RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 SLCO4A1Q96BD0 722 aa9.88□□□□□ -0.83
CD44-206ENST00000415148 ZNF597Q96LX8 424 aa9.88□□□□□ -0.83
CD44-206ENST00000415148 PPP1R10Q96QC0 940 aaKnown RBP9.88□□□□□ -0.83
CD44-206ENST00000415148 OMDQ99983 421 aa9.88□□□□□ -0.83
CD44-206ENST00000415148 GLOD4Q9HC38 313 aa9.88□□□□□ -0.83
CD44-206ENST00000415148 UBP1Q9NZI7 540 aa9.88□□□□□ -0.83
CD44-206ENST00000415148 TCAF1Q9Y4C2 921 aa9.88□□□□□ -0.83
CD44-206ENST00000415148 AP4S1Q9Y587 144 aa9.88□□□□□ -0.83
CD44-206ENST00000415148 TLL2Q9Y6L7 1015 aa9.88□□□□□ -0.83
CD44-206ENST00000415148 TANC1Q9C0D5 1861 aa9.87□□□□□ -0.83
CD44-206ENST00000415148 HHLA1C9JL84 531 aa9.87□□□□□ -0.83
CD44-206ENST00000415148 TRIM24O15164 1050 aa9.87□□□□□ -0.83
CD44-206ENST00000415148 MATN3O15232 486 aa9.87□□□□□ -0.83
CD44-206ENST00000415148 PFDN1O60925 122 aa9.87□□□□□ -0.83
CD44-206ENST00000415148 F2P00734 622 aa9.87□□□□□ -0.83
CD44-206ENST00000415148 USP17L7P0C7H9 530 aa9.87□□□□□ -0.83
CD44-206ENST00000415148 PSMC3P17980 439 aa9.87□□□□□ -0.83
CD44-206ENST00000415148 ADRA1AP35348 466 aa9.87□□□□□ -0.83
CD44-206ENST00000415148 CD151P48509 253 aa9.87□□□□□ -0.83
CD44-206ENST00000415148 ATP4BP51164 291 aa9.87□□□□□ -0.83
CD44-206ENST00000415148 NDST2P52849 883 aa9.87□□□□□ -0.83
CD44-206ENST00000415148 CRYBB1P53674 252 aaPredicted RBP9.87□□□□□ -0.83
CD44-206ENST00000415148 SLC12A2P55011 1212 aa9.87□□□□□ -0.83
CD44-206ENST00000415148 ADAM17P78536 824 aa9.87□□□□□ -0.83
CD44-206ENST00000415148 FAM83EQ2M2I3 478 aa9.87□□□□□ -0.83
CD44-206ENST00000415148 KIAA0930Q6ICG6 404 aaPredicted RBP9.87□□□□□ -0.83
CD44-206ENST00000415148 FAM45BPQ6NSW5 357 aa9.87□□□□□ -0.83
CD44-206ENST00000415148 MFSD6LQ8IWD5 586 aa9.87□□□□□ -0.83
CD44-206ENST00000415148 CCNYL1Q8N7R7 359 aa9.87□□□□□ -0.83
CD44-206ENST00000415148 ZMIZ2Q8NF64 920 aa9.87□□□□□ -0.83
CD44-206ENST00000415148 FAM45AQ8TCE6 357 aa9.87□□□□□ -0.83
CD44-206ENST00000415148 UHRF1Q96T88 793 aaPredicted RBP9.87□□□□□ -0.83
CD44-206ENST00000415148 HAUS8Q9BT25 410 aa9.87□□□□□ -0.83
CD44-206ENST00000415148 OSBPL11Q9BXB4 747 aa9.87□□□□□ -0.83
CD44-206ENST00000415148 POMKQ9H5K3 350 aa9.87□□□□□ -0.83
CD44-206ENST00000415148 CSNK1G1Q9HCP0 422 aa9.87□□□□□ -0.83
CD44-206ENST00000415148 TREX1Q9NSU2 369 aa9.87□□□□□ -0.83
CD44-206ENST00000415148 SLC38A7Q9NVC3 462 aa9.87□□□□□ -0.83
CD44-206ENST00000415148 CDH9Q9ULB4 789 aa9.87□□□□□ -0.83
CD44-206ENST00000415148 TDRKHQ9Y2W6 561 aaKnown RBP9.87□□□□□ -0.83
CD44-206ENST00000415148 MRPL42Q9Y6G3 142 aaKnown RBP9.87□□□□□ -0.83
CD44-206ENST00000415148 TRMUO75648 421 aaKnown RBP9.87□□□□□ -0.83
CD44-206ENST00000415148 RBP1P09455 135 aa9.87□□□□□ -0.83
CD44-206ENST00000415148 PFKPQ01813 784 aa9.87□□□□□ -0.83
CD44-206ENST00000415148 CTBP1Q13363 440 aa9.87□□□□□ -0.83
CD44-206ENST00000415148 SLC14A2Q15849 920 aa9.87□□□□□ -0.83
CD44-206ENST00000415148 AGAP9Q5VTM2 703 aa9.87□□□□□ -0.83
CD44-206ENST00000415148 HMBOX1Q6NT76 420 aa9.87□□□□□ -0.83
CD44-206ENST00000415148 ESRP1Q6NXG1 681 aaKnown RBP9.87□□□□□ -0.83
CD44-206ENST00000415148 BHLHA9Q7RTU4 235 aa9.87□□□□□ -0.83
CD44-206ENST00000415148 CTU1Q7Z7A3 348 aaKnown RBP9.87□□□□□ -0.83
CD44-206ENST00000415148 GALNT7Q86SF2 657 aa9.87□□□□□ -0.83
CD44-206ENST00000415148 LRRC49Q8IUZ0 686 aa9.87□□□□□ -0.83
CD44-206ENST00000415148 SLC22A9Q8IVM8 553 aa9.87□□□□□ -0.83
CD44-206ENST00000415148 DENND6AQ8IWF6 608 aa9.87□□□□□ -0.83
CD44-206ENST00000415148 TXNDC5Q8NBS9 432 aaKnown RBP9.87□□□□□ -0.83
CD44-206ENST00000415148 CALML6Q8TD86 181 aa9.87□□□□□ -0.83
CD44-206ENST00000415148 PPP1R13LQ8WUF5 828 aa9.87□□□□□ -0.83
CD44-206ENST00000415148 HEXDCQ8WVB3 486 aa9.87□□□□□ -0.83
CD44-206ENST00000415148 SMARCD1Q96GM5 515 aa9.87□□□□□ -0.83
CD44-206ENST00000415148 ELMO2Q96JJ3 720 aa9.87□□□□□ -0.83
CD44-206ENST00000415148 SENP8Q96LD8 212 aa9.87□□□□□ -0.83
CD44-206ENST00000415148 EFHD1Q9BUP0 239 aa9.87□□□□□ -0.83
CD44-206ENST00000415148 TIMMDC1Q9NPL8 285 aa9.87□□□□□ -0.83
CD44-206ENST00000415148 ADA2Q9NZK5 511 aa9.87□□□□□ -0.83
CD44-206ENST00000415148 CD300AQ9UGN4 299 aa9.87□□□□□ -0.83
CD44-206ENST00000415148 SFMBT1Q9UHJ3 866 aa9.87□□□□□ -0.83
CD44-206ENST00000415148 IPO11Q9UI26 975 aaKnown RBP9.87□□□□□ -0.83
CD44-206ENST00000415148 SLC45A1Q9Y2W3 748 aa9.87□□□□□ -0.83
CD44-206ENST00000415148 FIS1Q9Y3D6 152 aa9.87□□□□□ -0.83
CD44-206ENST00000415148 TCRBV3S1A0A5B6 114 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 HEATR9A2RTY3 570 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 NEMP2A6NFY4 417 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 E7ENX8 843 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 PTGESO14684 152 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 UBDO15205 165 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 FGF10O15520 208 aaPredicted RBP9.86□□□□□ -0.83
CD44-206ENST00000415148 ZSCAN9O15535 394 aaPredicted RBP9.86□□□□□ -0.83
CD44-206ENST00000415148 IPO13O94829 963 aaKnown RBP9.86□□□□□ -0.83
CD44-206ENST00000415148 ARNTP27540 789 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 SLC7A1P30825 629 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 SLC1A2P43004 574 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 ADARP55265 1226 aaKnown RBP9.86□□□□□ -0.83
CD44-206ENST00000415148 TAS2R39P59534 338 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 MPP1Q00013 466 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 SULT2A1Q06520 285 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 PDAP1Q13442 181 aaKnown RBP9.86□□□□□ -0.83
CD44-206ENST00000415148 TMED1Q13445 227 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 ANKDD1AQ495B1 522 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 MTX3Q5HYI7 312 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 TECRLQ5HYJ1 363 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 PITRM1Q5JRX3 1037 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 TIGD7Q6NT04 549 aaPredicted RBP9.86□□□□□ -0.83
CD44-206ENST00000415148 KLC3Q6P597 504 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 KLHL35Q6PF15 583 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 CNSTQ6PJW8 725 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 CYP2R1Q6VVX0 501 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 ARRDC4Q8NCT1 418 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 TRPC4APQ8TEL6 797 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 TMEM40Q8WWA1 233 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms