□□□□ 0.43
PDLIM2-208ENST00000416159 DPYSQ14117 519 aa17.73■□□□□ 0.43
PDLIM2-208ENST00000416159 PIGHQ14442 188 aaPredicted RBP17.73■□□□□ 0.43
PDLIM2-208ENST00000416159 AGERQ15109 404 aa17.73■□□□□ 0.43
PDLIM2-208ENST00000416159 IRF4Q15306 451 aa17.73■□□□□ 0.43
PDLIM2-208ENST00000416159 DEFB133Q30KQ1 61 aa17.73■□□□□ 0.43
PDLIM2-208ENST00000416159 FAXCQ5TGI0 409 aa17.73■□□□□ 0.43
PDLIM2-208ENST00000416159 CDCP2Q5VXM1 449 aa17.73■□□□□ 0.43
PDLIM2-208ENST00000416159 HGSNATQ68CP4 663 aa17.73■□□□□ 0.43
PDLIM2-208ENST00000416159 PDZD3Q86UT5 571 aa17.73■□□□□ 0.43
PDLIM2-208ENST00000416159 RBFAQ8N0V3 343 aa17.73■□□□□ 0.43
PDLIM2-208ENST00000416159 NPWQ8N729 165 aa17.73■□□□□ 0.43
PDLIM2-208ENST00000416159 GLMNQ92990 594 aa17.73■□□□□ 0.43
PDLIM2-208ENST00000416159 IQCDQ96DY2 449 aa17.73■□□□□ 0.43
PDLIM2-208ENST00000416159 SLC13A1Q9BZW2 595 aa17.73■□□□□ 0.43
PDLIM2-208ENST00000416159 ABCG4Q9H172 646 aa17.73■□□□□ 0.43
PDLIM2-208ENST00000416159 ATP8A1Q9Y2Q0 1164 aa17.73■□□□□ 0.43
PDLIM2-208ENST00000416159 COQ6Q9Y2Z9 468 aa17.73■□□□□ 0.43
PDLIM2-208ENST00000416159 ASXL3Q9C0F0 2248 aa17.73■□□□□ 0.43
PDLIM2-208ENST00000416159 LRRK1Q38SD2 2015 aa17.72■□□□□ 0.43
PDLIM2-208ENST00000416159 SYCE3A1L190 88 aa17.72■□□□□ 0.43
PDLIM2-208ENST00000416159 LZTS3O60299 673 aaPredicted RBP17.72■□□□□ 0.43
PDLIM2-208ENST00000416159 ANXA6P08133 673 aa17.72■□□□□ 0.43
PDLIM2-208ENST00000416159 C6P13671 934 aa17.72■□□□□ 0.43
PDLIM2-208ENST00000416159 PBX1P40424 430 aa17.72■□□□□ 0.43
PDLIM2-208ENST00000416159 RGRP47804 291 aa17.72■□□□□ 0.43
PDLIM2-208ENST00000416159 POLR2LP62875 67 aaKnown RBP17.72■□□□□ 0.43
PDLIM2-208ENST00000416159 DPYSL2Q16555 572 aa17.72■□□□□ 0.43
PDLIM2-208ENST00000416159 WSCD2Q2TBF2 565 aa17.72■□□□□ 0.43
PDLIM2-208ENST00000416159 PRRT3Q5FWE3 981 aa17.72■□□□□ 0.43
PDLIM2-208ENST00000416159 ARHGAP36Q6ZRI8 547 aa17.72■□□□□ 0.43
PDLIM2-208ENST00000416159 LUZP1Q86V48 1076 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms