RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 KCNU1A8MYU2 1149 aa16.81■□□□□ 0.28
LIMS2-208ENST00000410011 PSMD12O00232 456 aaPredicted RBP16.81■□□□□ 0.28
LIMS2-208ENST00000410011 UBDO15205 165 aa16.81■□□□□ 0.28
LIMS2-208ENST00000410011 LTA4HP09960 611 aaKnown RBP16.81■□□□□ 0.28
LIMS2-208ENST00000410011 CPT1AP50416 773 aa16.81■□□□□ 0.28
LIMS2-208ENST00000410011 TXNL4AP83876 142 aaKnown RBP16.81■□□□□ 0.28
LIMS2-208ENST00000410011 FAM110CQ1W6H9 321 aa16.81■□□□□ 0.28
LIMS2-208ENST00000410011 MGAT5BQ3V5L5 792 aa16.81■□□□□ 0.28
LIMS2-208ENST00000410011 FAM45BPQ6NSW5 357 aa16.81■□□□□ 0.28
LIMS2-208ENST00000410011 KLC3Q6P597 504 aa16.81■□□□□ 0.28
LIMS2-208ENST00000410011 B3GNT6Q6ZMB0 384 aa16.81■□□□□ 0.28
LIMS2-208ENST00000410011 HMGCLL1Q8TB92 370 aa16.81■□□□□ 0.28
LIMS2-208ENST00000410011 FAM45AQ8TCE6 357 aa16.81■□□□□ 0.28
LIMS2-208ENST00000410011 MYLPFQ96A32 169 aa16.81■□□□□ 0.28
LIMS2-208ENST00000410011 RTP3Q9BQQ7 232 aa16.81■□□□□ 0.28
LIMS2-208ENST00000410011 FSD1LQ9BXM9 530 aa16.81■□□□□ 0.28
LIMS2-208ENST00000410011 ATP13A1Q9HD20 1204 aa16.81■□□□□ 0.28
LIMS2-208ENST00000410011 CHST12Q9NRB3 414 aa16.81■□□□□ 0.28
LIMS2-208ENST00000410011 RBM22Q9NW64 420 aaKnown RBP eCLIP16.81■□□□□ 0.28
LIMS2-208ENST00000410011 DMTF1Q9Y222 760 aa16.81■□□□□ 0.28
LIMS2-208ENST00000410011 TIMM13Q9Y5L4 95 aaPredicted RBP16.81■□□□□ 0.28
LIMS2-208ENST00000410011 TCRBV3S1A0A5B6 114 aa16.81■□□□□ 0.28
LIMS2-208ENST00000410011 A8MT66 165 aa16.81■□□□□ 0.28
LIMS2-208ENST00000410011 OR6B1O95007 311 aa16.81■□□□□ 0.28
LIMS2-208ENST00000410011 CYP11A1P05108 521 aa16.81■□□□□ 0.28
LIMS2-208ENST00000410011 PAX3P23760 479 aa16.81■□□□□ 0.28
LIMS2-208ENST00000410011 NR1H2P55055 460 aa16.81■□□□□ 0.28
LIMS2-208ENST00000410011 TAF2Q6P1X5 1199 aa16.81■□□□□ 0.28
LIMS2-208ENST00000410011 METTL25Q8N6Q8 603 aa16.81■□□□□ 0.28
LIMS2-208ENST00000410011 RNF148Q8N7C7 305 aa16.81■□□□□ 0.28
LIMS2-208ENST00000410011 C3orf58Q8NDZ4 430 aa16.81■□□□□ 0.28
LIMS2-208ENST00000410011 MARK4Q96L34 752 aa16.81■□□□□ 0.28
LIMS2-208ENST00000410011 SLC25A23Q9BV35 468 aa16.81■□□□□ 0.28
LIMS2-208ENST00000410011 SUDS3Q9H7L9 328 aaPredicted RBP16.81■□□□□ 0.28
LIMS2-208ENST00000410011 SPAG4Q9NPE6 437 aa16.81■□□□□ 0.28
LIMS2-208ENST00000410011 ABCC13Q9NSE7 274 aa16.81■□□□□ 0.28
LIMS2-208ENST00000410011 FAM105AQ9NUU6 356 aa16.81■□□□□ 0.28
LIMS2-208ENST00000410011 GTSE1Q9NYZ3 720 aa16.81■□□□□ 0.28
LIMS2-208ENST00000410011 ADA2Q9NZK5 511 aa16.81■□□□□ 0.28
LIMS2-208ENST00000410011 GIT1Q9Y2X7 761 aa16.81■□□□□ 0.28
LIMS2-208ENST00000410011 Q9Y3F1 56 aa16.81■□□□□ 0.28
LIMS2-208ENST00000410011 HLA-DQB2P05538 268 aa16.8■□□□□ 0.28
LIMS2-208ENST00000410011 SNRPB2P08579 225 aaKnown RBP16.8■□□□□ 0.28
LIMS2-208ENST00000410011 SLC7A1P30825 629 aa16.8■□□□□ 0.28
LIMS2-208ENST00000410011 CCR1P32246 355 aa16.8■□□□□ 0.28
LIMS2-208ENST00000410011 CDKL1Q00532 357 aa16.8■□□□□ 0.28
LIMS2-208ENST00000410011 FASTKQ14296 549 aaKnown RBP16.8■□□□□ 0.28
LIMS2-208ENST00000410011 NADK2Q4G0N4 442 aa16.8■□□□□ 0.28
LIMS2-208ENST00000410011 IL23RQ5VWK5 629 aa16.8■□□□□ 0.28
LIMS2-208ENST00000410011 GK5Q6ZS86 529 aa16.8■□□□□ 0.28
LIMS2-208ENST00000410011 CUZD1Q86UP6 607 aa16.8■□□□□ 0.28
LIMS2-208ENST00000410011 SPATA6LQ8N4H0 392 aa16.8■□□□□ 0.28
LIMS2-208ENST00000410011 PPP1R13LQ8WUF5 828 aa16.8■□□□□ 0.28
LIMS2-208ENST00000410011 CNBD2Q96M20 576 aa16.8■□□□□ 0.28
LIMS2-208ENST00000410011 GAD1Q99259 594 aa16.8■□□□□ 0.28
LIMS2-208ENST00000410011 PKMYT1Q99640 499 aa16.8■□□□□ 0.28
LIMS2-208ENST00000410011 OSBPL11Q9BXB4 747 aa16.8■□□□□ 0.28
LIMS2-208ENST00000410011 IPO11Q9UI26 975 aaKnown RBP16.8■□□□□ 0.28
LIMS2-208ENST00000410011 CCL15-CCL14A0A0B4J2E2 113 aa16.8■□□□□ 0.28
LIMS2-208ENST00000410011 ARHGAP10A1A4S6 786 aa16.8■□□□□ 0.28
LIMS2-208ENST00000410011 E7ENX8 843 aa16.8■□□□□ 0.28
LIMS2-208ENST00000410011 FBP2O00757 339 aa16.8■□□□□ 0.28
LIMS2-208ENST00000410011 PAGE1O75459 146 aa16.8■□□□□ 0.28
LIMS2-208ENST00000410011 WISP3O95389 354 aaPredicted RBP16.8■□□□□ 0.28
LIMS2-208ENST00000410011 HNRNPLP14866 589 aaKnown RBP eCLIP16.8■□□□□ 0.28
LIMS2-208ENST00000410011 ETS2P15036 469 aa16.8■□□□□ 0.28
LIMS2-208ENST00000410011 IMPDH1P20839 514 aa16.8■□□□□ 0.28
LIMS2-208ENST00000410011 CSHL1Q14406 222 aa16.8■□□□□ 0.28
LIMS2-208ENST00000410011 CCL15Q16663 113 aa16.8■□□□□ 0.28
LIMS2-208ENST00000410011 UPP1Q16831 310 aa16.8■□□□□ 0.28
LIMS2-208ENST00000410011 TMEM259Q4ZIN3 620 aa16.8■□□□□ 0.28
LIMS2-208ENST00000410011 REP15Q6BDI9 236 aa16.8■□□□□ 0.28
LIMS2-208ENST00000410011 KDELC1Q6UW63 502 aa16.8■□□□□ 0.28
LIMS2-208ENST00000410011 RBM44Q6ZP01 1051 aaKnown RBP16.8■□□□□ 0.28
LIMS2-208ENST00000410011 CHERPQ8IWX8 916 aaKnown RBP16.8■□□□□ 0.28
LIMS2-208ENST00000410011 SLC25A51Q9H1U9 297 aa16.8■□□□□ 0.28
LIMS2-208ENST00000410011 SMOC2Q9H3U7 446 aa16.8■□□□□ 0.28
LIMS2-208ENST00000410011 TMEM181Q9P2C4 612 aa16.8■□□□□ 0.28
LIMS2-208ENST00000410011 ZNF865P0CJ78 1059 aaPredicted RBP16.79■□□□□ 0.28
LIMS2-208ENST00000410011 ODC1P11926 461 aa16.79■□□□□ 0.28
LIMS2-208ENST00000410011 C1QTNF8P60827 252 aa16.79■□□□□ 0.28
LIMS2-208ENST00000410011 PDAP1Q13442 181 aaKnown RBP16.79■□□□□ 0.28
LIMS2-208ENST00000410011 TIGD5Q53EQ6 642 aa16.79■□□□□ 0.28
LIMS2-208ENST00000410011 SAMD4BQ5PRF9 694 aaKnown RBP16.79■□□□□ 0.28
LIMS2-208ENST00000410011 C6orf52Q5T4I8 152 aa16.79■□□□□ 0.28
LIMS2-208ENST00000410011 RTL3Q8N8U3 475 aaKnown RBP16.79■□□□□ 0.28
LIMS2-208ENST00000410011 BRI3BPQ8WY22 251 aa16.79■□□□□ 0.28
LIMS2-208ENST00000410011 ATP6V1E2Q96A05 226 aa16.79■□□□□ 0.28
LIMS2-208ENST00000410011 EME1Q96AY2 570 aa16.79■□□□□ 0.28
LIMS2-208ENST00000410011 L3HYPDHQ96EM0 354 aa16.79■□□□□ 0.28
LIMS2-208ENST00000410011 HIC2Q96JB3 615 aa16.79■□□□□ 0.28
LIMS2-208ENST00000410011 SENP6Q9GZR1 1112 aaPredicted RBP16.79■□□□□ 0.28
LIMS2-208ENST00000410011 SIK2Q9H0K1 926 aa16.79■□□□□ 0.28
LIMS2-208ENST00000410011 TRPC7Q9HCX4 862 aa16.79■□□□□ 0.28
LIMS2-208ENST00000410011 VPS45Q9NRW7 570 aa16.79■□□□□ 0.28
LIMS2-208ENST00000410011 MIOSQ9NXC5 875 aa16.79■□□□□ 0.28
LIMS2-208ENST00000410011 THEGQ9P2T0 379 aa16.79■□□□□ 0.28
LIMS2-208ENST00000410011 PCDHGB4Q9UN71 923 aa16.79■□□□□ 0.28
LIMS2-208ENST00000410011 PCDHGB5Q9Y5G0 923 aa16.79■□□□□ 0.28
LIMS2-208ENST00000410011 UTRNP46939 3433 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms