RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 UNC93B1Q9H1C4 597 aa12.05□□□□□ -0.48
PTPRF-205ENST00000414879 ARAP2Q8WZ64 1704 aa12.05□□□□□ -0.48
PTPRF-205ENST00000414879 ANKDD1BA6NHY2 528 aa12.04□□□□□ -0.48
PTPRF-205ENST00000414879 E9PBE3 544 aa12.04□□□□□ -0.48
PTPRF-205ENST00000414879 KLHL41O60662 606 aa12.04□□□□□ -0.48
PTPRF-205ENST00000414879 IGFBP4P22692 258 aa12.04□□□□□ -0.48
PTPRF-205ENST00000414879 TLE2Q04725 743 aa12.04□□□□□ -0.48
PTPRF-205ENST00000414879 SQLEQ14534 574 aa12.04□□□□□ -0.48
PTPRF-205ENST00000414879 DMC1Q14565 340 aa12.04□□□□□ -0.48
PTPRF-205ENST00000414879 TMEM259Q4ZIN3 620 aa12.04□□□□□ -0.48
PTPRF-205ENST00000414879 INTS11Q5TA45 600 aaKnown RBP12.04□□□□□ -0.48
PTPRF-205ENST00000414879 LAYNQ6UX15 382 aa12.04□□□□□ -0.48
PTPRF-205ENST00000414879 TAC4Q86UU9 113 aa12.04□□□□□ -0.48
PTPRF-205ENST00000414879 MAB21L3Q8N8X9 362 aa12.04□□□□□ -0.48
PTPRF-205ENST00000414879 KREMEN2Q8NCW0 462 aa12.04□□□□□ -0.48
PTPRF-205ENST00000414879 ACE2Q9BYF1 805 aaPredicted RBP12.04□□□□□ -0.48
PTPRF-205ENST00000414879 OSBPL6Q9BZF3 934 aa12.04□□□□□ -0.48
PTPRF-205ENST00000414879 ARHGAP39Q9C0H5 1083 aa12.04□□□□□ -0.48
PTPRF-205ENST00000414879 PHPT1Q9NRX4 125 aaPredicted RBP12.04□□□□□ -0.48
PTPRF-205ENST00000414879 RNF19AQ9NV58 838 aa12.04□□□□□ -0.48
PTPRF-205ENST00000414879 IL1RAPL1Q9NZN1 696 aa12.04□□□□□ -0.48
PTPRF-205ENST00000414879 SLC27A6Q9Y2P4 619 aa12.04□□□□□ -0.48
PTPRF-205ENST00000414879 MYBPHLA2RUH7 354 aa12.04□□□□□ -0.48
PTPRF-205ENST00000414879 CCDC154A6NI56 674 aa12.04□□□□□ -0.48
PTPRF-205ENST00000414879 ANKRD65E5RJM6 399 aa12.04□□□□□ -0.48
PTPRF-205ENST00000414879 DGKIO75912 1065 aa12.04□□□□□ -0.48
PTPRF-205ENST00000414879 ETS1P14921 441 aa12.04□□□□□ -0.48
PTPRF-205ENST00000414879 TLX1P31314 330 aaPredicted RBP12.04□□□□□ -0.48
PTPRF-205ENST00000414879 NEK3P51956 506 aa12.04□□□□□ -0.48
PTPRF-205ENST00000414879 PNLIPRP1P54315 467 aa12.04□□□□□ -0.48
PTPRF-205ENST00000414879 CDC16Q13042 620 aa12.04□□□□□ -0.48
PTPRF-205ENST00000414879 GDF6Q6KF10 455 aaPredicted RBP12.04□□□□□ -0.48
PTPRF-205ENST00000414879 TRABD2AQ86V40 505 aa12.04□□□□□ -0.48
PTPRF-205ENST00000414879 ASZ1Q8WWH4 475 aa12.04□□□□□ -0.48
PTPRF-205ENST00000414879 MED8Q96G25 268 aa12.04□□□□□ -0.48
PTPRF-205ENST00000414879 ZFYVE1Q9HBF4 777 aa12.04□□□□□ -0.48
PTPRF-205ENST00000414879 HAO1Q9UJM8 370 aa12.04□□□□□ -0.48
PTPRF-205ENST00000414879 FBXO10Q9UK96 956 aa12.04□□□□□ -0.48
PTPRF-205ENST00000414879 COG5Q9UP83 839 aa12.04□□□□□ -0.48
PTPRF-205ENST00000414879 ITM2BQ9Y287 266 aa12.04□□□□□ -0.48
PTPRF-205ENST00000414879 LRIG2O94898 1065 aa12.04□□□□□ -0.48
PTPRF-205ENST00000414879 ELFN1P0C7U0 828 aa12.04□□□□□ -0.48
PTPRF-205ENST00000414879 TFE3P19532 575 aaPredicted RBP12.04□□□□□ -0.48
PTPRF-205ENST00000414879 S100A3P33764 101 aa12.04□□□□□ -0.48
PTPRF-205ENST00000414879 KRT20P35900 424 aa12.04□□□□□ -0.48
PTPRF-205ENST00000414879 ABL2P42684 1182 aa12.04□□□□□ -0.48
PTPRF-205ENST00000414879 CACNG1Q06432 222 aa12.04□□□□□ -0.48
PTPRF-205ENST00000414879 RAET1GQ6H3X3 334 aa12.04□□□□□ -0.48
PTPRF-205ENST00000414879 FAM126BQ8IXS8 530 aa12.04□□□□□ -0.48
PTPRF-205ENST00000414879 KCNV2Q8TDN2 545 aa12.04□□□□□ -0.48
PTPRF-205ENST00000414879 NSMCE2Q96MF7 247 aa12.04□□□□□ -0.48
PTPRF-205ENST00000414879 SCHIP1Q9P0W5 487 aaPredicted RBP12.04□□□□□ -0.48
PTPRF-205ENST00000414879 KCNE2Q9Y6J6 123 aa12.04□□□□□ -0.48
PTPRF-205ENST00000414879 IGKV6D-21A0A0A0MT36 114 aa12.04□□□□□ -0.48
PTPRF-205ENST00000414879 HDAC3O15379 428 aa12.04□□□□□ -0.48
PTPRF-205ENST00000414879 PGS1Q32NB8 556 aa12.04□□□□□ -0.48
PTPRF-205ENST00000414879 CAPRIN2Q6IMN6 1127 aaKnown RBP12.04□□□□□ -0.48
PTPRF-205ENST00000414879 PDE12Q6L8Q7 609 aaKnown RBP12.04□□□□□ -0.48
PTPRF-205ENST00000414879 CES3Q6UWW8 571 aa12.04□□□□□ -0.48
PTPRF-205ENST00000414879 TERB1Q8NA31 727 aa12.04□□□□□ -0.48
PTPRF-205ENST00000414879 CMASQ8NFW8 434 aaPredicted RBP12.04□□□□□ -0.48
PTPRF-205ENST00000414879 CD101Q93033 1021 aa12.04□□□□□ -0.48
PTPRF-205ENST00000414879 KCTD14Q9BQ13 255 aaPredicted RBP12.04□□□□□ -0.48
PTPRF-205ENST00000414879 BDH2Q9BUT1 245 aa12.04□□□□□ -0.48
PTPRF-205ENST00000414879 CDH19Q9H159 772 aa12.04□□□□□ -0.48
PTPRF-205ENST00000414879 HSD3B7Q9H2F3 369 aa12.04□□□□□ -0.48
PTPRF-205ENST00000414879 IL1RL2Q9HB29 575 aa12.04□□□□□ -0.48
PTPRF-205ENST00000414879 SYBUQ9NX95 663 aa12.04□□□□□ -0.48
PTPRF-205ENST00000414879 PCDHB9Q9Y5E1 797 aa12.04□□□□□ -0.48
PTPRF-205ENST00000414879 MRASO14807 208 aa12.03□□□□□ -0.48
PTPRF-205ENST00000414879 GUCA1CO95843 209 aa12.03□□□□□ -0.48
PTPRF-205ENST00000414879 CCL5P13501 91 aa12.03□□□□□ -0.48
PTPRF-205ENST00000414879 TFEBP19484 476 aa12.03□□□□□ -0.48
PTPRF-205ENST00000414879 PPIBP23284 216 aaKnown RBP12.03□□□□□ -0.48
PTPRF-205ENST00000414879 CYB5D1Q6P9G0 228 aa12.03□□□□□ -0.48
PTPRF-205ENST00000414879 IQCKQ8N0W5 287 aa12.03□□□□□ -0.48
PTPRF-205ENST00000414879 IKZF4Q9H2S9 585 aa12.03□□□□□ -0.48
PTPRF-205ENST00000414879 BRD9Q9H8M2 597 aa12.03□□□□□ -0.48
PTPRF-205ENST00000414879 CREBZFQ9NS37 354 aa12.03□□□□□ -0.48
PTPRF-205ENST00000414879 PDP2Q9P2J9 529 aa12.03□□□□□ -0.48
PTPRF-205ENST00000414879 NRP1O14786 923 aa12.03□□□□□ -0.48
PTPRF-205ENST00000414879 PER2O15055 1255 aa12.03□□□□□ -0.48
PTPRF-205ENST00000414879 MFSD11O43934 449 aa12.03□□□□□ -0.48
PTPRF-205ENST00000414879 OGNP20774 298 aaKnown RBP12.03□□□□□ -0.48
PTPRF-205ENST00000414879 ME2P23368 584 aa12.03□□□□□ -0.48
PTPRF-205ENST00000414879 CDH5P33151 784 aaPredicted RBP12.03□□□□□ -0.48
PTPRF-205ENST00000414879 CRHR1P34998 444 aa12.03□□□□□ -0.48
PTPRF-205ENST00000414879 SPAM1P38567 509 aa12.03□□□□□ -0.48
PTPRF-205ENST00000414879 IRX1P78414 480 aaPredicted RBP12.03□□□□□ -0.48
PTPRF-205ENST00000414879 DSG1Q02413 1049 aa12.03□□□□□ -0.48
PTPRF-205ENST00000414879 TBL3Q12788 808 aaKnown RBP12.03□□□□□ -0.48
PTPRF-205ENST00000414879 SDHAF4Q5VUM1 108 aa12.03□□□□□ -0.48
PTPRF-205ENST00000414879 TAPT1Q6NXT6 567 aa12.03□□□□□ -0.48
PTPRF-205ENST00000414879 APTXQ7Z2E3 356 aaKnown RBP12.03□□□□□ -0.48
PTPRF-205ENST00000414879 RPAINQ86UA6 219 aa12.03□□□□□ -0.48
PTPRF-205ENST00000414879 ZBTB10Q96DT7 871 aa12.03□□□□□ -0.48
PTPRF-205ENST00000414879 TM6SF2Q9BZW4 377 aa12.03□□□□□ -0.48
PTPRF-205ENST00000414879 ADNPQ9H2P0 1102 aa12.03□□□□□ -0.48
PTPRF-205ENST00000414879 PADI4Q9UM07 663 aa12.03□□□□□ -0.48
PTPRF-205ENST00000414879 PIPSLA2A3N6 862 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms