RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 C12orf50Q8NA57 414 aaPredicted RBP24.07■■□□□ 1.44
UBE2E3-202ENST00000410062 TRIM58Q8NG06 486 aa24.07■■□□□ 1.44
UBE2E3-202ENST00000410062 CEP76Q8TAP6 659 aa24.07■■□□□ 1.44
UBE2E3-202ENST00000410062 HCAR2Q8TDS4 363 aa24.07■■□□□ 1.44
UBE2E3-202ENST00000410062 KLK6Q92876 244 aa24.07■■□□□ 1.44
UBE2E3-202ENST00000410062 ECHDC3Q96DC8 303 aa24.07■■□□□ 1.44
UBE2E3-202ENST00000410062 SUSD2Q9UGT4 822 aa24.07■■□□□ 1.44
UBE2E3-202ENST00000410062 AMACRQ9UHK6 382 aa24.07■■□□□ 1.44
UBE2E3-202ENST00000410062 ZFR2Q9UPR6 939 aaKnown RBP24.07■■□□□ 1.44
UBE2E3-202ENST00000410062 ATP8A1Q9Y2Q0 1164 aa24.07■■□□□ 1.44
UBE2E3-202ENST00000410062 NEMP1O14524 444 aa24.06■■□□□ 1.44
UBE2E3-202ENST00000410062 XPAP23025 273 aaPredicted RBP24.06■■□□□ 1.44
UBE2E3-202ENST00000410062 OTUD4Q01804 1114 aaKnown RBP24.06■■□□□ 1.44
UBE2E3-202ENST00000410062 RPS6KA1Q15418 735 aa24.06■■□□□ 1.44
UBE2E3-202ENST00000410062 UGP2Q16851 508 aa24.06■■□□□ 1.44
UBE2E3-202ENST00000410062 SEL1L3Q68CR1 1132 aa24.06■■□□□ 1.44
UBE2E3-202ENST00000410062 NEK5Q6P3R8 708 aa24.06■■□□□ 1.44
UBE2E3-202ENST00000410062 BRAT1Q6PJG6 821 aa24.06■■□□□ 1.44
UBE2E3-202ENST00000410062 HORMAD1Q86X24 394 aa24.06■■□□□ 1.44
UBE2E3-202ENST00000410062 REXO1L1PQ8IX06 675 aa24.06■■□□□ 1.44
UBE2E3-202ENST00000410062 ACTL9Q8TC94 416 aa24.06■■□□□ 1.44
UBE2E3-202ENST00000410062 PDCD6IPQ8WUM4 868 aaKnown RBP24.06■■□□□ 1.44
UBE2E3-202ENST00000410062 FAM118BQ9BPY3 351 aa24.06■■□□□ 1.44
UBE2E3-202ENST00000410062 TM9SF3Q9HD45 589 aa24.06■■□□□ 1.44
UBE2E3-202ENST00000410062 RXFP3Q9NSD7 469 aa24.06■■□□□ 1.44
UBE2E3-202ENST00000410062 A0A1B0GTW7 788 aa24.05■■□□□ 1.44
UBE2E3-202ENST00000410062 AREL1O15033 823 aa24.05■■□□□ 1.44
UBE2E3-202ENST00000410062 PRKCGP05129 697 aa24.05■■□□□ 1.44
UBE2E3-202ENST00000410062 NIPAL4Q0D2K0 466 aa24.05■■□□□ 1.44
UBE2E3-202ENST00000410062 CCDC173Q0VFZ6 552 aa24.05■■□□□ 1.44
UBE2E3-202ENST00000410062 TRAF2Q12933 501 aa24.05■■□□□ 1.44
UBE2E3-202ENST00000410062 IHHQ14623 411 aa24.05■■□□□ 1.44
UBE2E3-202ENST00000410062 NOMO1Q15155 1222 aa24.05■■□□□ 1.44
UBE2E3-202ENST00000410062 RALGPS1Q5JS13 557 aa24.05■■□□□ 1.44
UBE2E3-202ENST00000410062 ALG1LQ6GMV1 187 aa24.05■■□□□ 1.44
UBE2E3-202ENST00000410062 SLC23A3Q6PIS1 610 aa24.05■■□□□ 1.44
UBE2E3-202ENST00000410062 RABEPKQ7Z6M1 372 aa24.05■■□□□ 1.44
UBE2E3-202ENST00000410062 PRPF39Q86UA1 669 aaKnown RBP24.05■■□□□ 1.44
UBE2E3-202ENST00000410062 ARRDC2Q8TBH0 407 aa24.05■■□□□ 1.44
UBE2E3-202ENST00000410062 AGAP3Q96P47 875 aa24.05■■□□□ 1.44
UBE2E3-202ENST00000410062 C10orf88Q9H8K7 445 aa24.05■■□□□ 1.44
UBE2E3-202ENST00000410062 HAUS2Q9NVX0 235 aa24.05■■□□□ 1.44
UBE2E3-202ENST00000410062 TRMT1Q9NXH9 659 aaKnown RBP24.05■■□□□ 1.44
UBE2E3-202ENST00000410062 UPK3BL1B0FP48 263 aa24.04■■□□□ 1.44
UBE2E3-202ENST00000410062 UPK3BL2E5RIL1 263 aa24.04■■□□□ 1.44
UBE2E3-202ENST00000410062 ZSCAN12O43309 604 aa24.04■■□□□ 1.44
UBE2E3-202ENST00000410062 SERPINF2P08697 491 aa24.04■■□□□ 1.44
UBE2E3-202ENST00000410062 SEMG2Q02383 582 aa24.04■■□□□ 1.44
UBE2E3-202ENST00000410062 ZNF284Q2VY69 593 aa24.04■■□□□ 1.44
UBE2E3-202ENST00000410062 FEM1CQ96JP0 617 aa24.04■■□□□ 1.44
UBE2E3-202ENST00000410062 SLC6A18Q96N87 628 aa24.04■■□□□ 1.44
UBE2E3-202ENST00000410062 QKIQ96PU8 341 aaKnown RBP eCLIP24.04■■□□□ 1.444e-9■■■■□ 25.4
UBE2E3-202ENST00000410062 NUSAP1Q9BXS6 441 aaKnown RBP24.04■■□□□ 1.44
UBE2E3-202ENST00000410062 PCDH12Q9NPG4 1184 aa24.04■■□□□ 1.44
UBE2E3-202ENST00000410062 TPX2Q9ULW0 747 aaKnown RBP24.04■■□□□ 1.44
UBE2E3-202ENST00000410062 SLC6A14Q9UN76 642 aa24.04■■□□□ 1.44
UBE2E3-202ENST00000410062 TRPM6Q9BX84 2022 aa24.04■■□□□ 1.44
UBE2E3-202ENST00000410062 LNP1A1A4G5 178 aa24.03■■□□□ 1.44
UBE2E3-202ENST00000410062 H7C0C1 242 aa24.03■■□□□ 1.44
UBE2E3-202ENST00000410062 WNT9AO14904 365 aa24.03■■□□□ 1.44
UBE2E3-202ENST00000410062 SLC31A1O15431 190 aa24.03■■□□□ 1.44
UBE2E3-202ENST00000410062 HTRA2O43464 458 aaPredicted RBP24.03■■□□□ 1.44
UBE2E3-202ENST00000410062 TSPAN6O43657 245 aa24.03■■□□□ 1.44
UBE2E3-202ENST00000410062 GDF9O60383 454 aa24.03■■□□□ 1.44
UBE2E3-202ENST00000410062 SOCS5O75159 536 aa24.03■■□□□ 1.44
UBE2E3-202ENST00000410062 PRLRP16471 622 aa24.03■■□□□ 1.44
UBE2E3-202ENST00000410062 ATP5OP48047 213 aa24.03■■□□□ 1.44
UBE2E3-202ENST00000410062 AASDHQ4L235 1098 aaPredicted RBP24.03■■□□□ 1.44
UBE2E3-202ENST00000410062 TMEM259Q4ZIN3 620 aa24.03■■□□□ 1.44
UBE2E3-202ENST00000410062 LAYNQ6UX15 382 aa24.03■■□□□ 1.44
UBE2E3-202ENST00000410062 UBE2Q2Q8WVN8 375 aa24.03■■□□□ 1.44
UBE2E3-202ENST00000410062 SERAC1Q96JX3 654 aa24.03■■□□□ 1.44
UBE2E3-202ENST00000410062 CAPN10Q9HC96 672 aa24.03■■□□□ 1.44
UBE2E3-202ENST00000410062 PCDHB9Q9Y5E1 797 aa24.03■■□□□ 1.44
UBE2E3-202ENST00000410062 RAI2Q9Y5P3 530 aa24.03■■□□□ 1.44
UBE2E3-202ENST00000410062 ADAMTS9Q9P2N4 1935 aa24.03■■□□□ 1.44
UBE2E3-202ENST00000410062 TCRBV7S2A1N4TA0A589 114 aa24.03■■□□□ 1.44
UBE2E3-202ENST00000410062 HACD1B0YJ81 288 aa24.03■■□□□ 1.44
UBE2E3-202ENST00000410062 PTPN3P26045 913 aa24.03■■□□□ 1.44
UBE2E3-202ENST00000410062 CSNK1EP49674 416 aaKnown RBP24.03■■□□□ 1.44
UBE2E3-202ENST00000410062 RPS21P63220 83 aaKnown RBP24.03■■□□□ 1.44
UBE2E3-202ENST00000410062 XRCC4Q13426 336 aa24.03■■□□□ 1.44
UBE2E3-202ENST00000410062 SETMARQ53H47 684 aaPredicted RBP24.03■■□□□ 1.44
UBE2E3-202ENST00000410062 SLC45A4Q5BKX6 768 aa24.03■■□□□ 1.44
UBE2E3-202ENST00000410062 KIAA1161Q6NSJ0 714 aa24.03■■□□□ 1.44
UBE2E3-202ENST00000410062 WRAP53Q9BUR4 548 aaKnown RBP24.03■■□□□ 1.44
UBE2E3-202ENST00000410062 IGLON5A6NGN9 336 aa24.02■■□□□ 1.44
UBE2E3-202ENST00000410062 KCNK3O14649 394 aa24.02■■□□□ 1.44
UBE2E3-202ENST00000410062 RIOK3O14730 519 aaKnown RBP24.02■■□□□ 1.44
UBE2E3-202ENST00000410062 CES1P23141 567 aa24.02■■□□□ 1.44
UBE2E3-202ENST00000410062 SUOXP51687 545 aa24.02■■□□□ 1.44
UBE2E3-202ENST00000410062 AFF3P51826 1226 aaKnown RBP24.02■■□□□ 1.44
UBE2E3-202ENST00000410062 EIF3EP60228 445 aaKnown RBP24.02■■□□□ 1.44
UBE2E3-202ENST00000410062 WASHC5Q12768 1159 aa24.02■■□□□ 1.44
UBE2E3-202ENST00000410062 KLF1Q13351 362 aaPredicted RBP24.02■■□□□ 1.44
UBE2E3-202ENST00000410062 FGL2Q14314 439 aa24.02■■□□□ 1.44
UBE2E3-202ENST00000410062 TEX44Q53QW1 395 aa24.02■■□□□ 1.44
UBE2E3-202ENST00000410062 SEL1L2Q5TEA6 688 aa24.02■■□□□ 1.44
UBE2E3-202ENST00000410062 ERAP2Q6P179 960 aa24.02■■□□□ 1.44
UBE2E3-202ENST00000410062 HTR3CQ8WXA8 447 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms