RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 FP248Q71RG6 208 aaPredicted RBP-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 SPATC1Q76KD6 591 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 OVCH2Q7RTZ1 564 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 CCDC71Q8IV32 467 aaPredicted RBP-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 UNC5CLQ8IV45 518 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 LAS2Q8IYD9 372 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 SPICE1Q8N0Z3 855 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 CADM3Q8N126 398 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 RNF175Q8N4F7 328 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 ZNF709Q8N972 641 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 OR13A1Q8NGR1 328 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 ZNF563Q8TA94 476 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 ZNF461Q8TAF7 563 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 AFAP1L1Q8TED9 768 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 CPT1BQ92523 772 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 ZMYND19Q96E35 227 aaPredicted RBP-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 OMA1Q96E52 524 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 TSNARE1Q96NA8 513 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 ZNF582Q96NG8 517 aaPredicted RBP-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 NRIP2Q9BQI9 281 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 FAM103A1Q9BTL3 118 aaKnown RBP-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 TRIM31Q9BZY9 425 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 TKTL2Q9H0I9 626 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 VCXQ9H320 206 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 COG4Q9H9E3 785 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 MED4Q9NPJ6 270 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 TREX1Q9NSU2 369 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 HCN3Q9P1Z3 774 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 ASIC3Q9UHC3 531 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 CCNL1Q9UK58 526 aaPredicted RBP-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 PCDHB10Q9UN67 800 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 CDYLQ9Y232 598 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 LRCH1Q9Y2L9 728 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 KLK5Q9Y337 293 aaPredicted RBP-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 RIPK3Q9Y572 518 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 SELENOKQ9Y6D0 94 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 PDE4DIPQ5VU43 2346 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 MDC1Q14676 2089 aaKnown RBP-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 SPATA31A3Q5VYP0 1347 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 CARMIL3Q8ND23 1372 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 DNAH11Q96DT5 4516 aa-1.48□□□□□ -2.65
RNU4-88P-201ENST00000411220 AKAP6Q13023 2319 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 DNAH9Q9NYC9 4486 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 CENPEQ02224 2701 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 ZSWIM8A7E2V4 1837 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 ATMQ13315 3056 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 GBF1Q92538 1859 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 IGLV1-50A0A075B6I6 118 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 IGHV4OR15-8A0A075B7B6 117 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 A0A1W2PR48 441 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 ZNF320A2RRD8 509 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 CDHR4A6H8M9 788 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 MBD3L4A6NDZ8 208 aaPredicted RBP-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 MBD3L3A6NE82 208 aaPredicted RBP-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 MBD3L5A6NJ08 208 aaPredicted RBP-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 H3BRB1 525 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 PDXKO00764 312 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 DCLK1O15075 740 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 NKX2-8O15522 239 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 TBX1O43435 398 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 RAD21O60216 631 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 GPRIN2O60269 458 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 ZEB2O60315 1214 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 OR10H2O60403 315 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 TLR5O60602 858 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 PIAS2O75928 621 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 TOXO94900 526 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 PDHA1P08559 390 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 GNAO1P09471 354 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 RRASP10301 218 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 NAT2P11245 290 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 MYCLP12524 364 aaPredicted RBP-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 ATP1B2P14415 290 aaPredicted RBP-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 JAK1P23458 1154 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 PTPN7P35236 360 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 SOX3P41225 446 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 FNTAP49354 379 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 TKTL1P51854 596 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 PMS2P54278 862 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 LACTBP83111 547 aaPredicted RBP-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 MEF2AQ02078 507 aaPredicted RBP-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 GPR18Q14330 331 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 TMEM132BQ14DG7 1078 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 LARS2Q15031 903 aaKnown RBP-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 PTGES3Q15185 160 aaKnown RBP-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 DLGAP5Q15398 846 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 STK11Q15831 433 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 DCAF6Q58WW2 860 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 TTC38Q5R3I4 469 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 MEI1Q5TIA1 1274 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 YOD1Q5VVQ6 348 aaPredicted RBP-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 RAET1LQ5VY80 246 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 Q5XG85 94 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 TMEM198Q66K66 360 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 FAAH2Q6GMR7 532 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 TRNP1Q6NT89 227 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 ZDHHC24Q6UX98 284 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 SCARA5Q6ZMJ2 495 aa-1.49□□□□□ -2.65
RNU4-88P-201ENST00000411220 Q6ZRU5 148 aa-1.49□□□□□ -2.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms